New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	2147295 =	44 (0.640)	4 (0.060)	4/320	NT	8.7%	coding (3225/3276 nt)	rne	ribonuclease E
	?	AE015451	2147314 =	42 (0.650)					coding (3206/3276 nt)	rne	ribonuclease E

AAGATTCAGGCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGA  >  AE015451/2147062‑2147521                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                   gaaatcgaacaggccccggccgtggtcgaagtcgctccggttgccgcacagcctgccccggttgtcgaagcccagccagaagtggtggccgagcctgcacctgcggtggtcgaacctgcacctgcagtggtcgaacctgccactgtcatgctggccaacggccgtgcaccgaacgacccacgtgaagtgcgtcgccgcaagcgggaggccgaggctgctgccaaagcggcacaggt                                                                                                                                                                                                                                  <  2:741998‑M1/3‑2 (MQ=255)                ccggccgtggtcgaagtcgctccggttgccgcacagcctgccccggttgtcgaagcccagccagaagtggtggccgagcctgcacctgcggtggtcgaacctgcacctgcagtggtcgaacctgccactgtcatgctggccaacggccgtgcaccgaacgacccacgtgaagtgcgtcgccgcaagcgggaggccgaggctgcggccaaagcggcacaGGAAGc                                                                                                                                                                                                                               <  1:290868‑M1/6‑1 (MQ=255)                atCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgca                                                                                                                                                                                                                           >  1:1047855/1‑228 (MQ=255)                          ggTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCt                                                                                                                                                                                                         >  1:742001/1‑236 (MQ=255)                                        cTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCcgcagc                                                                                                                                                                                              >  2:1241740/1‑233 (MQ=255)                                         tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCGCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCCTTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCAACGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTc                                                                                                                                                                                           >  1:702800/1‑235 (MQ=255)                                         tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCCGCTTCCTGTGCCGCttt                                                                                                                                                                                                       >  1:1265101/1‑223 (MQ=255)                                         tGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTcc                                                                                                                                                                                                                  >  1:471535/1‑212 (MQ=255)                                              gcacagcctgccccggttgtcgaagcccagccagaagtggtggccgagcctgcacctgcggtggtcgaacctgcacctgcagtggtcgaacctgccactgtcatgctggccaacggccgtgcaccgaacgacccacgtgaagtgcgtcgccgcaagcgggaggccgaggctgctgccaaagcggcacaGGAAGc                                                                                                                                                                                                                               >  2:758767‑M1/189‑194 (MQ=255)                                                        aTCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg                                                                                                                                                                           <  1:856435/236‑1 (MQ=255)                                                        aTCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg                                                                                                                                                                           <  2:869403/236‑1 (MQ=255)                                                                       ccGGCTGTGAACCCCCGTAGGGGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcggcg                                                                                                                                                                         <  2:1011197/223‑1 (MQ=255)                                                                                aaCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTg                                                                                                                                                                                                      <  2:1275100/185‑1 (MQ=255)                                                                                   ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGGTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCCGCAGCTTCCTGTGCCg                                                                                                                                                                                                           >  2:542008/1‑177 (MQ=255)                                                                                    cccGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcg                                                                                                                                                                            <  1:550181/207‑1 (MQ=255)                                                                                        tAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCAc                                                                                                                                            <  1:976604/235‑1 (MQ=255)                                                                                         aGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCtgtg                                                                                                                                                                                                              >  1:37775/1‑168 (MQ=255)                                                                                             gCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACGGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGt                                                                                                                                      >  1:668119/1‑236 (MQ=255)                                                                                              cGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGTCCg                                                                                                                                       <  2:634504/234‑1 (MQ=255)                                                                                              cGGGGTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg                                                                                                                                                                           <  2:814880/198‑1 (MQ=255)                                                                                                ggTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTgca                                                                                                                                                                                                                           >  2:786704/1‑148 (MQ=255)                                                                                                            aaGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg                                                                                                                                                                           <  2:1047852/184‑1 (MQ=255)                                                                                                              tcgaacctgcacctgcagtggtcgaacctgccactgtcatgctggccaacggccgtgcaccgaacgacccacgtgcagtgcgtcgccgcaagcgggcggccgaggctgctgccaaagcggcacagg                                                                                                                                                                                                                                   >  2:1104614‑M1/125‑126 (MQ=255)                                                                                                               cgaccttgcccctgaagtggtcgaccctgccactgtcatgctggccaacggccgtgcaccgaacgacccacgtgaagtgcgtcgccgcaagcgggaggccgaggctgctgccaaagcggcacaGGAAg                                                                                                                                                                                                                                >  1:312097‑M1/124‑128 (MQ=255)                                                                                                                      tCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTcccagg                                                                                                                                                                                                              <  2:1275011/139‑5 (MQ=255)                                                                                                                             aaCCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTc                                                                                                             <  2:507417/229‑1 (MQ=255)                                                                                                                               ccAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTc                                                                                                             <  2:624803/227‑1 (MQ=255)                                                                                                                                  gtcgaccctgccactgtcatgctggccaacggccgtgcaccgaacgacccacgtgaagtgcgtcgccgcaagcgggaggccgaggctgctgccaaagcggcacaGGAAGc                                                                                                                                                                                                                               >  2:267696‑M1/105‑110 (MQ=255)                                                                                                                                       cgCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCGATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTgcgg                                                                                                                                                                           <  2:380698/156‑1 (MQ=255)                                                                                                                                                aGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACtgcaggtgcag                                                                                            >  1:51898/1‑227 (MQ=255)                                                                                                                                                  tttGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGaccac                                                                                  <  1:1073947/235‑1 (MQ=255)                                                                                                                                                  tttGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGaccac                                                                                  <  1:562316/235‑1 (MQ=255)                                                                                                                                                            ctgggCTTTTGCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGc                                                                                                                                                                                 <  2:1199331/128‑1 (MQ=255)                                                                                                                                                             aacggccgtgcaccgaacgacccacgtgaagtgcgtcgccgcaagcgggaggccgaggctgctgccaaagcggcacaGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCCCTTCACGTGGGt                                                                                                                                                        <  2:732337‑M1/77‑1 (MQ=255)                                                                                                                                                                   ttttCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCCTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTc                                                                                                             <  1:344059/191‑1 (MQ=255)                                                                                                                                                                        attcaGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCCGCAt                                                                                                                            >  2:58395/1‑171 (MQ=255)                                                                                                                                                                              cTTTGGCTATCAGCCGTGATGAGGTGTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGc                                                                                                                                         <  2:937620/152‑1 (MQ=255)                                                                                                                                                                                 gggCTATCAGCCGTGAGGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGaccac                                                                                  <  2:929385/203‑1 (MQ=255)                                                                                                                                                                                           ccGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGa                                         >  1:495441/1‑235 (MQ=255)                                                                                                                                                                                            cGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAg                                                                       <  1:456102/204‑1 (MQ=255)                                                                                                                                                                                              cgtcgccgcaagcgggaggccgaggctgctgccaaagcggcacaGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGaccacc                                                                                 <  2:1261372‑M1/148‑1 (MQ=255)                                                                                                                                                                                                 cgccgcaagcgggaggccgaggctgctgccaaagcggcacaGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGc                                                                     <  2:391209‑M1/160‑1 (MQ=255)                                                                                                                                                                                                      tttGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGc                                                                <  1:119691/201‑1 (MQ=255)                                                                                                                                                                                                             tCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCAc                                                                                                       >  2:802013/1‑155 (MQ=255)                                                                                                                                                                                                               aTCGGCGGCTGCCAGGGCTGGTTCCTGGGAAGCTGCGGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACtgcag                                                                                                  <  2:341374/158‑1 (MQ=255)                                                                                                                                                                                                                  ggcggcTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCg                                                                                                                                       <  2:169051/118‑1 (MQ=255)                                                                                                                                                                                                                  ggcggcTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCg                                                                                                                                       >  1:169051/1‑118 (MQ=255)                                                                                                                                                                                                                  ggcggcTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCa                                                                                                        >  1:117602/1‑149 (MQ=255)                                                                                                                                                                                                                  ggcggcTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCg                                                                  >  1:830907/1‑187 (MQ=255)                                                                                                                                                                                                                  ggcggcTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCg                     >  2:505874/1‑232 (MQ=255)                                                                                                                                                                                                                       ctgctgccaaagcggcacaGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCg              >  1:391212‑M1/20‑234 (MQ=255)                                                                                                                                                                                                                       cTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGGGCGGCAACCGGa            >  1:518621/1‑236 (MQ=255)                                                                                                                                                                                                                            aGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCGGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTc                                                                                                                                                       <  2:812499/92‑1 (MQ=255)                                                                                                                                                                                                                                  ggTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGa  <  1:580155/235‑1 (MQ=255)                                                                                                                                                                                                                                      ccTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCa                              <  1:985733/203‑1 (MQ=255)                                                                                                                                                                                                                                      ccTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCa                              >  2:985730/1‑203 (MQ=255)                                                                                                                                                                                                                                      ccTGGGAAGCTGAAGCAGCTTCCTGTGCCGCtt                                                                                                                                                                                                        >  2:314618/1‑33 (MQ=255)                                                                                                                                                                                                                                         aGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAAcc               >  1:1261375‑M1/2‑215 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                   AAGATTCAGGCGGATATCTTCGAGCGGTTTGGGGTTGAGCTGGAGATGGAGCCTAATCTTTACTGATTTGCCGGCTGTGAACCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCCGTCAGGCAAACCAAAAAAAGCCCCGCCAGTTTGCACTGGCGGGGCTTTTTCATTCAGCTTTGGCTATCAGCCGTGATGAGGTTTGTGCTCATCGGCGGCTTCCAGGGCTGGTTCCTGGGAAGCTGCAGCAGCTTCCTGTGCCGCTTTGGCAGCAGCCTCGGCCTCCCGCTTGCGGCGACGCACTTCACGTGGGTCGTTCGGTGCACGGCCGTTGGCCAGCATGACAGTGGCAGGTTCGACCACTGCAGGTGCAGGTTCGACCACCGCAGGTGCAGGCTCGGCCACCACTTCTGGCTGGGCTTCGACAACCGGGGCAGGCTGTGCGGCAACCGGAGCGACTTCGA  >  AE015451/2147062‑2147521

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.