New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 381484	43 (0.860)	4 (0.080)	4/318	NT	9.4%	coding (1061/1626 nt)	PP_0317	Methyl‑accepting chemotaxis transducer
	?	AE015451	= 381669	37 (0.790)					coding (876/1626 nt)	PP_0317	Methyl‑accepting chemotaxis transducer

TGCACATCACCACTCATGCGCTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGTGCCCTCTGCGCGGATGACGTGGGTCAGGTCGCCGTCGGCGACTTGCTCGGCGCATTTGAGTGCTTCTTCGATCGG  >  AE015451/381481‑381896                                                                                                                                                                                             |                                                                                                                                                                                                                                    tGCACATCACCACTCATGCGCTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCt                                                                                                                                                                                                                                    <  1:207815‑M2/190‑2 (MQ=255)     caTCACCACTCATGCGCTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCgg                                                                                                                                                                                                            <  2:911584/210‑1 (MQ=255)           cacTCATGCGCTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGc                                                                                                                                                                             >  1:131468/1‑235 (MQ=255)                aTGCGCTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGTCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTg                                                                                                                                                                       >  1:111709/1‑236 (MQ=255)                   cgcTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTgccgc                                                                                                                                                                                   >  2:347428/1‑221 (MQ=255)                   cgcTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTgg                                                                                                                                                                      >  2:744709/1‑234 (MQ=255)                        gATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGGCGGCATTCaag                                                                                                                                                                                              >  1:780574/1‑204 (MQ=255)                           cGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTgccgc                                                                                                                                                                                   >  1:901485/1‑213 (MQ=255)                           cGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGACGCCAGCTGGGTg                                                                                                                                                                   >  2:720367/1‑229 (MQ=255)                                     gTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATctg                                                                                                                                                  <  1:537634/236‑1 (MQ=255)                                                  ggTCACGACCATCACGGGTGGGGCGGCTGGCTTCACTGGAGGCTTCTGAAGGGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATcg                                                                                                                                     <  1:178162/236‑1 (MQ=255)                                                  ggTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATcg                                                                                                                                     <  1:663088/236‑1 (MQ=255)                                                    ccaCGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCtgcaggccaccgccaagctgattaccca                                                                                                                                                                                                         >  2:524078‑M2/2‑138 (MQ=255)                                                      aCGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCa                                                                                                                                 >  1:907054/1‑236 (MQ=255)                                                      aCGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCa                                                                                                                                 >  1:84332/1‑236 (MQ=255)                                                      aCGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCa                                                                                                                                 <  1:605086/236‑1 (MQ=255)                                                               aCCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGc                                                                                                                                                        <  1:265756/204‑1 (MQ=255)                                                                       aGCGGCTGGCCTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATctgctg                                                                                                                                               >  1:217614/1‑205 (MQ=255)                                                                         cGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATgcgcgc                                                                                                              <  1:744712/236‑1 (MQ=255)                                                                           tctggctTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATgcgcgc                                                                                                              <  1:3883/233‑1 (MQ=255)                                                                            ctggctTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCg                                                                                                                                                          >  2:847372/1‑189 (MQ=255)                                                                                                 gAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATgcgcg                                                                                                               >  1:504372/1‑211 (MQ=255)                                                                                                  aaGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGggcggc                                                                                      >  1:304443/1‑235 (MQ=255)                                                                                                        tCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCTCGCAGc                                                                                                                               >  1:231902/1‑188 (MQ=255)                                                                                                        tCACGGCAGTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTAt                                                                                                                                       <  1:410872/180‑1 (MQ=255)                                                                                                                  gcgcgcCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAgg                                                                                                                                          <  2:232343/167‑1 (MQ=255)                                                                                                                    gcgcCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCACTCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTggg                                                                                                                                                                     >  2:126752/1‑138 (MQ=255)                                                                                                                    gcgcCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGt                                                                             <  1:257207/226‑1 (MQ=255)                                                                                                                         aCTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGc                                                                                                                                                        >  1:820042/1‑146 (MQ=255)                                                                                                                         aCTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGc                                                                                                                                                        <  2:820039/146‑1 (MQ=255)                                                                                                                               tcCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGTGCCctct                                                                      <  1:429649/222‑1 (MQ=255)                                                                                                                                        cTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTtcgt                                                                                 >  2:239779/1‑202 (MQ=255)                                                                                                                                         tGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCtgcaggccaccgccaagctgattacccacctggcagaacagtcgcgcgacattggcaaggtgcttgacgtgatccgtggcctggccgaccagaccaacctgctggcgctcaacgcagccatcgaagccgcgcgggccggtgaagcgggccgtggttttgccgtggtcgccgatgaagtgcggg                                              <  1:534450‑M2/236‑184 (MQ=255)                                                                                                                                         tGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCtgcaggccaccgccaagctgattacccacctggcagaacagtcgcgcgacataggcaaggtgcttgacgtgatccgtggcctggccgaccagaccaacctgctggcgctcaacgcagccatcgaagccgcgcgggccggtgaagcgggccgtggttttgccgtggtcgccgatgaagtgc                                                 >  2:534447‑M2/1‑53 (MQ=255)                                                                                                                                                        cTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGTGCCCTCTGcgcg                                                                 >  1:893727/1‑202 (MQ=255)                                                                                                                                                         tGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCtt                                                                                    >  1:142042/1‑182 (MQ=255)                                                                                                                                                         tGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGTGCCCTCTGCGCGGATGACGt                                                         >  1:235834/1‑209 (MQ=255)                                                                                                                                                            aGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCtgcaggccaccgccaagctgattacccacctggcagaacagtcgcgcgacattggcaaggtgcttgacgtgatccgtggcctggccgaccagaccaacctgctggcgctcaacgcagccatcgaagccgcgc                                                                                                 <  1:844393‑M2/166‑133 (MQ=255)                                                                                                                                                             gTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCatg                                                                                                 >  2:547237/1‑163 (MQ=255)                                                                                                                                                             gTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCatg                                                                                                 <  1:547240/165‑3 (MQ=255)                                                                                                                                                              tGGCTGCCTGTTCAATCTCATTGTTCTGCGGCTGCCGGCCACGGGCACTTTGGTTGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGAt                                                                                                                                                     <  2:583221/112‑1 (MQ=255)                                                                                                                                                                                     ttCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGTGCCCTCTGCGCGGATGACGTGGGTCAGGGCGCCGTCGGCGACTTGCTCGGCGCATTTGAGTGCTTCTTCGATCgg  >  1:126000/1‑236 (MQ=255)                                                                                                                                                                                             |                                                                                                                                                                                                                                    TGCACATCACCACTCATGCGCTCGATCGCACCCACGGTTTCCATCACCAGGTCACGACCATCACCGGTGGAGCGGCTGGCTTCACTGGAGGCTTCTGAAGTGCTCACGGCATTGCGCGCCACTTCTTCCACCGCACTGGTCATTTCAGTGACTGCAGTGGCGGCCTGTTCAATCTCATTGTTCTGCTGCTGCAGGCCACGGGCACTTTCGTCGGTGACGGCATTCAACTCTTCTGCCGCCGAGGCCAGCTGGGTGGCGGAGCCGGCGATCTGCTGCAAGGTATCGCGCAGCTTGTCCTGCATGCGCGCCATGGCGCGCAACAGCCGGGCGGCTTCGTCGGTGCCCTCTGCGCGGATGACGTGGGTCAGGTCGCCGTCGGCGACTTGCTCGGCGCATTTGAGTGCTTCTTCGATCGG  >  AE015451/381481‑381896

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.