New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 5225862	77 (0.900)	12 (0.150)	11/336	NT	14.9%	coding (100/876 nt)	PP_4605	Transcriptional regulator, AraC family
	?	AE015451	= 5225953	64 (0.790)					coding (191/876 nt)	PP_4605	Transcriptional regulator, AraC family

AGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGACCCGCAGCAGGCTGGCCGCTTTCGTCAAT  >  AE015451/5225737‑5226186                                                                                                                                                                                                                         |                                                                                                                                                                                                                                          aGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGc                                                                                                                                                                                                                         >  1:1268064/1‑235 (MQ=255)           gcaAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTg                                                                                                                                                                                                              <  1:1217553/236‑1 (MQ=255)             aaGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTgcg                                                                                                                                                                                                            >  1:1498997/1‑236 (MQ=255)                   aCCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGAc                                                                                                                                                                                                      <  1:1188487/236‑1 (MQ=255)                                         ccAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGCTgcccggcc                                                                                                                                                                                <  1:498954/236‑6 (MQ=255)                                              tGCAAGTGTTCAACGCCATGCATGCCTCGCCCAGTGCCAGGCTGGAGCTGAGCGCGCCCCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATgccggccg                                                                                                                                                                                <  1:213074/231‑1 (MQ=255)                                              tGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATgccggccg                                                                                                                                                                                <  2:922392/231‑1 (MQ=255)                                              tGCAAGTGGTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACa                                                                                                                                                                                                     <  1:214339/210‑1 (MQ=255)                                                     gtTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCg                                                                                                                                                                                            >  2:653874/1‑212 (MQ=255)                                                       tCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattg                                                                                                                                                                                         >  1:1412171‑M2/1‑163 (MQ=255)                                                       tCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGa                                                                                                                                                                    <  2:598014/234‑1 (MQ=255)                                                          aCGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAg                                                                                                                                                                                                   >  2:1102448/1‑200 (MQ=255)                                                          aCGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGccgcg                                                                                                                                                                                              >  2:532476/1‑201 (MQ=255)                                                              catgcatgCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgcc                                                                                                                                                                                                                                      <  2:1110070‑M2/161‑6 (MQ=255)                                                                  catgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACac                                                                                                                                                                                                    >  1:1333817/1‑190 (MQ=255)                                                                   atgcCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGgtcg                                                                                                                                                           >  1:716493/1‑231 (MQ=255)                                                                             cAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATcc                                                                                                                                            <  1:69147/236‑1 (MQ=255)                                                                              aaTGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAAt                                                                                                                                                                       >  1:219558/1‑208 (MQ=255)                                                                              aaTGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGGGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCtgtt                                                                                                                                                                                              >  1:85723/1‑184 (MQ=255)                                                                                tGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGcc                                                                                                                                         <  1:760964/236‑1 (MQ=255)                                                                                  ccAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCt                                                                                                                                        <  1:850724/235‑1 (MQ=255)                                                                                     ggCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAGTCGAACTGGGTCGTCAATGGCGCGATCCGCCt                                                                                                                                        <  2:1436816/232‑1 (MQ=255)                                                                                         ggAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGGTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTCCATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCtgtg                                                                                                                                                                                              >  2:179064/1‑174 (MQ=255)                                                                                          gAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACAcc                                                                                                                                <  1:331593/235‑1 (MQ=255)                                                                                             cTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCGGCGCGt                                                                                                                                                                                           >  2:566536/1‑173 (MQ=255)                                                                                             cTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTAGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattg                                                                                                                                                                                         >  1:1195315‑M2/1‑125 (MQ=255)                                                                                                  cgcgcACCTGGGCGACTGACTGTCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccag                                                                                                                                                                                                   >  1:2989‑M2/1‑120 (MQ=255)                                                                                                  cgcgcACCTGGGCGACGGACTGGCGGCGGAGTTGTGGAGCAACCGTGACGATGCGCGCGACTCCCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCtgt                                                                                                                                                                                               <  2:381026/164‑1 (MQ=255)                                                                                                   gcgcACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGt                                                                                                                                                                                                               >  2:190594/1‑147 (MQ=255)                                                                                                   gcgcACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTgg                                                                                                                                      <  2:1268061/220‑1 (MQ=255)                                                                                                   gcgcACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTgg                                                                                                                                      >  2:750687/1‑220 (MQ=255)                                                                                                   gcgcACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAg                                                                                                                      >  1:446325/1‑236 (MQ=255)                                                                                                   gcgcACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAg                                                                                                                      >  1:784413/1‑236 (MQ=255)                                                                                                   gcgcACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGAGCGCCCGa                                                                                                                                                                                                       >  2:179633/1‑155 (MQ=255)                                                                                                   gcgcACCGGGGCGACGGACGGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgc                                                                                                                                                                                                                                       >  2:15387‑M2/1‑119 (MQ=255)                                                                                                        ccTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCACCCGTGACGATGCGCGCGACTTCCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAgc                                                                                                                                                                                                                                <  1:1357010/125‑1 (MQ=255)                                                                                                            ggCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGcac                                                                                                              <  1:790707/235‑1 (MQ=255)                                                                                                             gCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATgg                                                                                                                                                    >  2:607601/1‑196 (MQ=255)                                                                                                             gCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTg                                                                                                                                       <  1:1050656/209‑1 (MQ=255)                                                                                                               gccGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGccc                                                                                                                                                                                                                            <  1:165585/120‑1 (MQ=255)                                                                                                                    aCTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGcc                                                                                                                                    >  2:623061/1‑204 (MQ=255)                                                                                                                              gcgTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattgggcgaggcatgcatggcgttgaacacttgc                                                                                                                                                           >  1:1109809‑M2/1‑92 (MQ=255)                                                                                                                              gcgTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattgggcgaggcatgcatggcgttgaacacttgc                                                                                                                                                           <  2:1109806‑M2/172‑81 (MQ=255)                                                                                                                                  atccgttcgaCCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTAc                                                                                         >  2:693487/10‑234 (MQ=255)                                                                                                                                    tgGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCt                                                                                     <  1:623991/236‑1 (MQ=255)                                                                                                                                              gTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACt                                                                                                                                                                 >  2:182452/1‑150 (MQ=255)                                                                                                                                              gTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATg                                                                                                                                                     >  2:969020/1‑162 (MQ=255)                                                                                                                                               tGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGGCGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCt                                                                                     <  2:1025054/225‑1 (MQ=255)                                                                                                                                                   gATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTg                                                                                                                                       <  2:1194526/171‑1 (MQ=255)                                                                                                                                                         cgcgACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtagcgtcatgggcgggtc                                                                                                                              <  2:95627‑M2/174‑110 (MQ=255)                                                                                                                                                           agACTACCAGGCGCCTAGCCATCACACCTTGACGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGgcgc                                                                                                                                                 >  2:920643/2‑153 (MQ=255)                                                                                                                                                            gACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGTTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGCATCGacc                                                                                                                                                                  >  1:105690/1‑133 (MQ=255)                                                                                                                                                                 cccGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCCCCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctcca                                                                                                                                                                                                    >  1:131342‑M2/1‑57 (MQ=255)                                                                                                                                                                  cgggCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCt                                                                                     <  2:1465519/204‑1 (MQ=255)                                                                                                                                                                           aGCGATCACACCCTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgcctccagtccgtcggccacgtgcgcgctcagctccagcctggcattgggcgaggcctgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcgtgccatcctactgcgcc                                                                                                     <  2:761227‑M2/181‑135 (MQ=255)                                                                                                                                                                             ccATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattgggcgaggcatgcatggcgttgaacact                                                                                                                                                              >  1:440651‑M2/1‑45 (MQ=255)                                                                                                                                                                                  acacCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCACTGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCt                                                                                     <  2:774721/190‑1 (MQ=255)                                                                                                                                                                                     ccgtGTCGTGCTACAGCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCt                                     <  1:873923/232‑1 (MQ=255)                                                                                                                                                                                     ccTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAg                                                   >  2:652414/1‑221 (MQ=255)                                                                                                                                                                                      cTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCggg                                                                                                                                                                              <  1:301783/97‑1 (MQ=255)                                                                                                                                                                                           cGTGCTACATCGCCGACGGCACCGTCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCCCGATCCGCCTGGca                                                                                                                                    >  1:701312/1‑134 (MQ=255)                                                                                                                                                                                           cGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCtgtg                                                                                            >  2:89147/1‑174 (MQ=255)                                                                                                                                                                                            gTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACCCCTGTATGTCAGCGAGGCACAGTTCGCCCt                                                                                                    <  1:214670/165‑1 (MQ=255)                                                                                                                                                                                            gTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGAcc                             >  1:583963/1‑236 (MQ=255)                                                                                                                                                                                              gCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTg                                                                                                                                       <  1:75176/128‑1 (MQ=255)                                                                                                                                                                                              gCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTg                                                                                                                                       >  2:75176/1‑128 (MQ=255)                                                                                                                                                                                              gCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGcac                                                                                                              <  2:1013546/153‑1 (MQ=255)                                                                                                                                                                                               cTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGAACGACCCg                           <  1:693489/235‑1 (MQ=255)                                                                                                                                                                                                 aCATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGACCCgcag                        >  1:1161700/1‑236 (MQ=255)                                                                                                                                                                                                    ccGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATTCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTg                                    <  1:370431/220‑1 (MQ=255)                                                                                                                                                                                                     cGCCGACGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcctgccatcctactgcgccctggatcgagtgacagctaccggcgcaagaaaagcgcaagtttgtgcaagcagccagaggccgatcgcaagaacactggtg                    <  1:1277748‑M2/236‑216 (MQ=255)                                                                                                                                                                                                      gccgccGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGcc                                                                                                                                         <  2:192821/118‑1 (MQ=255)                                                                                                                                                                                                       ccGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGACCCGCAGCAGGCt                  >  1:1450524/1‑236 (MQ=255)                                                                                                                                                                                                          aCGGCACCGGCACCTTccgccgccagtccgtcgcccaggtgcgcgctcagctccagcctggcattgggcgaggcatgcatggcgttgaacacttgcaactgggtgagtggcgtcatgggcgggtcctcttgcctgccatcctactgcgccct                                                                                                   <  1:451998‑M2/152‑137 (MQ=255)                                                                                                                                                                                                           cggcaccggcacCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTa                                                                                                                            <  1:272785/126‑1 (MQ=255)                                                                                                                                                                                                               accggcaccTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCt                                                                                                                                        <  2:248917/110‑1 (MQ=255)                                                                                                                                                                                                                 cggcaccTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAg                                               <  1:377591/197‑1 (MQ=255)                                                                                                                                                                                                                   gcaccTTccgccgccagtcggtcgcccaggtgcgcgctcagctccagcctggcattgggcga                                                                                                                                                                                    >  1:1328332‑M2/1‑7 (MQ=255)                                                                                                                                                                                                                    caccTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGACCCGCAGCAGGCTGGCCGCTTTCGTc     <  1:1233195/236‑1 (MQ=255)                                                                                                                                                                                                                    caccTCCCGCCGCCGGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCt                                     <  1:150598/204‑1 (MQ=255)                                                                                                                                                                                                                       cTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGACCCGCAGCAGGCTGGCCGCTTTCGTCAAt  <  1:595498/236‑1 (MQ=255)                                                                                                                                                                                                                         |                                                                                                                                                                                                                                          AGGATGGCAGGCAAGAGGACCCGCCCATGACGCCACTCACCCAGTTGCAAGTGTTCAACGCCATGCATGCCTCGCCCAATGCCAGGCTGGAGCTGAGCGCGCACCTGGGCGACGGACTGGCGGCGGCGTTGTGGAGCAACCGTGACGATGCGCGCGACTACCAGGCGCCTAGCCATCACACCTTGTCGTGCTACATCGCCGACGGCACCGGCACCTTCCGCCGCCAGCGCCCGGCCGACAAAGGTGCGCCCGACAAGCTGTGCGTGATGCCGGCCGGGCAGGAATCGAACTGGGTCGTCAATGGCGCGATCCGCCTGGCACACCTGTATGTCAGCGAGGCACAGTTCGCCCTGGGCTGTGTACGCCTGCTCGACCGGGAACCGCGCGAGCTGCAACTGCAGGAAGCGACCTTTCTGGACGACCCGCAGCAGGCTGGCCGCTTTCGTCAAT  >  AE015451/5225737‑5226186

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.