New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 570396 =86 (1.250)7 (0.110) 6/318 NT 8.6% coding (772/1395 nt) yajR transporter of an unknown substrate
?AE015451 570494 = 68 (1.050)coding (870/1395 nt) yajR transporter of an unknown substrate

CATCCGGACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGG  >  AE015451/570264‑570716
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                              
cATCCGGACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTcc                                                                                                                                                                                                                            >  1:741700/1‑235 (MQ=255)
     ggACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgc                                                                                                                                                                                                                      <  1:1112550/236‑1 (MQ=255)
     ggACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgc                                                                                                                                                                                                                         >  2:887161/1‑233 (MQ=255)
     ggACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctg                                                                                                                                                                                                                          >  2:936104/1‑232 (MQ=255)
      gACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgc                                                                                                                                                                                                                      <  1:1049846/235‑1 (MQ=255)
      gACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgc                                                                                                                                                                                                                      <  1:1213736/235‑1 (MQ=255)
      gACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCACGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctg                                                                                                                                                                                                                       >  2:1195739/1‑234 (MQ=255)
                gcCTGGACGTCAGCATTTTCCTCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGCGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGat                                                                                                                                                                                                            <  1:470375/235‑1 (MQ=255)
                                 ttCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGgaga                                                                                                                                                                                                             <  1:972426/217‑1 (MQ=255)
                                   cATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCt                                                                                                                                                                                         >  1:626481/1‑235 (MQ=255)
                                          cACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctg                                                                                                                                                                                                                          <  2:568365/195‑1 (MQ=255)
                                             gCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTgct                                                                                                                                                                              >  2:1173977/1‑235 (MQ=255)
                                                      aTGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgct                                                                                                                                                                                                                        <  2:1120962/185‑1 (MQ=255)
                                                         gCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGAt                                                                                                                                                                  <  1:596447/236‑1 (MQ=255)
                                                              cTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTg                                                                                                                                                                >  2:1079136/1‑233 (MQ=255)
                                                                tCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCAcc                                                                                                                                                           <  1:855513/236‑1 (MQ=255)
                                                                tCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCAcc                                                                                                                                                           <  1:887164/236‑1 (MQ=255)
                                                                tCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCAcc                                                                                                                                                           <  1:1081745/236‑1 (MQ=255)
                                                                tCGTGGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTTCCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGgaga                                                                                                                                                                                                             <  2:328468/186‑1 (MQ=255)
                                                                 cGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGa                                                                                                                                                                   >  2:872814/1‑227 (MQ=255)
                                                                 cGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCAcc                                                                                                                                                           <  1:1071101/235‑1 (MQ=255)
                                                                   caatcaccagtccgcgcaaaccgtcagcccactcccagaagtatatctccgtcagcagcaggacaCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgct                                                                                                                                                                                                                     <  2:1194010‑M1/110‑1 (MQ=255)
                                                                               cgcgcaaaccgtcagcccactcccagaagtatatctccgtcagcagcaggacactgaccgcgccggccaacacacgtttcatcttgcgctttttttcgccatagatgatgaacgggaccattgcaaaaaatgagatgaacagcgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTgg                                                                                                                                                                                                  <  2:1263055‑M2/31‑1 (MQ=255)
                                                                                     tcgtcgAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCAtt                                                                                                                                       >  1:468794/1‑235 (MQ=255)
                                                                                     tcgtcgAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCAtt                                                                                                                                       <  1:936107/235‑1 (MQ=255)
                                                                                     aaccgtcagcccactcccagaagtatatctccgtcagcagcaggacaCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGAGGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGGGata                                                                                                                                                                                                           <  1:701108‑M1/120‑1 (MQ=255)
                                                                                      cgtcgAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTc                                                                                                                                      <  1:6615/235‑1 (MQ=255)
                                                                                          gAGCGGGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATGGCACCGTGGTATTCTTTACCGCAt                                                                                                                                        <  1:1047137/228‑1 (MQ=255)
                                                                                              gTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGgaga                                                                                                                                                                                                             >  1:990948/1‑156 (MQ=255)
                                                                                              gTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGgaga                                                                                                                                                                                                             <  2:990945/156‑1 (MQ=255)
                                                                                                gggggcCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTg                                                                                                                                                                <  2:889455/196‑1 (MQ=255)
