| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 570396 = | 86 (1.250) | 7 (0.110) | 6/318 | NT | 8.6% | coding (772/1395 nt) | yajR | transporter of an unknown substrate |
| ? | AE015451 | 570494 = | 68 (1.050) | coding (870/1395 nt) | yajR | transporter of an unknown substrate | |||||
CGCGCAAACCGTCAGCCCACTCCCAGAAGTATATCTCCGTCAGCAGCAGGACACTGACCGCGCCGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/570546‑570396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCA > AE015451/570494‑570653 CGCGCAAACCGTCAGCCCACTCCCAGAAGTATATCTCCGTCAGCAGCAGGACACTGACCGCGCCGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGG < 2:1263055/182‑1CGCGCAAACCGTCAGCCCACTCCCAGAAGTATATCTCCGTCAGCAGAAGGACACTGACCGCGCCGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGag > 2:838478/1‑142 TATCCCCGTCAGCAGCAGGACACTGACCGCGCCGGCCAACACACGTTTCCTCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTT < 1:701108/167‑1 CAGCAGCAGGACACTGACCGCGCCGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTT < 2:430765/138‑1 AGCAGCAGGACACTGACCGCGCCGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTG < 2:1194010/175‑1 CCGGCCAACACACGTTTAATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGC < 2:83258/83‑1 CGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAGTGTCCTGCTACTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTT < 1:961204/169‑1 CGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAGTGTCCTGCTACTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTT > 2:961201/1‑169 GCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGACCAGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTG < 2:1129706/119‑1 CGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCT < 2:741697/127‑1 GGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCA > 1:24246/1‑166 CGCGCAAACCGTCAGCCCACTCCCAGAAGTATATCTCCGTCAGCAGCAGGACACTGACCGCGCCGGCCAACACACGTTTCATCTTGCGCTTTTTTTCGCCATAGATGATGAACGGGACCATTGCAAAAAATGAGATGAACAGCGCGGTCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/570546‑570396‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCA > AE015451/570494‑570653 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |