| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 3498263 | 81 (0.940) | 7 (0.090) | 7/334 | NT | 8.2% | intergenic (‑667/+39) | PP_5562/PP_5563 | conserved protein of unknown function/conserved membrane protein of unknown function |
| ? | AE015451 | = 3498264 | 80 (0.990) | intergenic (‑668/+38) | PP_5562/PP_5563 | conserved protein of unknown function/conserved membrane protein of unknown function | |||||
CAAAACCTGATAGCTAGCGCGATGCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCAATATCCTTGATCATTCACCGTCGCAGCCGCCACCGCATTCGCGGGCAAGCCCGCTCCTACATCGACCGGTGGTGTCGCCACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATTCGCGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3498019‑3498263‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcagGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCCTACGAGCATCGCGCTAGCT < AE015451/3498264‑3498030 CAAAACCTGATAGCTAGCGCGATGCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCAATATCCTTGATCATTCACCGTCGCAGCCGCCACCGCATTCGCGGGCAAGCCCGCTCCTACATCGACCGGTGGTGTCGCCACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATT > 1:1463866/1‑236 AACCTGATAGCGAGCGCGATGCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGACCTGCCGGCAAATATCCTTGATCATTCACCGTCGCAGCCGCCACCGCATTCGCGGGCAAGCCCGCTCCTACATCGACCGGTGGTGTCGCCACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATTCGC < 1:23818/236‑1 CTGATAGCTAGCGCGATGCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCAATATCCTTGATCATTCACCGTCGCAGCCGCCACCGCATTCGCGGGCAAGCCCGCTCCTACATCGACCGGTGGTGTCGCCACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATTCGCGG > 1:1450180/1‑235 TCATTCACCGTCGCAGCCGCCACCGCATTCGCGGGCAAGCCCGCTCCTACATCGACCGGTGGTGTCGCCACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCAT > 2:1317030/1‑155 ACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCAACGTCACAGCCTCCACCGGATGCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGA < 2:1071126/135‑1 ACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGCCACCACCGGCCGCTGTAGGAGCGGGCTTGCCCGCGA > 1:1272504/1‑215 CTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAG > 2:696414/1‑178 ACCGTCACAGCCGCCACCGCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCG > 1:444645/1‑214 CGTCACAGCCGCCACCGCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGC > 2:1460387/1‑181 AGCCGCCACCGCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGAT > 1:1047894/1‑198 ACCGCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCT > 2:1105572/1‑231 GCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCCTACGAt > 2:1042080/1‑235 GCATTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCCTACGAG > 1:593923/1‑236 TTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAACCCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTG < 1:707377/164‑1 TTCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGC < 1:236471/191‑1 TCGCGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCC > 1:598982/1‑226 CGGGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCCTACGAGCATCGC < 1:1192660/235‑1 CGGGCAGGCTGCCCGCGAAGGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTG < 1:449028/160‑1 GGCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTTCCCGCGAATGCGGTGGCGGCTGCGACGGTGAA > 1:1062046/1‑168 GCAGGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCG < 1:141740/206‑1 GGCTGCCCGGGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCCTACGAGCATCGCGCTAGCT < 1:437005/236‑1 GGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGGGCATGATCAAGGATATTGGCCGGCA > 2:1473684/1‑186 CAAAACCTGATAGCTAGCGCGATGCTCGTAGGAGCGGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCAATATCCTTGATCATTCACCGTCGCAGCCGCCACCGCATTCGCGGGCAAGCCCGCTCCTACATCGACCGGTGGTGTCGCCACGTTGTAGGAGCTGGTTTACCCGCGAATAGGCCGGACCTGCCGGCCACTATCCCTGGTCATTCACCGTCACAGCCGCCACCGCATTCGCGGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/3498019‑3498263‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ttcgcgggcagGCTGCCCGCGAATGCGGTGGCGGCTGTGACGGTGAATGACCAGGGATAGTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCAGCTCCTACAACGTGGCGACACCACCGGTCGATGTAGGAGCGGGCTTGCCCGCGAATGCGGTGGCGGCTGCGACGGTGAATGATCAAGGATATTGGCCGGCAGGTCCGGCCTATTCGCGGGTAAACCCGCTCCTACGAGCATCGCGCTAGCT < AE015451/3498264‑3498030 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |