New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	841064 =	58 (0.670)	3 (0.040)	3/344	NT	5.2%	coding (260/618 nt)	lolB	Outer‑membrane lipoprotein LolB
	?	AE015451	841079 =	53 (0.640)					coding (245/618 nt)	lolB	Outer‑membrane lipoprotein LolB

CCAGCCATCCTGGTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGCGATCAAG  >  AE015451/840835‑841294                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                       gcatcacctttaccttgatcgccctgctggccggctgcgccggcttcggtagccgtgaggccctgcagggccacggcgacccgcaacagtggcgcgcccacaaagcgcagctgagcagcctcgatggctggcagatcaacggcaaggtcggcatccgcgccccgcgcgattccggcagcggtacgctgttctggctgcaacgccaggattattacgacattcgcctggccggcc                                                                                                                                                                                                                                    <  2:1418343‑M1/5‑1 (MQ=255)   agccaTCCTGGTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGc                                                                                                                                                                                                                                >  1:154389/1‑236 (MQ=255)   agccaTCCTGGTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAAGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGc                                                                                                                                                                                                                                >  1:669373/1‑236 (MQ=255)    gccaTCCTGGTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGc                                                                                                                                                                                                                                <  1:1251013/235‑1 (MQ=255)        tCCTGGTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGggc                                                                                                                                                                                                                            >  1:811411/1‑235 (MQ=255)             gTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCa                                                                                                                                                                                                                      >  1:1069611/1‑236 (MQ=255)               ttgatcgccctgctggccggctgcgccggcttcggtagccgtgaggccctgcagggccacggcgacccgcaacagtggcgcgcccacaaagcgcagctgagcagcctcgatggctggcagatcaacggcaaggtcggcatccgcgccccgcgcgcttccggcagcggtacgctgttctggctgcaacgccaggattattacgacattcgcctggccggcc                                                                                                                                                                                                                                    <  2:1339562‑M1/5‑1 (MQ=255)                      ggCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACGAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATg                                                                                                                                                                                                              >  2:777911/1‑235 (MQ=255)                      ggCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCg                                                                                                                                                                                                                  >  1:1140449/1‑231 (MQ=255)                                                                     ggccacggcgacccgcaacagtggcgcgcccacaaagcgcagctgagcagcctcgatggctggcagatcaacggcaaggtcggcatccgcgccccgcgcgattccggcagcggtacgctgttctggctgcaacgccaggattattacgacattcgcctggcc                                                                                                                                                                                                                                        >  2:1110583‑M1/162‑162 (MQ=255)                                                                         gggcAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGGAATAATCCTGGCGTTGCAGCCAgca                                                                                                                                                                                 >  1:315526/1‑211 (MQ=255)                                                                              ggCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGCAAGGAGCGCGGCGCCACGGCCCAGCGggc                                                                                                                                                                                                                            >  2:209158/1‑165 (MQ=255)                                                                                          accagaccagATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCg                                                                                                                                         <  1:667254/236‑1 (MQ=255)                                                                                            cagaccagaTGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGc                                                                                                                                                                      <  1:193409/205‑1 (MQ=255)                                                                                                 cagaTGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATcgc                                                                                                                                                          <  1:1256570/212‑1 (MQ=255)                                                                                                  ccacaaagcgcagctgagcagcctcgatggctggcagatcaacggcaaggtcggcatccgcgccccgcgcgattccggcagcggtacgctgttctgcctgcaacgccaggattattacgacattcgcctggccggcc                                                                                                                                                                                                                                    <  1:653800‑M1/5‑1 (MQ=255)                                                                                                     tGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGcgcg                                                                                                                                                >  1:250123/1‑218 (MQ=255)                                                                                                     tGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGGCCTTGCCGt                                                                                                                               >  1:472119/1‑235 (MQ=255)                                                                                                     tGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCg                                                                                                                                >  1:1251514/1‑234 (MQ=255)                                                                                                       cGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGa                                                                                                                            >  1:831924/1‑236 (MQ=255)                                                                                                       cGAAACCGGCAGCTGCCAGCCCAGTTGTGCGTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAg                                                                                                                                                                                                                     <  2:177468/147‑1 (MQ=255)                                                                                                         aaaCCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAg                                                                                                                                                                                       <  1:384083/175‑1 (MQ=255)                                                                                                            ccGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCCGCCAGAACAGCGTACCGCTGCCGGAATcgc                                                                                                                                                          >  1:884058/1‑201 (MQ=255)                                                                                                                                 gttCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTAc                                                                                                                                                                         >  2:1099947/1‑165 (MQ=255)                                                                                                                                   tcttcCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGt                                                                                                                                                                           <  2:150714/161‑1 (MQ=255)                                                                                                                                   tcttcCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCt                                                                                                 >  1:1418346/1‑235 (MQ=255)                                                                                                                                       ccAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGa                                                                                                                                        >  2:716772/1‑192 (MQ=255)                                                                                                                                       ccAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCt                                                                                            >  1:841526/1‑236 (MQ=255)                                                                                                                                           cagGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCttt                                                                                          <  1:677854/234‑1 (MQ=255)                                                                                                                                           cagGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTtgt                                                                                        <  1:891745/236‑1 (MQ=255)                                                                                                                                            agGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGtt                                                                                                                              <  2:1262087/197‑1 (MQ=255)                                                                                                                                              ggCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTgg                                                                                      <  1:1307573/235‑1 (MQ=255)                                                                                                                                                 ttCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGgc                                                                                    >  2:1419209/1‑234 (MQ=255)                                                                                                                                                  tCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGgcgc                                                                                  <  1:516276/235‑1 (MQ=255)                                                                                                                                                            tggCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGc                                                                       <  1:854999/236‑1 (MQ=255)                                                                                                                                                               cTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCggg                                                                    <  1:1277240/236‑1 (MQ=255)                                                                                                                                                                    tAGCGGCCCTGGTTGGCCGCTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATc                                                                                                                                                                                                   <  2:143974/104‑1 (MQ=255)                                                                                                                                                                            cTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCCCCCCGGCCCAGCGCGCCGGCCAGGCGCATGTCGta                                                                                                                                                                                                         >  2:11049/1‑90 (MQ=255)                                                                                                                                                                             tGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGAGCGCCACTGtt                                                                         >  2:1367960/1‑217 (MQ=255)                                                                                                                                                                               gTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTg                                                      <  2:831922/234‑1 (MQ=255)                                                                                                                                                                                       acgctgttctggctgcaacgccaggattattacgacattcgcctggcCGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAgg                                                                                                           <  2:1442434‑M1/126‑1 (MQ=255)                                                                                                                                                                                       acgctgttctggctgcaacgccaggattattacgacattcgcctggcCGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAgg                                                                                                           >  1:1442437‑M1/48‑173 (MQ=255)                                                                                                                                                                                            aacaccacGCCACCCGGGCAGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGGTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCt                                       >  1:789393/3‑236 (MQ=255)                                                                                                                                                                                            aGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGt                                                                   >  1:1053102/1‑208 (MQ=255)                                                                                                                                                                                              aaccacGCCACCCGGGCGGCCGGTAAGGCGCGGGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTgcg                                                                                              <  2:1162570/178‑1 (MQ=255)                                                                                                                                                                                                 caggCCACCCGGGCGGCCGGTAGGGCGCGCGGCGCCACGGCCCAGCGGGCTGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTCCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGa                                  >  2:1404551/4‑236 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCCGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACCGCGTACCGCTGCCGGAATc                                                                                                                                                            >  2:817781/1‑110 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAAt                                                                                                                                                                                                               >  2:97949/1‑59 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGc                                        >  1:1252337/1‑226 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGCAGcc                              >  1:399589/1‑236 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGcc                              >  1:637162/1‑236 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGcc                              >  1:960641/1‑236 (MQ=255)                                                                                                                                                                                                     ccACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGc                               >  1:1162359/1‑235 (MQ=255)                                                                                                                                                                                                      cACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAg                                                                                                   <  2:1140446/166‑1 (MQ=255)                                                                                                                                                                                                       aCCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCgg                            <  1:94883/236‑1 (MQ=255)                                                                                                                                                                                                           gggCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGc                                                                       >  2:1085559/1‑189 (MQ=255)                                                                                                                                                                                                           gggCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCt                                              <  2:987614/214‑1 (MQ=255)                                                                                                                                                                                                            ggcggcCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCa                        <  1:1100964/235‑1 (MQ=255)                                                                                                                                                                                                               gattattacgacattcgcctggcCGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGgcgc                                                                                                                                                 <  2:1379102‑M1/88‑1 (MQ=255)                                                                                                                                                                                                                 ccGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCg                                                                                                                                         >  2:290003/1‑117 (MQ=255)                                                                                                                                                                                                                  cGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGc                  <  1:121518/235‑1 (MQ=255)                                                                                                                                                                                                                          cgcgcgGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGc         <  1:194784/236‑1 (MQ=255)                                                                                                                                                                                                                          cgcgcgGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGc         <  1:636252/236‑1 (MQ=255)                                                                                                                                                                                                                          cgcgcgGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGc         <  1:777913/236‑1 (MQ=255)                                                                                                                                                                                                                            cgcgGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGCg        <  1:1367469/235‑1 (MQ=255)                                                                                                                                                                                                                                 cgcCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGa                                                                                                                                        <  1:312044/102‑1 (MQ=255)                                                                                                                                                                                                                                  gcCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGCGATCAAg  >  1:782025/1‑235 (MQ=255)                                                                                                                                                                                                                                      CGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCcagc              >  2:669371‑M1/1‑219 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                                       CCAGCCATCCTGGTCGAGGCTGGCCAGGCGGCTGTCGCCATCGAGGGTCAGCTTGCTCTTGCTGTCGGGGGCGGGCAGGCCGCGCACCCACCAGACCAGATGCGAAACCGGCAGCTGCCAGCCCAGTTGTTCTTCCAGCAGGGCTTCCGGGCTGGTGGCTTCGTAGCGGCCCTGGTTGGCCACTTCCAGCACCACGCCACCCGGGCGGCCGGTAAGGCGCGCGGCGCCACGGCCCAGCGGGCCGGCCAGGCGAATGTCGTAATAATCCTGGCGTTGCAGCCAGAACAGCGTACCGCTGCCGGAATCGCGCGGGGCGCGGATGCCGACCTTGCCGTTGATCTGCCAGCCATCGAGGCTGCTCAGCTGCGCTTTGTGGGCGCGCCACTGTTGCGGGTCGCCGTGGCCCTGCAGGGCCTCACGGCTACCGAAGCCGGCGCAGCCGGCCAGCAGGGCGATCAAG  >  AE015451/840835‑841294

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.