New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5566266 =	54 (0.630)	8 (0.100)	5/338	NT	13.2%	coding (1220/1899 nt)	mutL	DNA mismatch repair protein MutL
	?	AE015451	5566322 =	54 (0.660)					coding (1164/1899 nt)	mutL	DNA mismatch repair protein MutL

GGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCAT  >  AE015451/5566102‑5566554                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         ggCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGa                                                                                                                                                                                                                            >  1:599136/1‑235 (MQ=255)    cAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGt                                                                                                                                                                                                                        >  1:282251/1‑236 (MQ=255)     aaCAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGtt                                                                                                                                                                                                                       <  1:596837/236‑1 (MQ=255)                       gATGTAGATACCCTTGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGt                                                                                                                                                                                                      >  1:927799/1‑235 (MQ=255)                                    ttGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGc                                                                                                                                                                                          >  2:1095754/1‑234 (MQ=255)                                    ttGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGa                                                                                                                                                                                        >  1:823042/1‑236 (MQ=255)                                        gCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCgggg                                                                                                                                                                                                                 >  1:607341/1‑207 (MQ=255)                                             gcCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTGTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCa                                                                                                                                                                                   <  2:785311/232‑1 (MQ=255)                                               cAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCAt                                                                                                                                                                                                                                      >  1:877256/1‑179 (MQ=255)                                               cAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCAc                                                                                                                                                                                              >  2:1386444/1‑219 (MQ=255)                                               cAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGGTCAAGCACCggg                                                                                                                                                                                          >  2:361960/1‑222 (MQ=255)                                               cAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACGGTTGCgggg                                                                                                                                                                                                                 >  2:587580/1‑200 (MQ=255)                                               cAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGGGGGGTGTATTGATACTGGGAACCGGCGCCGCTGCCAGCATTGGAAAACGACTGTTGCGGGGCGCGAGGCTgg                                                                                                                                                                                                      >  1:160759/1‑210 (MQ=255)                                                     cggttcgccccaccggccagcaggccggtgagttcgggccccagggtgaaatgcgcctggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccACCATTGGaaaa                                                                                                                                                                                                                               <  2:873424‑M2/12‑1 (MQ=255)                                                       gttcgcccccccggccagcaggccggtgagttcgggccccagggtgaaatgcgcctggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccACCATTGGAAAACGACTGtt                                                                                                                                                                                                                       <  1:282650‑M2/20‑1 (MQ=255)                                                        gCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCg                                                                                                                                                                                                             <  1:452923/195‑1 (MQ=255)                                                                accggcctgctggccggtgagttcgggccccagggtgaaatgcgcctggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAg                                                                                                                                                                                       <  1:568772‑M2/52‑1 (MQ=255)                                                                     aTGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACt                                                                                                                                                        >  1:1267531/1‑235 (MQ=255)                                                                      tGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGcc                                                                                                                                                              >  1:25673/1‑228 (MQ=255)                                                                           ggccggtgagttcgggccccagggtgaaatgcgcctggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccgcgtccctcgcagccgctgccACCATTGGaaaa                                                                                                                                                                                                                               <  2:1457540‑M2/12‑1 (MQ=255)                                                                                     ttcgggccccagggtgaaatgcgcctggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccACCATTGGAAAACGACTGtt                                                                                                                                                                                                                       <  1:381270‑M2/20‑1 (MQ=255)                                                                                             gCCGTCGCATGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAGCGACTGTTGCgggg                                                                                                                                                                                                                 >  2:1194835/1‑154 (MQ=255)                                                                                                    cAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTg                                                                                                                                    <  1:731911/224‑1 (MQ=255)                                                                                                    cAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCa                                                                                                                          >  1:872232/1‑234 (MQ=255)                                                                                                       tcgcAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGACAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCg                                                                                                                               <  1:987136/225‑1 (MQ=255)                                                                                                       gcgcAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGc                                                                                                                                                 <  2:1516883/208‑1 (MQ=255)                                                                                                         gcagcaCCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCa                                                                                                                     >  2:115472/1‑234 (MQ=255)                                                                                                          cgcctggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCa                                                                                                                                                                                   <  1:439588‑M2/56‑1 (MQ=255)                                                                                                            gcaCCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGAGGGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAgg                                                                                                                   <  1:745310/234‑1 (MQ=255)                                                                                                             tggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGgcg                                                                                                                                                                               <  1:439588‑M1/116‑1 (MQ=255)                                                                                                              ggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCg                                                                                                                                                                                         <  1:1036211‑M1/106‑1 (MQ=255)                                                                                                              ggcctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATGGATACTGGTAACCGGCGCCGCTGCCACCATGGGAAAACGACTGTTGCGGGGCGCGAGGCTgtg                                                                                                                                                                                                     <  1:148855‑M1/94‑2 (MQ=255)                                                                                                              aCCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACgg                                                                                                              >  1:644081/1‑236 (MQ=255)                                                                                                                 ctcgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCAGCAGGCCGGt                                                                                                                                     <  1:568772‑M1/158‑1 (MQ=255)                                                                                                                    cgccggtgcttgaacagcctcgagccccgcaacagtcgttttccaatggtggcagcggcgccggttaccagtatcaatacaccccacgtccctcgcagccgctgccACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGcc                                                                                                                                                                                    <  1:1036211‑M2/55‑1 (MQ=255)                                                                                                                      ccAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAg                                                                                                                         >  2:642830/1‑217 (MQ=255)                                                                                                                            gCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGcc                                                                                                                                                              <  2:1432973/174‑1 (MQ=255)                                                                                                                             cTTATGGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTTGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGc                                                                                                                                                 <  2:825726/186‑1 (MQ=255)                                                                                                                                cacagcctcgcgccccgcaacagtcgttttcccatggtggcagcggcgccggttaccagtatccatacaccccacgtccctcgcagccgctgccACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGcc                                                                                                                                                                                    <  1:148855‑M2/55‑1 (MQ=255)                                                                                                                                    accgcgcgATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCggg                                                                                                                                                                                                                  <  2:199495/110‑1 (MQ=255)                                                                                                                                    aaCGCGCGATGCACCGCCTGTGCCTCTGCGGCCGGCAGGGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTc                                                                                                                                                       <  2:17987/173‑1 (MQ=255)                                                                                                                                     aCTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGGCTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAg                                                                                                                                                                                       <  2:1195857/140‑1 (MQ=255)                                                                                                                                       tCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTg                                                                                                                                    <  1:1522315/189‑1 (MQ=255)                                                                                                                                       tCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTc                                                                                        <  2:1449575/233‑1 (MQ=255)                                                                                                                                         gcgATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGa                                                                                                                              >  2:454543/1‑193 (MQ=255)                                                                                                                                                 aacagtcgttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGaa                                                                                                                                                          <  1:381270‑M1/137‑1 (MQ=255)                                                                                                                                                 aacagtcgttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGGGGGGCGAAc                                                                                                                            <  1:282650‑M1/167‑1 (MQ=255)                                                                                                                                                  cGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGccac                                                                                                                                                                                                                                         <  2:213233/77‑1 (MQ=255)                                                                                                                                                    ccTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCAcc                                                                                                                                                                                             <  2:966833/119‑1 (MQ=255)                                                                                                                                                         ttttccaatggtGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAaccg                                                                                                                          <  2:873424‑M1/169‑2 (MQ=255)                                                                                                                                                         ttttccaatggtGGCAGCGGCTGCGA‑GGGACGCGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGcc                                                                                                                                                <  2:1457540‑M1/147‑1 (MQ=255)                                                                                                                                                          ccTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAg                                                                  >  1:563891/1‑236 (MQ=255)                                                                                                                                                           ctctGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCa                                                                    >  2:1489094/1‑233 (MQ=255)                                                                                                                                                            gctGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCg                                                                                   <  2:1331251/216‑1 (MQ=255)                                                                                                                                                               gCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAg                                                                  <  2:823040/231‑1 (MQ=255)                                                                                                                                                                gggccggcAGCGGCTGCGA‑GGGACGTGGGGTGTATTGAGACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACgg                                                                                                              <  2:58481/185‑1 (MQ=255)                                                                                                                                                                cggccggcAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGgccgca                                                                                                         >  2:951892/1‑191 (MQ=255)                                                                                                                                                                  gccggcAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGt                                                           <  1:1095757/235‑1 (MQ=255)                                                                                                                                                                               gCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGTAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGt                                                           <  1:115473/222‑1 (MQ=255)                                                                                                                                                                                cGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCctgct                                                                                                                                            <  2:704437/140‑1 (MQ=255)                                                                                                                                                                                cGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATAc                                             <  1:642832/235‑1 (MQ=255)                                                                                                                                                                                           ggggTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCa                                    >  2:1359481/1‑234 (MQ=255)                                                                                                                                                                                                      aTACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAgc                          <  2:644079/233‑1 (MQ=255)                                                                                                                                                                                                         cTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACAGCCGAGGCCAGGCGAATTTCACCCTgg                                                                                                                                                                  >  2:680654/1‑94 (MQ=255)                                                                                                                                                                                                          tGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCa                                    <  2:563889/219‑1 (MQ=255)                                                                                                                                                                                                            gTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGGGCGGCCAGCTGGTCTTCCGGACGTACATCGGc                                                                      >  1:369167/1‑183 (MQ=255)                                                                                                                                                                                                              aaCCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCCCCCTGGGGCCCGAACTCACCGGCCTGCTGGcc                                                                                                                                        >  2:279161/1‑115 (MQ=255)                                                                                                                                                                                                              aaCCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGc                                                                                                                                         <  1:70620/114‑1 (MQ=255)                                                                                                                                                                                                              aaCCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGc                                                                                                                                         >  2:70620/1‑114 (MQ=255)                                                                                                                                                                                                              aaCCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTg                                                                                                                                    <  1:288759/119‑1 (MQ=255)                                                                                                                                                                                                              aaCCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTg                                                                                                                                    >  2:288757/1‑119 (MQ=255)                                                                                                                                                                                                              aaCCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTcgcg                >  1:775380/1‑235 (MQ=255)                                                                                                                                                                                                                    cgccgcTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGt         <  1:1079502/236‑1 (MQ=255)                                                                                                                                                                                                                         ctgccTCCATTGGAAACCGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCTCCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAg                                                                  <  1:304657‑M2/169‑1 (MQ=255)                                                                                                                                                                                                                         ctgccACCATTGGAAAGCGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGt                                                           <  2:596124‑M2/176‑1 (MQ=255)                                                                                                                                                                                                                            ccACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCAt  <  1:454545‑M2/233‑1 (MQ=255)                                                                                                                                                                                                                              |                                                                                                                                                                                                                                         GGCCAACAGCATTCTCGGCCAGGATGTAGATACCCTTGAGCTGCGCCAGGGCATAGCCTAGCGGGGGAATGTCGCCCTGGCTTTCGGGCAGTGCCGTCGCAGGCGCAGCACCTGTTTCCAGCGGCTTATAGAACTCGCGATACACCGCCTGTGCCTCTGCGGCCGGCAGCGGCTGCGA‑GGGACGTGGGGTGTATTGATACTGGTAACCGGCGCCGCTGCCACCATTGGAAAACGACTGTTGCGGGGCTCGAGGCTGTTCAAGCACCGGCGAGGCCAGGCGCATTTCACCCTGGGGCCCGAACTCACCGGCCTGCTGGCCGGTGGGGCGAACCAGCTCAGGTACGGCAGCAGGTGCGGCCAGCTGGTCTTCCGGACGTACATCGGCCAAGGCACGGTGCAAGGTGCCATACAGGAAGTCATGCACCGAGCGCCCTTCGCGGAACCGTACTTCAT  >  AE015451/5566102‑5566554

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.