                                                                                                   ggcCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACGGGTGATTGGCACCGTGGTATTCTTTACCGCAt                                                                                                                                        >  2:6615/1‑220 (MQ=255)
                                                                                                     ccagaagtatatctccgtcagcagcaggacaCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGcgcg                                                                                                                                                                            <  2:1263055‑M1/151‑1 (MQ=255)
                                                                                                     ccTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCt                                                                                                                       >  1:1253805/1‑235 (MQ=255)
                                                                                                        gCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgc                                                                                                                                                                                                                      <  1:569834/137‑1 (MQ=255)
                                                                                                         cccAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGc                                                                                                                   <  1:893314/235‑1 (MQ=255)
                                                                                                         aagtatatctccgtcagcagcaggacaCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgctg                                                                                                                                                                                                                    <  2:430765‑M1/111‑1 (MQ=255)
                                                                                                              tatccccgtcagcagcaggacactgaccgcgccggccaacacacgtttcctcttgcgctttttttcgccatagatgatgaacgggaccattgcaaaaaatgagatgaacagcgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGtt                                                                                                                                                                                  <  1:701108‑M2/47‑1 (MQ=255)
                                                                                                              ggAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTc                                                                                                                     <  1:483990/228‑1 (MQ=255)
                                                                                                               gAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGcgcg                                                                                                                                                                            <  1:1130244/172‑1 (MQ=255)
                                                                                                                 gcagcaTTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTGGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCctgctgctg                                                                                                                                                                                                                    <  2:1280754/130‑1 (MQ=255)
                                                                                                                      aTTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCCAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTc                                                                                                                                                                                                                             >  1:99871/1‑116 (MQ=255)
                                                                                                                       ttGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCt                                                                                                              <  1:750852/226‑1 (MQ=255)
                                                                                                                       cagcagcaggacactgaccgcgccggccaacacacgtttcatcttgcgctttttttcgccatagatgatgaacgggaccattgcaaaaaatgagatgaacagcgcggtcagTGTCCTGCTGCTGACGGAGATATACtt                                                                                                                                                                                                      <  2:430765‑M2/27‑1 (MQ=255)
                                                                                                                        tggtggGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGcgcg                                                                                                                                                                            <  2:177101/163‑1 (MQ=255)
                                                                                                                        tggtggGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTc                                                                                                                     <  2:468791/218‑1 (MQ=255)
                                                                                                                        tggtggGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTctct                                                                                                         <  1:620276/230‑1 (MQ=255)
                                                                                                                        agcagcaggacactgaccgcgccggccaacacacgtttcatcttgcgctttttttcgccatagatgatgaacgggaccattgcaaaaaatgagatgaacagcgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTg                                                                                                                                                                <  2:1194010‑M2/65‑1 (MQ=255)
                                                                                                                             ggtgTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTgcgc                                                                                                                                                                             >  2:977186/1‑157 (MQ=255)
                                                                                                                             ggtgTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTg                                                                                                                                                                                >  2:733686/1‑154 (MQ=255)
                                                                                                                             ggtgTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTg                                                                                                                                                                                <  1:733689/154‑1 (MQ=255)
                                                                                                                             ggtgTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAgg                                                                                              >  1:70/1‑236 (MQ=255)
                                                                                                                                   ccTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCtt                                                                                                                                                <  2:348519/180‑1 (MQ=255)
                                                                                                                                           ctCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTTCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGcgcg                                                                                                                                                                            >  2:838478‑M1/3‑144 (MQ=255)
                                                                                                                                              tGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGGGGCTTCGCTGCCTtc                                                                                                            >  1:236239/1‑205 (MQ=255)
                                                                                                                                              tGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGc                                                                             >  1:401966/1‑236 (MQ=255)
                                                                                                                                              tGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGc                                                                             >  1:1236228/1‑236 (MQ=255)
                                                                                                                                              tGTTCATCTCAGTTTTTGCAGTGGTCCCGTTCATCAGCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGttt                                                                                                                                                                                 <  2:90737/136‑1 (MQ=255)
                                                                                                                                              cggccaacacacgtttcatcttgcgctttttttcgccatagatgatgaacgggaccattgcaaaaaatgagatgaacagcgcggtcagTGTCCTGCTACTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCtt                                                                                                                                                >  2:961201‑M2/89‑169 (MQ=255)
                                                                                                                                              cggccaacacacgtttcatcttgcgctttttttcgccatagatgatgaacgggaccattgcaaaaaatgagatgaacagcgcggtcagTGTCCTGCTACTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCtt                                                                                                                                                <  1:961204‑M2/81‑1 (MQ=255)
