New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 261582	75 (0.870)	5 (0.060)	5/342	NT	6.4%	coding (64/966 nt)	PP_0210	putative Phycobiliprotein
	?	AE015451	= 261583	75 (0.910)					coding (65/966 nt)	PP_0210	putative Phycobiliprotein

CACCTTAAGCGTCACTGCCTGGCGTTGCTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/261406‑261582 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAGACGCGGCAGTTCGCGGCCTTCCTCGTGGCGCAGCAACGCCAGGCAGTGACGCTTAAGGTGAGTGAATTCAGGGCTGGTCAGCAGGCTGGCGCGGCGTGGGCGCGCAAAG  <  AE015451/261583‑261357                                                                                                                                                                                                                                                                                                                                                                                                                      CACCTTAAGCGTCACTGCCTGGCGTTGCTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCGTCGCTGG                                                                                                                                                                                                                              >  2:1154940/1‑184             CACTGCCTGGCGTTGCTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGC                                                                                                                                                                                                                                          <  1:300013/160‑1             CACTGCCTGGCGTTGCTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGC                                                                                                                                                                                                                                          >  2:300011/1‑160                                                         GCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTC                                                                                                                                                                              <  1:1154943/176‑1                                                                                            ACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGCCATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCGTCGCTGGCATCAAGGCGCGGTAACAGGGCAAGAATGTac                                                                                                                                                                                              >  2:100621/1‑123                                                                                                        GGATCGCGCTATGACTGACCGAACGACCGACACCCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAGACGCGGCAGTTCGCGGCCTTCCTCGTGGCGCAGCAACGCCAGGC                                                                   <  1:100621/236‑1                                                                                                                                                         CTGTTACCTCGCCTTGATGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAGACGCGGCAGTTCGCGGCCTTCCTCGTGG                                                                                   >  1:386013/1‑171                                                                                                                                                                       TGATGCCAGCGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGGCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTAAGACGCGGCAGTT                                                                                                    >  2:625060/1‑140                                                                                                                                                                                CGTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAGACGCGGCAGTTCGCGGCCTTCCTCGTGGCGCAGCAACGCCAGGCAGTGACGCTTAAGGTGAGTGAATTCAGGGCTGGTCAGCAGGCTGGCGCGGCGTGGGCGCGCAAAG  <  2:1342697/229‑1                                                                                                                                                                                                                                                                                                                                                                                                                      CACCTTAAGCGTCACTGCCTGGCGTTGCTGCGCCACGAGGAAGGCCGCGAACTGCCGCGTCTGACTCCGCTGGGCCTGCCGGACACTGACCACCCACCGCTACGGATCGCGCTATGACTGACCGAACGACCGACAACCCCGACATTCTTGCCCTGTTACCTCGCCTTGATGCCAGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/261406‑261582 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccagcgTCGCTGGCATCAAGGCGAGGTAACAGGGCAAGAATGTCGGGGTTGTCGGTCGTTCGGTCAGTCATAGCGCGATCCGTAGCGGTGGGTGGTCAGTGTCCGGCAGGCCCAGCGGAGTCAGACGCGGCAGTTCGCGGCCTTCCTCGTGGCGCAGCAACGCCAGGCAGTGACGCTTAAGGTGAGTGAATTCAGGGCTGGTCAGCAGGCTGGCGCGGCGTGGGCGCGCAAAG  <  AE015451/261583‑261357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.