| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2147295 = | 44 (0.640) | 4 (0.060) | 4/320 | NT | 8.7% | coding (3225/3276 nt) | rne | ribonuclease E |
| ? | AE015451 | 2147314 = | 42 (0.650) | coding (3206/3276 nt) | rne | ribonuclease E | |||||
AGGCCCCGGCCGTGGTCGAAGTCGCTCCGGTTGCCGCACAGCCTGCCCCGGTTGTCGAAGCCCAGCCAGAAGTGGTGGCCGAGCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2147536‑2147295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcttccTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGACCACGGCCGGGGCCTGTTCGATTTC > AE015451/2147314‑2147546 AGGCCCCGGCCGTGGTCGAAGTCGCTCCGGTTGCCGCACAGCCTGCCCCGGTTGTCGAAGCCCAGCCAGAAGTGGTGGCCGAGCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGC < 1:1100685/235‑1 CGGTTGCCGCACAGCCTGCCCCGGTTGTCGAAGCCCAGCCAGAAGTGGTGGCCGAGCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCCTGTGCCGCTTTGGCAGCAG > 1:391212/1‑234 GGTTGCCGCACAGCCTGCCCCGGTTGTCGAAGCCCAGCCAGAAGTGGTGGCCGAGCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCCT > 1:1261375/1‑215 CCGGTGGTCGAAGCCCAGCCAGAAGTGGTGGCCGAGCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGC < 2:444734/188‑1 GCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCG < 2:391209/201‑1 GGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACG < 2:1261372/192‑1 ACCCACGTGAAGGGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTT < 2:732337/154‑1 GCTTCCTGTGCCGCTTTGGCCGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGACCACGGCCGG < 1:290868/224‑1 GCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGC > 2:758767/1‑194 GCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGGTCGAC > 2:267696/1‑110 CTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGGTCGACCACTTCAGGGGCAAGGTCG > 1:312097/1‑128 aCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGACCACGGCCGGGGCCTGTTCGATTTC < 2:741998/235‑1 CCTGTGCCGCTTTGGCAGCAGCCTCGGCCGCCCGCTTGCGGCGACGCACTGCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGA > 2:1104614/1‑126 AGGCCCCGGCCGTGGTCGAAGTCGCTCCGGTTGCCGCACAGCCTGCCCCGGTTGTCGAAGCCCAGCCAGAAGTGGTGGCCGAGCCTGCACCTGCGGTGGTCGAACCTGCACCTGCAGTGGTCGAACCTGCCACTGTCATGCTGGCCAACGGCCGTGCACCGAACGACCCACGTGAAGTGCGTCGCCGCAAGCGGGAGGCCGAGGCTGCTGCCAAAGCGGCACAGGAAGCTGCTGCAGCTTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2147536‑2147295‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcttccTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGACCACGGCCGGGGCCTGTTCGATTTC > AE015451/2147314‑2147546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |