| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 5554400 = | 136 (1.580) | 4 (0.050) | 4/334 | NT | 3.1% | coding (496/546 nt) | PP_4886 | conserved protein of unknown function |
| ? | AE015451 | 5554498 = | 121 (1.500) | coding (398/546 nt) | PP_4886 | conserved protein of unknown function | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5554639‑5554400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgctggcgCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCAGAGGTG > AE015451/5554498‑5554728 CCAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCCGTGGAAGTCGTGCAGCTGAACTACTGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCA > 1:87270/1‑231CCAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCT > 1:1177797/1‑236CCAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCT > 1:177337/1‑236 CAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTG > 1:574668/1‑236 CAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGC < 2:639984/234‑1 CAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCAAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTG > 1:798019/1‑236 CTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCCCTGGGGTGCCAGGGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGC > 1:499046/1‑214 CTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGCTTTGGGCGTAATCGGCAAT < 2:950557/198‑1 TCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGac > 2:401440/1‑135 AACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGC < 2:499044/125‑1 AATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGTCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTA < 2:229411/91‑1 TCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCT < 2:1134964/97‑1 CAGCGCTGGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCA < 1:1464291/236‑1 AGCGCTGGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCA > 1:992150/1‑235 AGCGCTGGCGCGTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACGTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGT < 2:424138/164‑1 CGCTGGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCAGAG > 1:1237052/1‑236 CTGGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACAC < 2:1109411/84‑1 GGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCAGAGGTG > 1:1162622/1‑235 GGCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCAGAGGTG > 1:1155002/1‑235 GCGCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGG > 2:754417/1‑214 GCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGG < 1:68512/143‑1 CCAGCTGCAAGCTGCTGGAGGCGAGCTGTGCCGGGCAGCACCTGAAGGAAGTGAAGCTCGTGCTGTGTCGTGCGGGTGGCGACAAGCTCAAGTACTACGAAGTCGTCCTGGAAGAAGTGATCATTGCCGATTACGCCCAAAGCGCCAGCGCTGGGGTGCCAGTGGAAGTCGTGCAGCTGAACTACGGGCGCATCAAGACAATCTACACGCGGCAGAAACGCCTCGACGGCAGCGCTGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/5554639‑5554400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cagcgctggcgCTTTGGGCGTAATCGGCAATGATCACTTCTTCCAGGACGACTTCGTAGTACTTGAGCTTGTCGCCACCCGCACGACACAGCACGAGCTTCACTTCCTTCAGGTGCTGCCCGGCACAGCTCGCCTCCAGCAGCTTGCAGCTGGCACTGTCCAGGTACTTAGTGAAGGTGAAGTTGGTGAGTGTGGTGCGGCCTGATGATGCGCCGCCCGCGGAGCTTGCGGTGGCAGAGGTG > AE015451/5554498‑5554728 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |