New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	452136 =	70 (1.020)	5 (0.080)	5/324	NT	7.2%	coding (54/1281 nt)	aruC	Acetylornithine aminotransferase 2
	?	AE015451	452163 =	61 (0.930)					coding (81/1281 nt)	aruC	Acetylornithine aminotransferase 2

CTGAGTGAAGTCCAGGTAGGCATGCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/452283‑452136 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcacgcGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGTTGGGCAACCAGGCTCAGGCGTTGATCA  >  AE015451/452163‑452362                                                                                                                                                                                                                                                                                                                                                              CTGAGTGAAGTCCAGGTAGGCATGCCCTTCGTTGTCCCACAACCACGCGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGT                                                                                                                                                    <  1:191263/202‑1                                           CCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACG                                                                                                                                                                                                           >  2:89844/1‑105                                                                                      GTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCGTCTGAGCAATCGCCT                                                                                                                                                                                          <  2:1037736/79‑1                                                                                           GGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATG                                                                                                     <  1:739933/159‑1                                                                                           GGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATG                                                                                                     >  2:739930/1‑159                                                                                                                             TGCGGCACGAGCACCGGCGCGCGCGTCTGGGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGG                                                                                                                                                     <  1:1210445/77‑1                                                                                                                                               GCACGCGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCA                                               >  1:793924/1‑161                                                                                                                                                    CGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGTTGGGCAACCAGGCTCAGGCGTTGATCA  <  1:515949/201‑1                                                                                                                                                                                                                                                                                                                                                              CTGAGTGAAGTCCAGGTAGGCATGCCCTTCGTTGTCCCACAACCACGAGCCCTGGCCACGCACGAATACCTGCGCTGCACGTTCGGTGCCGGGCATCAGGCGCTCAGGCGACTGCTCAGACGCGTGCGGCACGATCACCGGCGCACGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/452283‑452136 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcacgcGTCTGAGCAGTCGCCTGAGCGCCTGATGCCCGGCACCGAACGTGCAGCGCAGGTATTCGTGCGTGGCCAGGGCTCGTGGTTGTGGGACAACGAAGGGCATGCCTACCTGGACTTCACTCAGGGCGGTGCGGTCAACAGCTTGGGCCACAGCCCCAGCGTGCTGGTCAAAGCGTTGGGCAACCAGGCTCAGGCGTTGATCA  >  AE015451/452163‑452362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.