New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	707029 =	71 (0.830)	5 (0.070)	5/304	NT	7.7%	intergenic (+205/+41)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20
	?	AE015451	707055 =	60 (0.820)					intergenic (+231/+15)	PP_0599/rpsT	paraquat‑inducible protein B/30S ribosomal protein S20

GAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTGCGTCGATGGCTTTAACTA  >  AE015451/706803‑707245                                                                                                                                                                                                                                   |                                                                                                                                                                                                                         gAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGAc                                                                                                                                                                                                                 >  1:227200/1‑236 (MQ=255)      gttccatggtccgcacctacatcaagaatgtagttaaagccatcgacgcaaaagacgccgaaaaagcgcaagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAg                                                                                                                                                                                                            >  2:1044406‑M1/222‑236 (MQ=255)       tCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAg                                                                                                                                                                                                            <  1:785033/235‑1 (MQ=255)           aTCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCg                                                                                                                                                                                                                   <  1:219562/224‑1 (MQ=255)                       tacatcaagaatgtagttaaagccatcgacgcaaaagacgccgaaaaagcgcaagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAACCCGACCCTATGGCCgg                                                                                                                                                                                                      <  1:1217799‑M1/21‑1 (MQ=255)                            caagaatgtagttaaagccatcgacgcaaaagacgccgaaaaagcgcaagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacctcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcga                                                                                                                                                                                                                          <  2:227199‑M1/1‑1 (MQ=255)                                 gggCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGTCTAGCGCGt                                                                                                                                                                                     >  2:1442911/1‑232 (MQ=255)                                 atgtagttaaagccatcgacgcaaaagacgccgaaaaagcgcaagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgcaagaagctgcagctgcctaagcgacgcgctagtcgac                                                                                                                                                                                                                         <  2:342907‑M1/2‑2 (MQ=255)                                    ccgccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGCGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAACAACGACCCTAGCGTCggct                                                                                                                                                                                                    >  1:21618/1‑212 (MQ=255)                                    ccgccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAg                                                                                                                                                                                          >  2:1401336/1‑224 (MQ=255)                                    ccgccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAg                                                                                                                                                                              >  1:413530/1‑236 (MQ=255)                                      gccAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACCAAAAACCGCCCCTAGGGTCGGtt                                                                                                                                                                                                    >  2:1059570/1‑212 (MQ=255)                                         aaagccatcgacgcaaaagacgccgaaaaagcgcaagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAggg                                                                                                                                                                                                          >  1:242050‑M1/187‑203 (MQ=255)                                             gcgGCCCGGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCACAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACaaaa                                                                                                                                                                                                                        <  1:1261813/185‑1 (MQ=255)                                                 cccTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTa                                                                                                                                                                               <  2:1229037/222‑1 (MQ=255)                                                         ttttGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGcttctt                                                                                                                                                              <  2:916667/231‑1 (MQ=255)                                                            ggtgGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGcttctt                                                                                                                                                              <  1:123066/227‑1 (MQ=255)                                                                 gaaaaagcgcaagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCg                                                                                                                                                                                                       <  1:706146‑M1/20‑1 (MQ=255)                                                                  aGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAgc                                                                                                                                                         <  1:986534/227‑1 (MQ=255)                                                                    cGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTc                                                                                                                                                                                                <  2:916345/186‑1 (MQ=255)                                                                       ccTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGTGCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCCCCtc                                                                                                                                                    >  1:216541/1‑226 (MQ=255)                                                                           gCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACcaaa                                                                                                                                                                                                                        >  2:50453/1‑155 (MQ=255)                                                                           aagccgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCGGt                                                                                                                                                                                                     <  2:108781‑M1/22‑1 (MQ=255)                                                                              tCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAggg                                                                                                                                                                                                          <  2:616208/166‑1 (MQ=255)                                                                              tCGCGAAAGGGGCACGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGa                                                                                                                                    >  1:787066/1‑236 (MQ=255)                                                                               cgcttacgttctggctgtacctgtaatcgaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaacggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAg                                                                                                                                                                                                            >  2:1178369‑M1/149‑163 (MQ=255)                                                                                gcgAAAGGGGCGCGTAGCGGCCCCTCGGTCGCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGcttctt                                                                                                                                                              <  1:81618/208‑1 (MQ=255)                                                                                    aaGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATACATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGAtg                                                                                                                                                >  1:769748/1‑218 (MQ=255)                                                                                    aaGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCgg                                                                                                                                                                                                      <  2:1072523/164‑1 (MQ=255)                                                                                    aaGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCgg                                                                                                                                                                                                      >  1:1072526/1‑164 (MQ=255)                                                                                    aaGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACgg                                                                                                                                 >  2:948314/1‑233 (MQ=255)                                                                                           gcgTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAgcg                                                                                                                                                        >  1:500349/1‑203 (MQ=255)                                                                                           gcgTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGAc                                                                                                                       <  1:948316/236‑1 (MQ=255)                                                                                            cgTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGAc                                                                                                                       <  1:635562/235‑1 (MQ=255)                                                                                             gTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCa                                                                                                                                      <  2:836076/219‑1 (MQ=255)                                                                                                 cGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGagca                                                                                                                  >  1:1334976/1‑235 (MQ=255)                                                                                                         cGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACgga                                                                                                                                >  1:76342/1‑212 (MQ=255)                                                                                                          ggTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTc                                                                                                         <  1:1035864/235‑1 (MQ=255)                                                                                                           gaccgtatggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgccagtcgAAAAACCGACCCTAGGGTCgg                                                                                                                                                                                                      <  2:1387122‑M1/21‑1 (MQ=255)                                                                                                                 atggccgacaagggtatcatccacaagaacaaggctgctcgtaacaaaggccgtctgaatggccacatcaaggagctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGcttctt                                                                                                                                                              >  2:874819‑M1/115‑175 (MQ=255)                                                                                                                  cgcAGAAAGTGAGATTGCCGGGGCTGCCCCGCAACCCTATCGCGACACAAGGCCGCTACCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCg                                                                                                                                                                                                                   <  1:116423/121‑1 (MQ=255)                                                                                                                   ggccgacaagggtatcatccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcataagcgacgcgctagtcgAAAAACCGAccc                                                                                                                                                                                                               <  2:1218045‑M1/12‑1 (MQ=255)                                                                                                                        aaGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATAcc                                                                                           <  1:754611/235‑1 (MQ=255)                                                                                                                         aGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGTGTCGGTTTTTCGa                                                                                                                                                                                              >  2:395455/1‑135 (MQ=255)                                                                                                                         aGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAgcg                                                                                                                                                        >  1:1522576/1‑173 (MQ=255)                                                                                                                         aGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGAtg                                                                                                                                                >  2:1508302/1‑181 (MQ=255)                                                                                                                               aTTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGcc                                                                                                                                           <  2:317219/180‑1 (MQ=255)                                                                                                                               aTTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCgg                                                                                   <  1:239278/236‑1 (MQ=255)                                                                                                                               aTTGCCGGGGCTGCCCCGCAGCCCTAGCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTgg                                                                                                   <  1:376439/220‑1 (MQ=255)                                                                                                                                   ccGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAAGCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAgc                                                                                                                                                         <  1:1245337/162‑1 (MQ=255)                                                                                                                                   atccacaagaacaaggctgctcgtcacaaaggccgtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGAc                                                                                                                       >  1:251711‑M1/97‑196 (MQ=255)                                                                                                                                    cGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCa                                                                                >  2:1481471/1‑234 (MQ=255)                                                                                                                                     ggggCGGCCCCGCAGCCCTATCGCGACGCAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATAc                                                                             <  1:198463/236‑1 (MQ=255)                                                                                                                                      gggCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTtg                                                                                                                           >  1:1236080/1‑189 (MQ=255)                                                                                                                                              ccGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCtt                                                                                        <  2:789528/216‑1 (MQ=255)                                                                                                                                              acGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGAc                                                                                                                       <  2:745781/184‑1 (MQ=255)                                                                                                                                                    cccTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAACCCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTgg                                                                                                                                             <  2:1162213/157‑1 (MQ=255)                                                                                                                                                         tCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAAACGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCCCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTtgtg                                                                                                                         >  2:1257832/1‑172 (MQ=255)                                                                                                                                                         gcgcgACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGACCTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTa                                                                                                                                                                               <  2:756156/117‑1 (MQ=255)                                                                                                                                                         ccgcgACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCtt                                                                                        <  1:76058/204‑1 (MQ=255)                                                                                                                                                          cgcgACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTc                                                                                                         <  1:210057/187‑1 (MQ=255)                                                                                                                                                           gcgACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCCTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGccc                                                                                                              >  2:275821/1‑180 (MQ=255)                                                                                                                                                            cgACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTc                                                                                                         <  2:20236/185‑1 (MQ=255)                                                                                                                                                              acacAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCa                                                                                                                                      <  2:756620/154‑1 (MQ=255)                                                                                                                                                                     gtctgaatggccacatcaaggcgctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGAt                                                                                                                                                 >  2:1096576‑M1/63‑136 (MQ=255)                                                                                                                                                                       cGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCgg                                            >  1:689412/1‑235 (MQ=255)                                                                                                                                                                          tCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCtt                                         >  1:880100/1‑235 (MQ=255)                                                                                                                                                                            ccACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTtg                                                                                                      >  1:513499/1‑172 (MQ=255)                                                                                                                                                                            ccACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACa                                                                  >  1:264037/1‑208 (MQ=255)                                                                                                                                                                               caGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAACAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATAcc                                                                                           <  2:500095/180‑1 (MQ=255)                                                                                                                                                                               caGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTAc                                                             <  1:1280243/210‑1 (MQ=255)                                                                                                                                                                                aGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGcc                                                                                 <  2:505279/189‑1 (MQ=255)                                                                                                                                                                                  aTCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGcc                                                                                 <  1:657758/187‑1 (MQ=255)                                                                                                                                                                                    cGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCtttt                                 >  2:855595/1‑233 (MQ=255)                                                                                                                                                                                         cccGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTc                         >  1:293839/1‑236 (MQ=255)                                                                                                                                                                                          ccGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGa                                                                       >  1:1150304/1‑189 (MQ=255)                                                                                                                                                                                          ccGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGa                                                                       <  2:1150301/189‑1 (MQ=255)                                                                                                                                                                                           gctgaaagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAgg                                                                <  1:88637‑M1/155‑1 (MQ=255)                                                                                                                                                                                           cGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCtt                       >  1:1143711/1‑236 (MQ=255)                                                                                                                                                                                               tGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTg                    >  1:1156588/1‑235 (MQ=255)                                                                                                                                                                                                ggAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGAGGATACCCTTGTCGGCCATACgg                                                                           >  1:341513/1‑179 (MQ=255)                                                                                                                                                                                                aagaagctgcagctgcctaagcgacgcgctagtcgAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGa                                                                                                                                    <  1:257268‑M1/87‑1 (MQ=255)                                                                                                                                                                                                     tGGGCCCGCCAGCATAAACCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTCCGACTAGCGTGTCGCTTAGGCAGCTGCAGcttctt                                                                                                                                                              <  2:1138887/91‑1 (MQ=39)                                                                                                                                                                                                          ccGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGt                          >  2:1234933/1‑218 (MQ=255)                                                                                                                                                                                                           cGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCt                                                                                         <  2:1105612/154‑1 (MQ=255)                                                                                                                                                                                                             cAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTGCGTCGATGGCTTTaa     <  1:545476/236‑1 (MQ=255)                                                                                                                                                                                                                gCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTGCg                  <  2:880098/220‑1 (MQ=255)                                                                                                                                                                                                                         gCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTGCGTCGATGGATTTAACTa  >  2:1401716/1‑227 (MQ=255)                                                                                                                                                                                                                              caacaaAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGc                                                          >  2:700407/1‑166 (MQ=255)                                                                                                                                                                                                                              caacaaAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGc                                                          <  1:700409/166‑1 (MQ=255)                                                                                                                                                                                                                               aacaaAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTg                    >  1:777988/1‑203 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                         GAAGATTCAGATCGCCAAGTGATGTAAAAGTAGGGCCGCCAAGCGCGGCCCTGCTTTTTTGTGGGAGCGGCCTTGCGTCGCGAAAGGGGCGCGTAGCGGCCCCTCGGTCTCAGCGCAGAAAGTGAGATTGCCGGGGCTGCCCCGCAGCCCTATCGCGACACAAGGCCGCTCCCACAGATCGAGTCCCGCATGGAACTGGGCCCGCAAGCATAAATCGCAGGCAACAAAAAACCGACCCTAGGGTCGGTTTTTCGACTAGCGCGTCGCTTAGGCAGCTGCAGCTTCTTTCAGCGCCTTGATGTGGCCATTCAGACGGCCTTTGTGACGAGCAGCCTTGTTCTTGTGGATGATACCCTTGTCGGCCATACGGTCGATTACAGGTACAGCCAGAACGTAAGCGGCTTGCGCTTTTTCGGCGTCTTTTGCGTCGATGGCTTTAACTA  >  AE015451/706803‑707245

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.