New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4024295 =	40 (0.470)	5 (0.060)	5/340	NT	11.9%	coding (214/1536 nt)	emrB	multidrug efflux transport system ‑ permease subunit
	?	AE015451	4024328 =	36 (0.440)					coding (181/1536 nt)	emrB	multidrug efflux transport system ‑ permease subunit

GGGGTAGACAGCAATCAGCAGGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAGCGGCGTTGTTGCTCATCGTTGCGCCGTCTTGCC  >  AE015451/4024107‑4024525                                                                                                                                                                                                                              |                                                                                                                                                                                                      ggggTAGACAGCAATCAGCAGGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGtgat                                                                                                                                                                                           <  2:774104/234‑1 (MQ=255)   ggTAGACAGCAATCAGCAGGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGAcc                                                                                                                                                                                       <  1:304261/236‑1 (MQ=255)               tCAGCAGGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTg                                                                                                                                                                            >  1:1026388/1‑235 (MQ=255)               tCAGCAGGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGc                                                                                                                                                                           >  1:443402/1‑236 (MQ=255)                    agGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTa                                                                                                                                                                      >  1:1256505/1‑236 (MQ=255)                              tCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGtgatg                                                                                                                                                                                          >  1:597071/1‑206 (MQ=255)                              tCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGGGATGACCCAAGTGCCTTGCTCGTCGCTCAcccc                                                                                                                                                             >  1:387660/1‑235 (MQ=255)                                               ctgctgctgacccccatcggcctgtcgctcgcgacgttcatgcaggtgctggacaccaccatcgccaacgtagccctgccgaccatttccggcaacctgggggtgagctacgagcaaggcacttgggtcatcacctcgttcgcggtcagcaacgctatcgccttgccgctgaccgCGAACGAGGt                                                                                                                                                                                              <  1:284865‑M2/10‑1 (MQ=255)                                                 ggCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCg                                                                                                                                         >  1:828932/1‑236 (MQ=255)                                                  gCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCg                                                                                                                                         >  1:946409/1‑235 (MQ=255)                                                  gCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCGCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAAc                                                                                                                                                                                                   <  2:49054/177‑1 (MQ=255)                                                                      acGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGAtgg                                                                                                                    <  1:17074/236‑1 (MQ=255)                                                                       tcgctcgcgactttcatgcaggtgctggacaccaccatcgccaacgtagccctgccgaccatttccggcaacctgggggtgagctacgagcaaggcacttgggtcatcacctcgttcgcggtcagcaacgctatcgccttgccgctgaccgCGAACGCGGtgatga                                                                                                                                                                                         >  1:1426939‑M2/152‑166 (MQ=255)                                                                       cGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACcgc                                                                                                                                                                                                       >  2:145789/1‑152 (MQ=255)                                                                        gAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGAtg                                                                                                                     <  2:946407/233‑1 (MQ=255)                                                                                accaGCTCGGGCATCGACTGGGCAATACCGCACAGGACCGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATgg                                                                                                                                            <  2:461681/202‑1 (MQ=255)                                                                                         ggCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCAc                                                                                                       >  1:881235/1‑230 (MQ=255)                                                                                               gACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGgtgt                                                                                                              <  1:271747/217‑1 (MQ=255)                                                                                                        aTACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGc                                                                                                                                                     >  1:605868/1‑169 (MQ=255)                                                                                                             cgccaacgtagccctgccgaccatttccggcaacctgggggtgagctacgagcaaggcacttgggtcatcacctcgttcgCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAGGTg                                                                                                                                                                                 <  2:1326992‑M1/56‑1 (MQ=255)                                                                                                                 aGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTgg                                                                                                                          >  1:1134946/1‑187 (MQ=255)                                                                                                                 aGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTc                                                                                          >  1:1172864/1‑219 (MQ=255)                                                                                                                 aGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCgcgag                                                                                     >  2:629932/1‑224 (MQ=255)                                                                                                                    gtagccctgccgaccatttccggcaacctgggggtgagctacgagcaaggcacttgggtcatcacctcgttcgCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCGAGTGCCTTGCTGGTAGCTCAc                                                                                                                                                                <  2:1458223‑M1/73‑1 (MQ=255)                                                                                                                    aaCGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGAtg                                                                                                                     <  1:463857/189‑1 (MQ=255)                                                                                                                      cgacgCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGtt                                                                                                                                                       >  2:917378/1‑153 (MQ=255)                                                                                                                           ccAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTcagc                                                               >  1:760688/1‑236 (MQ=255)                                                                                                                                   atttccggcaacctgggggtgagctacgcgcaaggcacttgagtcatcagctcgttcgcggtcagcaacgctatcgccttgccgctgaccgCGAACGTGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAAt                                                                                                                                              <  2:1426936‑M2/58‑1 (MQ=255)                                                                                                                                   atttccggcaacctgggggtgagctacgagcaaggcacttgggtcatcaccacgttcgCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGCTGATGACTCAAGTGCCTTGCGCGTAGCTCACCCCCAGGTTGCCGGAAAt                                                                                                                                              <  2:1426936‑M1/91‑1 (MQ=255)                                                                                                                                   aaCAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTAc                                                                                                                               <  2:181751/164‑1 (MQ=255)                                                                                                                                   aaCAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGAc                                                        <  1:912306/235‑1 (MQ=255)                                                                                                                                                   aGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTGAGCAGCAGa                                                         >  1:334359/1‑218 (MQ=255)                                                                                                                                                     gtgagctaccagcaaggcactcgggtcatcacctcgttcgcggtcagcaacgctatcgccttgccgctgaccgCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTAc                                                                                                                               <  2:1458223‑M2/73‑1 (MQ=255)                                                                                                                                                       gAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTggg                                      <  2:905064/233‑1 (MQ=255)                                                                                                                                                        aaCAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATggtggt                                                                   >  2:1230799/1‑203 (MQ=255)                                                                                                                                                                  cttcacCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGAcc                                                                                >  1:1238605/1‑179 (MQ=255)                                                                                                                                                                  cttcacCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGa                                                         >  1:447288/1‑203 (MQ=255)                                                                                                                                                                  cttcacCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAGCGGCgttgtt                         >  1:877193/1‑235 (MQ=255)                                                                                                                                                                   ttcacCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCTAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCggcggc                                                >  2:411558/1‑211 (MQ=255)                                                                                                                                                                      cacctgggtcatcacctcgttcgcggtcagcaacgctatcgccttgccgctgaccgCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCg                                                                                                                        <  2:1326992‑M2/80‑1 (MQ=255)                                                                                                                                                                        cAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCA‑CCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAGCGGCGTTGTGGCTCATCg                 >  1:479994/1‑236 (MQ=255)                                                                                                                                                                         acaGCGCCGGCTCAGCCAGCCGGCCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGAtggt                                                                      <  2:473472/181‑1 (MQ=255)                                                                                                                                                                          aaGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAGCGGCGTTGTTGCTCATCGt                >  1:53530/1‑236 (MQ=255)                                                                                                                                                                              tcatcaccgcgttcgCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAAAGTCgcgagcga                                                                                  >  1:1426939‑M1/16‑166 (MQ=255)                                                                                                                                                                                   acctcgttcgCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGGGGTcagcagcag                                                          <  1:284865‑M1/175‑1 (MQ=255)                                                                                                                                                                                       gccggccgGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACa                                                                                <  2:146050/159‑1 (MQ=255)                                                                                                                                                                                             CGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGa                                                                                                                                                                                                     >  2:574466‑M1/1‑36 (MQ=255)                                                                                                                                                                                                      gCAAGGCGAGAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGAc                                                        <  2:332237/168‑1 (MQ=255)                                                                                                                                                                                                              aTAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAgcgg                                <  2:877191/184‑1 (MQ=255)                                                                                                                                                                                                                 gCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGcc                                                                            >  2:177280/1‑137 (MQ=255)                                                                                                                                                                                                                       ctgaccgCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGCTGGCGATGGCGGTGTCCAGCACCTGCATGATCGTCGCGAGCGACGGGCCGATGGTGGTCAGCAGCAGACtcggcc                                                  >  2:483494‑M2/8‑156 (MQ=255)                                                                                                                                                                                                                        tgaccgCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAGCGGCGTTGTTGCTCATCGTTGCGCCGTCTTGcc  >  2:692508‑M2/7‑204 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                      GGGGTAGACAGCAATCAGCAGGGTCTGGGTCATCGGATAAAGCGGTCCGGCGACCACGCCCTGCAAGACACGAAAGCCCACCAGCTCGGGCATCGACTGGGCAATACCGCACAGGAACGACGCCAGCACGAACAGCAGCGTGGCCCAGATGAACAGCTTCACTTCACCAAAGCGCCGGCTCAGCCAGCCGGTCAGCGGCAAGGCGATAGCGTTGCTGACCGCGAACGAGGTGATGACCCAAGTGCCTTGCTCGTAGCTCACCCCCAGGTTGCCGGAAATGGTCGGCAGGGCTACGTTGGCGATGGTGGTGTCCAGCACCTGCATGAACGTCGCGAGCGACAGGCCGATGGTGGTCAGCAGCAGACTCGGCGGCGTGAACTGGGCAGCGGCGTTGTTGCTCATCGTTGCGCCGTCTTGCC  >  AE015451/4024107‑4024525

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.