New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	741491 =	NA (NA)	11 (0.170)	8/324	NT	NA	intergenic (+91/‑409)	PP_t12/PP_0635	tRNA‑Thr/Group II intron‑encoding maturase
	?	AE015451	741509 =	NA (NA)					intergenic (+109/‑391)	PP_t12/PP_0635	tRNA‑Thr/Group II intron‑encoding maturase

CAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/741729‑741491 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaacCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATCCG  >  AE015451/741509‑741742                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGC                                                                                                                                                                                                                                                 <  1:471604/234‑1       TCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAAC                                                                                                                                                                                                                                            <  2:502000/233‑1        CCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGC                                                                                                                                                                                                                                                 <  2:778658/227‑1            GCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCt                                                                                                                                                                                                                                                >  1:965186/1‑223              AAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                <  1:709694/222‑1              AAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                >  2:709691/1‑222                  ATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGC                                                                                                                                                                                                                                               <  2:659614/219‑1                           TGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCACTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGC                                                                                                                                                                                                                                                 >  2:738093/1‑208                                 TTTGTGCCCCCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGC                                                                                                                                                                                                                                                 <  1:383277/202‑1                                    GTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGC                                                                                                                                                                                                                                                 <  1:778835/199‑1                                                CCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                <  2:651171/188‑1                                                CCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                <  2:1060656/188‑1                                                        GCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTAC                                                                                                                                                                                         <  1:958407/235‑1                                                                      CTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                <  2:1066966/166‑1                                                                          CTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGTGGTGCGCTTACGCGCAc                                                                                                                                                                                                                                             >  1:120065/1‑164                                                                          CTGTTCGTCAGGCCAGCATTTCGCCTCGCGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTCCCGTGTGTGTCGATGACTTTCACCTCCAAGTCACCCACTTGGCCACCGCAACCAGGCCGGTTGCGCTGACG                                                                                                                                                                                                                                                  >  2:421499/1‑160                                                                           TGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCACAAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCATACGCGCAACCCGCTTGGTT                                                                                                                                                                                                                                  <  2:528642/175‑1                                                                                            TTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGCCACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCCCTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACCCGCTTGGTT                                                                                                                                                                                                                                  <  1:340155/158‑1                                                                                                           CCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGCGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCATACGCGCAACCCGCTTGGTT                                                                                                                                                                                                                                  <  2:543933/143‑1                                                                                                                        GGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGC                                                                                                                                                                                                                                               <  1:992937/117‑1                                                                                                                        GGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGC                                                                                                                                                                                                                                               >  2:992934/1‑117                                                                                                                         GTCACCCTCGACACCCTTGCCTCCGGCTAACTCTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACCCGCTTGGTTGTG                                                                                                                                                                                                                               <  2:891254/132‑1                                                                                                                          TCACCCGCGGCACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                <  2:1279440/114‑1                                                                                                                          TCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACG                                                                                                                                                                                                                                                  >  2:666581/1‑112                                                                                                                                                                   cctGGTGTGTAGAGGCCTTTCCCCTCCACGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCATACGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTA                                                                                                                                                                  <  1:446268/148‑1                                                                                                                                                                    CGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                >  2:284003/1‑72                                                                                                                                                                    CGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCG                                                                                                                                                                                                                                                <  1:284004/72‑1                                                                                                                                                                      GGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAG                                                                                                                                                                 <  1:1068078/149‑1                                                                                                                                                                                   CTTTCCCCTCCAAGTCACCCACTTGGCCACCACAACCACGCGGGTTGCGCTTACGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAG                                                                                                                                                                             <  2:517980/124‑1                                                                                                                                                                                                            GCCCCCACAGCCATGCGGGTTCCGCTTACGCGCAGCCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACC                                                                                                                                      <  1:125799/138‑1                                                                                                                                                                                                             cccCCACACCCAAGCGGGTTGCGCCTTCGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGG                                                                                                                                                    <  1:1113015/120‑1                                                                                                                                                                                                                 CACAACCAAGCGGGTTGCGCTTACG                                                                                                                                                                                                                                                  >  2:1052120/1‑25                                                                                                                                                                                                                        agGCGGGTGGCGCCTACGCGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGG                                                                                                                                                                                                          <  2:84974/56‑1                                                                                                                                                                                                                                         GCGCAACCCGCTTGGTAGTGGTGGCCAAGTGGGTGACTTGGAGGAGAAAGTCCTCTACACACCCGGCAAGGCGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACC                                                                                                                                      <  2:580491/109‑1                                                                                                                                                                                                                                          CGCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTAGTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGCATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAG                                      <  2:699861/204‑1                                                                                                                                                                                                                                           GCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCTAGGGGAAGGGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACG                                                                                             >  2:309073/1‑148                                                                                                                                                                                                                                           GCAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGC                                                                      >  2:840130/1‑171                                                                                                                                                                                                                                            CAACCCGCTTGGTTGTGGTGGCGAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAGGTGGTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGC                                                                      <  2:382157/170‑1                                                                                                                                                                                                                                            CAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  1:617402/236‑1                                                                                                                                                                                                                                            CAACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCAGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  1:1175922/236‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACa                       >  1:1254253/1‑215                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  1:680035/235‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  1:1135451/235‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  2:529502/235‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  2:619650/235‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATC    <  1:403960/235‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGG                                                                                                                                                                            >  2:403264/1‑67                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTG                                                                                                                                                                                                     <  1:217809/42‑1                                                                                                                                                                                                                                             AACCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTG                                                                                                                                                                                                     >  2:217809/1‑42                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCGAGTGGGTGACTT                                                                                                                                                                                                            <  2:174601/33‑1                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCg                                                                                                 >  2:835732/1‑139                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATCCG  >  1:919091/1‑235                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATCCG  >  1:905373/1‑235                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAA                    >  1:375401/1‑217                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAG                                      <  1:948604/199‑1                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAG                                      >  2:948601/1‑199                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGGGGCACAAATCGCCAAAGCCCAAT                                >  1:193103/1‑205                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGC                                                                      >  1:278823/1‑167                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCG                                                                        <  1:149652/165‑1                                                                                                                                                                                                                                               CCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCC                                                                                                  <  2:353984/139‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGCGTTCCGTGCAAGTATTGGGCTTTGGCGATTTGTGCCACCTCACCCCGCTGTGCCGCCTCTATCCGCTTCCTGTTCGTCAGGCCAGCATTTTGCCTCGGGCTTCCTTCAGATTCGCGGTCACCCGCGACACCCTTGCCTCCGGCTAACACTTCCCCTTGCCGGGTGTGTAGAGGACTTTCACCTCCAAGTCACCCACTTGGCCACCACAACCAAGCGGGTTGCGCTTACGCGCAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/741729‑741491 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaacCCGCTTGGTTGTGGTGGCCAAGTGGGTGACTTGGAGGTGAAAGTCCTCTACACACCCGGCAAGGGGAAGTGTTAGCCGGAGGCAAGGGTGTCGCGGGTGACCGCGAATCTGAAGGAAGCCCGAGGCAAAATGCTGGCCTGACGAACAGGAAGCGGATAGAGGCGGCACAGCGGGGTGAGGTGGCACAAATCGCCAAAGCCCAATACTTGCACGGAACGCTGTGACGTAGATCCG  >  AE015451/741509‑741742

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.