                                                                                                                                                           gtttGCAATGGTCCCGTTCATCATCTATGGCGTAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGc                                                                  <  2:1214429/233‑1 (MQ=255)
                                                                                                                                                            tttGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAggg                                                                        <  1:120766/227‑1 (MQ=255)
                                                                                                                                                                  aTGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGgt                                                         <  1:486379/236‑1 (MQ=255)
                                                                                                                                                                      tCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGt                                                                                                                                                         <  2:1047359/136‑1 (MQ=255)
                                                                                                                                                                           ttCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTccac                                                >  1:564187/1‑236 (MQ=255)
                                                                                                                                                                            tcatcaTCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTccacc                                               <  1:1079139/236‑1 (MQ=255)
                                                                                                                                                                                gccatagatgatgaacgggaccattgcaaaaaatgagatgaccagcgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTg                                                                                                                                                                <  2:1129706‑M2/65‑1 (MQ=255)
                                                                                                                                                                                   cTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGTGTGGGCTGACGGGTTGCGCGGACTGGTGCTTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTc                                                                                                                     >  1:321292/1‑159 (MQ=255)
                                                                                                                                                                                   cTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGGGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTCCCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGt                                                                                                      >  2:581261/1‑174 (MQ=255)
                                                                                                                                                                                   cTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCAccagcc                                           >  2:629117/1‑233 (MQ=255)
                                                                                                                                                                                       ggCGAAAAAAAGCGCACGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGc                                                                                                                                          <  2:475758/134‑1 (MQ=255)
                                                                                                                                                                                       ggCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGt                                                                                                                                                      >  2:405709/1‑122 (MQ=255)
                                                                                                                                                                                          gAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCg                                  >  1:1178412/1‑235 (MQ=255)
                                                                                                                                                                                           aaaaaaaGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATAGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCGTCGCTACCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGGAATGGGGGTGTATTCCACCAGCCAGTTCCTCg                                  <  2:1208107/234‑1 (MQ=255)
                                                                                                                                                                                                aaGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGgaga                                                                                                                                                                                                             >  2:843083/1‑58 (MQ=255)
                                                                                                                                                                                                aaGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGgaga                                                                                                                                                                                                             <  1:843086/58‑1 (MQ=255)
                                                                                                                                                                                                       aGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTa                       <  2:401963/233‑1 (MQ=255)
                                                                                                                                                                                                                gtgtgtTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGt                                                                                <  1:1065849/167‑1 (MQ=255)
                                                                                                                                                                                                                gtgtgtTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAg                                                                          <  2:70/173‑1 (MQ=255)
                                                                                                                                                                                                                    gtTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCaa                                                                           <  1:647217/168‑1 (MQ=255)
                                                                                                                                                                                                                      tGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGc                                                                  >  1:602987/1‑175 (MQ=255)
                                                                                                                                                                                                                      tGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCg                                  >  2:577220/1‑207 (MQ=255)
                                                                                                                                                                                                                          cGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCggctgg  >  1:1262537/1‑235 (MQ=255)
                                                                                                                                                                                                                             cgcggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTtct                                                                                                           <  2:741697‑M2/118‑1 (MQ=255)
                                                                                                                                                                                                                                ggtcagTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCa                                                                 >  1:24246‑M2/7‑166 (MQ=255)
                                                                                                                                                                                                                                      tgtCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGGGGCTTCGc                                                                                                                   <  2:340233/110‑1 (MQ=255)
                                                                                                                                                                                                                                      |                                                                                                                                                                                                                              
CATCCGGACCTTCTGCGCCTGGACGTCAGCATTTTCATCCTGCACGCCGTCCTCATGGCCAGCTTCGTTGCGCTGCCGCTGGCGTTCGTCGAGCGTGGCGGCCTGCCCAAGGAGCAGCATTGGTGGGTGTACCTGACCGCGCTGTTCATCTCATTTTTTGCAATGGTCCCGTTCATCATCTATGGCGAAAAAAAGCGCAAGATGAAACGTGTGTTGGCCGGCGCGGTCAGTGTCCTGCTGCTGACGGAGATATACTTCTGGGAGTGGGCTGACGGTTTGCGCGGACTGGTGATTGGCACCGTGGTATTCTTTACCGCATTCAACCTGCTGGAGGCTTCGCTGCCTTCTCTGGTGAGCAAGGTGTCGCCTGCCGGTGGCAAGGGGACGGCAATGGGGGTGTATTCCACCAGCCAGTTCCTCGGTGCAGCGTTAGGCGGGATTCTTGGCGGCTGG  >  AE015451/570264‑570716

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.