| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5292805 = | 103 (1.200) | 7 (0.090) | 7/324 | NT | 7.3% | coding (45/888 nt) | mmsB | 3‑hydroxyisobutyrate dehydrogenase |
| ? | AE015451 | 5292821 = | 85 (1.090) | coding (29/888 nt) | mmsB | 3‑hydroxyisobutyrate dehydrogenase | |||||
CCCGATCCCGGTACCCGTACCGTTCTTCAGCTTCACCGGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5293043‑5292805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgggcgcgcccatgTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACCGGGATCGGGATGTTGATGC > AE015451/5292821‑5293053 cccgcgCCCGGTACCCGTACCGTTCTTCAGCTTCACCGGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCC < 1:287253/229‑1CCCGATCCCGGTACCCGTACCGTTCTTCAGCTTCACCGGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCC < 1:1456171/235‑1 GATCCCGGTACCCGTACCGTTCTTCAGCTTCACCGGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTCCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATG < 1:1477263/236‑1 TCCCGGTACCCGTACCGTTCTTCAGCTTCACCGGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCC < 1:1206558/230‑1 GGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGTTGCCCAGGC > 1:838706/1‑212 TGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGTCGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCC < 2:1025941/175‑1 CCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGT < 1:808323/229‑1 GGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGTT < 1:448042/165‑1 GGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGG > 2:198285/1‑152 CCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGC > 2:381576/1‑123 ATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAG > 2:838704/1‑171 CTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGGGCAGTGACGGTCTTGGTCTGAGTGT > 1:477537/1‑189 GTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTGACCGAGTTTGGAACCCC > 1:1037721/1‑220 CGCATCCATATGCCTGGGCAACATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATG < 2:660356/67‑1 GGGCAACATGGGCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACC > 1:1476648/1‑236 GCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACCGGGATCGGGA > 1:1125444/1‑235 GCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTC > 2:853162/1‑129 GCGCGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTC < 1:853164/129‑1 CGCCCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACCGGGATCGGGATGT > 1:73070/1‑235 CCATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCC > 1:198286/1‑152 CATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACCGGGATCGGGATGTTGATG < 1:1356445/236‑1 ATGTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACCGGGATCGGGATGTTGATGC > 1:869736/1‑236 CCCGATCCCGGTACCCGTACCGTTCTTCAGCTTCACCGGCTCGCGGGGTTCCAAACTCGGTGACCTGGGGCCGTACGGCAAGCAAGTGGTGCAGTTCTACACTCAGACCAAGACCGTCACTGCTCGCTGGTTCGATGACGACAGCGTCAACGACGGTGTGAACACCACCATTAGCCTGCGCTAAGGAGTACGTCATGCGTATCGCATTCATCGGCCTGGGCAACATGGGCGCGCCCATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5293043‑5292805‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catgggcgcgcccatgTTGCCCAGGCCGATGAATGCGATACGCATGACGTACTCCTTAGCGCAGGCTAATGGTGGTGTTCACACCGTCGTTGACGCTGTCGTCATCGAACCAGCGAGCAGTGACGGTCTTGGTCTGAGTGTAGAACTGCACCACTTGCTTGCCGTACGGCCCCAGGTCACCGAGTTTGGAACCCCGCGAGCCGGTGAAGCTGAAGAACGGTACGGGTACCGGGATCGGGATGTTGATGC > AE015451/5292821‑5293053 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |