New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2135599	61 (0.710)	4 (0.050)	4/328	NT	6.9%	coding (1152/2448 nt)	fadE	medium‑long chain acyl‑CoA dehydrogenase
	?	AE015451	= 2135585	52 (0.660)					coding (1166/2448 nt)	fadE	medium‑long chain acyl‑CoA dehydrogenase

CGCGGCCACGCTCGGTCAGGTGGTACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTGGGGATCAGGGCCAGGCTGATG  >  AE015451/2135361‑2135815                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                       cgcgGCCACGCTCGGTCAGGTGGTACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCG                                                                                                                                                                                                                                >  2:845729‑M1/1‑233 (MQ=255)  gcgGCCACGCTCGGTCAGGTGGTACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGC                                                                                                                                                                                                                            >  1:666147‑M1/1‑236 (MQ=255)      ccACGCTCGGTCAGGTGGTACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGAc                                                                                                                                                                                                                        >  1:617676/1‑236 (MQ=255)       cACGCTCGGTCAGGTGGTACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGAcc                                                                                                                                                                                                                       <  1:65420/236‑1 (MQ=255)                       gtACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGCGATg                                                                                                                                                                                                        >  1:1076388/1‑235 (MQ=255)                        tACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCAAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGAt                                                                                                                                                                                                         <  1:726605/233‑1 (MQ=255)                           ttGAGGAGCGCCGACAGCCCCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGcg                                                                                                                                                                                                                                      >  1:143921‑M2/1‑199 (MQ=255)                             gAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGt                                                                                                                                                                                                              >  1:1216666/1‑223 (MQ=255)                             gAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGc                                                                                                                                                                                                 >  1:1109069/1‑236 (MQ=255)                             gAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGc                                                                                                                                                                                                 >  1:1335757/1‑236 (MQ=255)                             gAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGc                                                                                                                                                                                                 >  1:730565/1‑236 (MQ=255)                                 aTCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCg                                                                                                                                                                                                   >  1:1114094/1‑230 (MQ=255)                                 aTCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTGGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCAc                                                                                                                                                                                             >  1:266329/1‑236 (MQ=255)                                     ccGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGAc                                                                                                                                                                                         >  1:1422587/1‑236 (MQ=255)                                      cGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACa                                                                                                                                                                                        >  1:941451/1‑236 (MQ=255)                                         cAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAgg                                                                                                                                                                                      <  1:594055/235‑1 (MQ=255)                                         cAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAgg                                                                                                                                                                                      <  1:1172691/235‑1 (MQ=255)                                              ccGAGGGCTTTTCGCCCAGGTCCCCGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCcttcg                                                                                                                                                                                                                               <  1:149558‑M1/189‑6 (MQ=255)                                                           gCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAg                                                                                                                                                                                       >  2:851359/1‑216 (MQ=255)                                                                 gcccacGGCCTTGGCGGTCAGCAGGCGGGAACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGcggcaccggtgccgccaagtacacc                                                                                                                                                                                                               >  1:157882‑M2/3‑161 (MQ=255)                                                                   ccACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCa                                                                                                                                                                                                                >  2:540546/1‑183 (MQ=255)                                                                   ccACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCt                                                                                                                                                             <  2:1422584/234‑1 (MQ=255)                                                                               cGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGcg                                                                                                                                                                                                                                      >  2:526611‑M2/1‑147 (MQ=255)                                                                               cGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGc                                                                                                                                                     >  1:478464/1‑230 (MQ=255)                                                                               cGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCG                                                                                                                                                                                                                                      >  1:526613‑M1/1‑149 (MQ=255)                                                                                ggTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCG                                                                                                                                                                                                                                >  2:657506‑M1/1‑154 (MQ=255)                                                                                   ccgcagGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCt                                                                                                                                                             <  1:30192/216‑1 (MQ=255)                                                                                      cagGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATggc                                                                                                                                                                                                      >  2:34130/1‑173 (MQ=255)                                                                                            ggCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATc                                                                                                                                   <  1:1504232/235‑1 (MQ=255)                                                                                             gCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGAcc                                                                                                                                                                                                                       <  2:757630/150‑1 (MQ=255)                                                                                                   tCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGcc                                                                                                                                                         >  1:389789/1‑206 (MQ=255)                                                                                                   tCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGt                                                                                                                            <  1:539667/235‑1 (MQ=255)                                                                                                      aTCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTACCGACCGCCGGcg                                                                                                                                                                                                                >  2:943184/1‑147 (MQ=255)                                                                                                                cGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAgg                                                                                                                                                                                      >  1:983599/1‑164 (MQ=255)                                                                                                                cGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAgg                                                                                                                                                                                      <  2:983597/164‑1 (MQ=255)                                                                                                                cGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATTGCCTGGCCACCGATCAGGAAGTCCAGc                                                                                                                       >  1:145986/1‑227 (MQ=255)                                                                                                                        ccAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCtt                                                                                                       >  1:521297/1‑235 (MQ=255)                                                                                                                         cAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTg                                                                                                     <  1:1253134/236‑1 (MQ=255)                                                                                                                            tGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCTGGCATTAAGATTGCGGGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCAtggcctggc                                                                                                                                           <  2:1399621/195‑1 (MQ=255)                                                                                                                            tGCGTGCCAGCGATTCCTGGATGCCTGCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCCGCCCACCGACAgg                                                                                                                                                                                      <  2:49475/152‑1 (MQ=255)                                                                                                                             gCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGGGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGCgagag                                                                                                                                                                                                         >  2:357428/1‑131 (MQ=255)                                                                                                                                tGCCGGCGTTTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCt                                                                                                                                                             <  1:253376/173‑1 (MQ=255)                                                                                                                                    aGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGcggcaccggtgccgccaagtacaccagcctggtgaccggccagtacgccaatatccgcgagcagttca                                                                                                                                                                    >  2:572535‑M2/1‑94 (MQ=255)                                                                                                                                    aGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCG                                                                                                                                                                                                                          <  2:759800‑M1/108‑1 (MQ=255)                                                                                                                                                     ttCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTg                                                                                            <  1:1242638/217‑1 (MQ=255)                                                                                                                                                      tCGAAGGCCGCTAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGCGCCGACCGCCGGCAGTGCGATg                                                                                                                                                                                                        >  1:258224/1‑108 (MQ=255)                                                                                                                                                        gAAGGCCGCCAATGGCACGTTGAACTGCTGGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGcggcaccggtgccgccaagtacaccagcctggtgacc                                                                                                                                                                                                   >  1:184193‑M2/1‑74 (MQ=255)                                                                                                                                                         aaGGCCGCCAATGGCCCGTTGAACTGCTCGCGGATATGGGCGTACTGGCCGGTCACCAGGCTGGTGTACTGGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCg                                                                                                                                                        <  1:289322/153‑1 (MQ=255)                                                                                                                                                              cgccAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAAcat                                                                                                                                                                        <  1:1166054/132‑1 (MQ=255)                                                                                                                                                                 cAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGGGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGaa                                                                              >  2:891953/1‑219 (MQ=255)                                                                                                                                                                 cAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCa                                                             >  1:628773/1‑236 (MQ=255)                                                                                                                                                                 cAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACAGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACGCGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCg                                                                >  2:1396749/1‑233 (MQ=255)                                                                                                                                                                            tGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGccaagtacaccagcctggtgaccggccagtacgccaatatccgcgagcagttcaacgtgccattggcggccttcgaaggcatccaggaatcgct                                                                                                                            >  2:572535‑M1/1‑68 (MQ=255)                                                                                                                                                                                cTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGttt                                                   <  2:941449/231‑1 (MQ=255)                                                                                                                                                                                      gcgGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTg                                                                                            >  1:1020650/1‑184 (MQ=255)                                                                                                                                                                                       cgGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCCGTCCATCAACATCATCCAGCCCTGGCCGCGCAt                                                                                                                                                   >  2:68113/1‑128 (MQ=255)                                                                                                                                                                                        ggATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACCGGCAGTTCATCAACATCATCCAGCCCGTGCCGCGCATGGCCTGGCCACCGATCAGGAAGt                                                                                                                            >  2:261872/1‑150 (MQ=255)                                                                                                                                                                                        ggATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCAt                                                                                 >  1:877360/1‑193 (MQ=255)                                                                                                                                                                                                   tACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGccaagtacaccagcctggggaccgg                                                                                                                                                                                                 >  2:1489846‑M1/1‑45 (MQ=255)                                                                                                                                                                                                       ggCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAgg                                                                                                                                                                                      >  1:764364/1‑77 (MQ=255)                                                                                                                                                                                                       ggCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAgg                                                                                                                                                                                      <  2:764362/77‑1 (MQ=255)                                                                                                                                                                                                         ccGGTCCCCAGGCTGGTGTACTTGGcggcaccggtgccgccaagtacaccagcctggtgaccggccagta                                                                                                                                                                                           >  2:1489846‑M2/1‑25 (MQ=255)                                                                                                                                                                                                         ccGGTCACCA‑GCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTgggg                    <  1:1079718/236‑1 (MQ=255)                                                                                                                                                                                                           ggTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGccaagtacaccagcctggtgaccggccagtacgccaatatccgccagcagttcaacgtgccattggcggccttc                                                                                                                                                >  1:184193‑M1/1‑37 (MQ=255)                                                                                                                                                                                                                ccAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTGGGGATCAgg              >  1:45538/1‑236 (MQ=255)                                                                                                                                                                                                                    gCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTGGGGATCAGGGCCa          <  1:851361/236‑1 (MQ=255)                                                                                                                                                                                                                     cTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGCTCTCGACGCCGGGCGTGGCGGCGGGGATCAGGGCCAg         >  1:680943/1‑236 (MQ=255)                                                                                                                                                                                                                       ggTGTACTTGGCGGCACCGGTGCCGccaagtacaccagcctggtgaccggccagtacgccaatatccgcgagcagttcaacgtgccattggcggccttcgaaggcatccaggaatcgctggcacgcattggcggcaacgcctggctgatggacagttcccgcctgctgaccgccaaggccgtgggc                                                         >  1:157882‑M1/1‑25 (MQ=255)                                                                                                                                                                                                                        gtgtACTGGGCGGAACGGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACa                                                                                                                                                                                        <  2:124065/58‑1 (MQ=255)                                                                                                                                                                                                                          gtACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTGGGGAt                  >  1:24552/1‑222 (MQ=255)                                                                                                                                                                                                                            aCTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTGGGGATCAGGGCCAGGCTGATg  <  1:845731/236‑1 (MQ=255)                                                                                                                                                                                                                               tGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCg                               <  1:41448/204‑1 (MQ=255)                                                                                                                                                                                                                                 gcggcACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTgggg                                                                                         <  1:403094/144‑1 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                       CGCGGCCACGCTCGGTCAGGTGGTACTTGAGGATCGCCGACAGCACCGAGGGCTTTTCGCCCAGGTCCACGGCCTTGGCGGTCAGCAGGCGGGCACTGTCCATCAGCCAGGCGTTGCCGCCAATGCGTGCCAGCGATTCCTGGATGCCTTCGAAGGCCGCCAATGGCACGTTGAACTGCTCGCGGATATTGGCGTACTGGCCGGTCACCAGGCTGGTGTACTTGGCGGCACCGGTGCCGACCGCCGGCAGTGAGATGGAGCGGCCCACCGACAGGCAGTTCATCAACATCATCCAGCCCTTGCCGAGCATGGCCTGGCCACCGATCAGGAAGTCCAGCGGTACGAACACGTCTTTGCCGCTGTTGGGGCCGTTCATGAAGGCGGCGCCCAGCGGCAGGTGGCGTTTGCCGATCTCGACGCCGGGCGTGTCGGTGGGGATCAGGGCCAGGCTGATG  >  AE015451/2135361‑2135815

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.