New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 579088384 (0.980)3 (0.040) 3/340 NT 3.6% coding (835/1065 nt) hemE Uroporphyrinogen decarboxylase
?AE015451 = 5790885 79 (0.960)coding (833/1065 nt) hemE Uroporphyrinogen decarboxylase
Rejected: Frequency below/above cutoff threshold.

TGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAGTGCCGTGGCCATAGCTGGCCAGGATGCGCGCCACTTCCTTGCGAATGGCCTCGGGCTTGGCATACAGCACGGTCGGGTCCATGTTGCCTTGCAGCGCCACCTTGTCACCCACGCGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5790644‑5790883
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgacgCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCAGTGAC  <  AE015451/5790885‑5790652
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
TGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAGTGCCGTGGCCATAGCTGGCCAGGATGCGCGCCACTTCCTTGCGAATGGCCTCGGGCTTGGCATACAGCACGGTCGGGTCCATGTTGCCTTGCAGCGCCACCCTGTCACCCACGCGGC                                                                                                                                                                                                                                                >  1:462069/1‑236
  CATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAGTGCCGTGGCCATAGCTGGCCAGGATGCGCGCCACTTCCTTGCGAATGGCCTCGGGCTTGGCATACAGCACGGTCGGGTCCATGTTGCCTTGCAGCGCCACCTTGTCACCCACGCGGCG                                                                                                                                                                                                                                               >  1:888845/1‑235
                                                                                                                                                                                               TCGGGTCCATGTTGCCTTGCAGCGCCACCTTGTCACCCACGCGGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGG                                                                                                                         <  1:439784/164‑1
                                                                                                                                                                                               TCGGGTCCATGTTGCCTTGCAGCGCCACCTTGTCACCCACGCGGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCAT                                                                                                                                                             >  2:841636/1‑128
                                                                                                                                                                                                            GCCTTGCAGCGCCACCTTGTCACCCACGCGGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGCCCGTGCTGTATGCCAAGCCCGAGGC                                                                                                                                                                >  2:439782/1‑112
                                                                                                                                                                                                                                        CGGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAG                                                                                                                                                                  <  1:1075479/82‑1
                                                                                                                                                                                                                                        CGGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAG                                                                                                                                                                  >  2:1075476/1‑82
                                                                                                                                                                                                                                         GGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCA       <  1:1155769/236‑1
                                                                                                                                                                                                                                         GGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCA       <  1:300122/236‑1
                                                                                                                                                                                                                                         GGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGT                       <  2:922728/220‑1
                                                                                                                                                                                                                                         GGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGG                                                                                           <  2:1337865/152‑1
                                                                                                                                                                                                                                         GGCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGG                                                                                           >  1:1337868/1‑152
                                                                                                                                                                                                                                         GGCGACGCCCGTCGCCGCGTGGGTGACAAGGTCGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCA                               <  1:418019/212‑1
                                                                                                                                                                                                                                          GCGACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGG                                                                                                             <  2:1228648/133‑1
                                                                                                                                                                                                                                             ACGCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAG               <  2:632222/224‑1
                                                                                                                                                                                                                                               GCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCAGTGAC  <  1:767941/235‑1
                                                                                                                                                                                                                                               GCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCAGTGAC  <  1:577022/235‑1
                                                                                                                                                                                                                                               GCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCAGTGAC  <  1:1305647/235‑1
                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          
TGCATCAAGTCACTGGTGGTACTGCGCCGACAGTTCGTGCACGGCGTTGATGAATGCACCCGCATGTTCCGGGTCAACTTCCGGCGTGATGCCGTGGCCAAGGTTGAACACATGGCCAGTGCCGTGGCCATAGCTGGCCAGGATGCGCGCCACTTCCTTGCGAATGGCCTCGGGCTTGGCATACAGCACGGTCGGGTCCATGTTGCCTTGCAGCGCCACCTTGTCACCCACGCGGCGACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/5790644‑5790883
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgacgCCCGTCGCCGCGTGGGTGACAAGGTGGCGCTGCAAGGCAACATGGACCCGACCGTGCTGTATGCCAAGCCCGAGGCCATTCGCAAGGAAGTGGCGCGCATCCTGGCCAGCTATGGCCACGGCACTGGCCATGTGTTCAACCTTGGCCACGGCATCACGCCGGAAGTTGACCCGGAACATGCGGGTGCATTCATCAACGCCGTGCACGAACTGTCGGCGCAGTACCACCAGTGAC  <  AE015451/5790885‑5790652

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.