New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 3040551	56 (0.650)	3 (0.040)	3/342	NT	5.6%	coding (154/786 nt)	PP_2652	putative Hydratase/decarboxylase
	?	AE015451	= 3040582	48 (0.580)					coding (185/786 nt)	PP_2652	putative Hydratase/decarboxylase

TTGCATCATGACAATATATTTATCCTTATCAATGTCAGGCCCTAGCATCTGTTGTCCGCCATCGCCTATTTCAATGAGGTCTTGATGAACCGTTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3040314‑3040551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccgACGCCCAGCTTCCACCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCATAGCCTTGTTTCAACGTCTCGGGCTTGAGGCTGGCGGGCAGTTCTGTCAGCAGGTCACCGCTGCGCCAGTGTTGCAGTAGCAAGGCTGCAGTGCGTTGGTGTACGAAGAGCGAACGGTTCATCAAGACCTCATTGAAATAGGCGATGGCGGACAACAGATGCTAGG  <  AE015451/3040582‑3040354                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGCATCATGACAATATATTTATCCTTATCAATGTCAGGCCCTAGCATCTGTTGTCCGCCATCGCCTATTTCAATGAGGTCTTGATGAACCGTTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTG                                                                                                                                                                                                                                          <  1:1061930/235‑1    CATCATGACAATATATTTATCCTTATCAATGTCAGGCCCTAGCATCTGTTGTCCGCCATCGCCTATTTCAATGAGGTCTTGATGAACCGTTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCC                                                                                                                                                                                                                                        >  2:886215/1‑234                         CTTATCAATGTCAGGCCCTAGCATCTGTTGTCCGCCATCGCCTATTTCAATGAGGTCTTGATGAACCGTTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCCG                                                                                                                                                                                                                                       >  1:1524309/1‑214                          TTATCAATGTCAGGCCCTAGCATCTGTTGTCCGCCATCGCCTATTTCAATGAGGTCTTGATGAACCGTTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCC                                                                                                                                                                                                                                        >  2:731553/1‑212                                                                                             TTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCC                                                                                                                                                                                                                                        <  1:1360313/145‑1                                                                                             TTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCC                                                                                                                                                                                                                                        >  2:1360310/1‑145                                                                                                                                             GCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCCGACGCCCAGCTTCCACCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCAT                                                                                                                                                                       >  2:815860/1‑162                                                                                                                                                           TGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCCGACGCCCAGCTTCCACCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCATAGCCTTGTTTCAACGTCTCGGGCTTGAGGCTGGCGGGCAGTTCTGTCAGCAGGTCACCGCTGCGCCAGTGTTGCAGTAGCA                                                                                      >  1:1172624/1‑229                                                                                                                                                                            GCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCCGACGCCCAGCTTCCACCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCATAGCCTTGTTTCAACGTATCGGGCTTGAGGCTGGCGGGCAGGTCTGTCAGCAGGTCACCGCT                                                                                                          >  1:33162/1‑192                                                                                                                                                                                                                                        GCTGCCGACGCCCAGCTTCCACCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCATAGCCTTGTTTCAACGTCTCGGGCTTGAGGCTGGCGGGCAGTTCTGTCAGCAGGTCACCGCTGCGCCAGTGTTGCAGTAGCAAGGCTGCAGTGCGTTGGTGTACGAAGAGCGAACGGTTCATCAAGACCTCATTGAAATAGGCGATGGCGGACAACAGATGCTAGG  <  1:978657/236‑1                                                                                                                                                                                                                                           GCCGACGCCCAGCTTCCCCCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCATAGCCTTGTTTCAACGTCTCGGGCTTGAGGCTGGCGGGCAGTTCTGTCAGCAGGTCACCGCTGCGCCAGTGTTGCAGTAGCAAGGCTGCAGT                                                                            <  2:533275/159‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTGCATCATGACAATATATTTATCCTTATCAATGTCAGGCCCTAGCATCTGTTGTCCGCCATCGCCTATTTCAATGAGGTCTTGATGAACCGTTCGCTCTTCGTACACCAACGCACTGCAGCCTTGCTACTGCAACACTGGCGCAGCGGTGACCTGCTGACAGAACTGCCCGCCAGCCTCAAGCCCGAGACGTTGAAACAAGGCTATGACAGCCAGGACCAGTTGTTTGCCGCTGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/3040314‑3040551 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctgccgACGCCCAGCTTCCACCCGGCGCGCTGGCCTGCGGCAGCGGCAAACAACTGGTCCTGGCTGTCATAGCCTTGTTTCAACGTCTCGGGCTTGAGGCTGGCGGGCAGTTCTGTCAGCAGGTCACCGCTGCGCCAGTGTTGCAGTAGCAAGGCTGCAGTGCGTTGGTGTACGAAGAGCGAACGGTTCATCAAGACCTCATTGAAATAGGCGATGGCGGACAACAGATGCTAGG  <  AE015451/3040582‑3040354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.