New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2791202	88 (1.020)	5 (0.060)	5/340	NT	5.5%	coding (346/1212 nt)	sstT	Serine/threonine transporter SstT
	?	AE015451	= 2791228	88 (1.070)					coding (320/1212 nt)	sstT	Serine/threonine transporter SstT

GACCAGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2790963‑2791202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcgcTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGCCAACTTCATCGGCGTGCTGACATGGGCCATCGGCTTGGGCGTGGCCCTGCGCCACGCCGGCGAAACGACCCGTACCGTGGTCGAAGACCTGTCCAATGGTGTAACCCTGATCGTACG  <  AE015451/2791228‑2791006                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACCAGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCC                                                                                                                                                                                                                                       <  2:1492519/234‑1     AGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCGGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGC                                                                                                                                                                                                                                 >  1:448470/1‑236     AGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGC                                                                                                                                                                                                                                 >  1:361315/1‑236     AGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGC                                                                                                                                                                                                                                 >  1:389536/1‑236     AGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCG                                                                                                                                                                                                                                  >  1:1124726/1‑235                                                                        GGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCG                                                                                                                                                                                                                                  <  2:871404/168‑1                                                                            TTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGC                                                                                                                                                                                                                                   >  2:1304939/1‑163                                                                            TTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTG                                                                                                                                                                                                                                     >  2:281345/1‑161                                                                                                                                                         TGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGC                                                                                                                       >  1:202429/1‑194                                                                                                                                                                   GTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGCCAACTTCATCGGCGTGC                                                                                                      >  1:281347/1‑201                                                                                                                                                                     TGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCCGTT                                                                                                                                                                 >  2:820906/1‑140                                                                                                                                                                         CAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTG                                                                                                                                                             >  2:1063102/1‑140                                                                                                                                                                                                     TTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCC                                                                                                                                                                                                                                       >  2:743151/1‑38                                                                                                                                                                                                                              CGGCGATGCCGCCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGCCAACTTCATCGGCGTGCTGACATG                                                                                               >  2:1118880/1‑149                                                                                                                                                                                                                                      CCGCCTGGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGCCAACTTCATCGGCGTGCTGACATGGGCCATCGGCTTGGGCGTGGCCCTGCGCCACGCCGGCGAAACGACCCGTACCGTGGTCGAAGACCTGTCCAATGGTGTAACCCTGATCGTACG  >  1:851925/1‑234                                                                                                                                                                                                                                            GGCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCCACGCCCACTTCATCGGCGTGCTGACA                                                                                                 >  2:426349/1‑133                                                                                                                                                                                                                                             GCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAA                                                                                                                                                           <  1:652987/74‑1                                                                                                                                                                                                                                             GCGCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAA                                                                                                                                                           >  2:652985/1‑74                                                                                                                                                                                                                                               GCTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGCCAACTTCATCGGCGTGCTGACATGGGCCATCGGCT                                                                                    >  2:361313/1‑143                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GACCAGGCCAAAGATGCCCAGCGGGGCGAAGCGGATGACCACGCGTACGATCAGGGTTACACCATTGGACAGGTCTTCGACCACGGTACGGGTCGTTTCGCCGGCGTGGCGCAGGGCCACGCCCAAGCCGATGGCCCATGTCAGCACGCCGATGAAGTTGGCGTTGAGCAGGGCATTGACCGGGTTGTCTACCGCGTTCAGCAACAGGTTCTGCAGCACTTCGGCGATGCCGCCTGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2790963‑2791202 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctggcgcTAAGCACCAGCGAGGCCACGCTGAGCGCGCCAGGCGGCATCGCCGAAGTGCTGCAGAACCTGTTGCTGAACGCGGTAGACAACCCGGTCAATGCCCTGCTCAACGCCAACTTCATCGGCGTGCTGACATGGGCCATCGGCTTGGGCGTGGCCCTGCGCCACGCCGGCGAAACGACCCGTACCGTGGTCGAAGACCTGTCCAATGGTGTAACCCTGATCGTACG  <  AE015451/2791228‑2791006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.