New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 10623564 (0.740)7 (0.090) 7/338 NT 10.0% coding (102/1518 nt) PP_0101 putative sulfate transporter
?AE015451 = 106261 65 (0.800)coding (128/1518 nt) PP_0101 putative sulfate transporter

AATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/106002‑106235
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccgccgATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGTGGGCACGTTTGCCCCTGACA  <  AE015451/106261‑106055
                                                                                                                                                                                                                                                                                                                                                                                                                                                         
AATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCG                                                                                                                                                                                                                 <  2:1026508/234‑1
                                                         AGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGC                                                                                                                                                                                       <  1:171288/203‑1
                                                         AGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGC                                                                                                                                                                                       >  2:171287/1‑203
                                                                                                                                                                          GGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAACGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCAC                                                                                                                     >  2:508616/1‑156
                                                                                                                                                                                    CTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTG                                                              <  1:1210547/201‑1
                                                                                                                                                                                                CCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGC                                                                                                  >  2:1210544/1‑153
                                                                                                                                                                                                             GCATTGCGATCGCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGGTTCTCCTTTCGCTAGTCGCACGGCCATTCCCCTGGCCGTGGGCACGTTTGCCCCTGACA  >  1:1043053/1‑236
                                                                                                                                                                                                                        GCTTCTGGCATGCCGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTG                                                                            >  2:1444144/1‑151
                                                                                                                                                                                                                                     CGCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACCACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGTGGGCACGTT             >  2:638966/1‑201
                                                                                                                                                                                                                                      GCCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCACCTCACGCGGCACGGCCGCTTTCAACTGTGT                                                                           >  2:344184/1‑138
                                                                                                                                                                                                                                       CCGATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGC                                                                                                               >  2:112635/1‑101
                                                                                                                                                                                                                                                                                                                                                                                                                                                         
AATTCCCTGACTGCCCTGCCGGCGTGCTCGCTGGCGGCCCGCGCCTGCGCGCTTGTCAGGGGCAAACGTGCCCACGGCCAGGGGAATGGCCGTGCGACTAGAGAAAGGAGAAACACGGTGAACATTACACAGTTGAAAGCGGCCCTGCCGCGTGAGTTGCTGGCGTCGGTGGTGGTCTTCCTGGTGGCCTTGCCGTTGTGCATGGGCATTGCGATCGCTTCTGGCATGCCGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/106002‑106235
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atgccgccgATAATCCCAGTAATCAGGCCTTTTGCCGGCGGCATGCCAGAAGCGATCGCAATGCCCATGCACAACGGCAAGGCCACCAGGAAGACCACCACCGACGCCAGCAACTCACGCGGCAGGGCCGCTTTCAACTGTGTAATGTTCACCGTGTTTCTCCTTTCTCTAGTCGCACGGCCATTCCCCTGGCCGTGGGCACGTTTGCCCCTGACA  <  AE015451/106261‑106055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.