| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 2460050 = | 73 (1.060) | 5 (0.080) | 5/324 | NT | 6.7% | coding (243/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase |
| ? | AE015451 | 2460124 = | 70 (1.060) | coding (169/717 nt) | ugpQ | glycerophosphoryl diester phosphodiesterase | |||||
ACCCTGATCTACGGCCATCGCGGCGCCAAGGGCGAAGCACCCGAGAACACCCTGAAGAGCTTTCAGCAATGCCTGTCCCATGGCGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2460289‑2460050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccgTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTGTTCTCGGGTGCTTCGCCCTTGGCGCCGCGATGGCCGTAGATCAGGGTCACGTTCGTTCCTTCAAATCAGGGAAAAATTGGCTCAGGAGGCG > AE015451/2460124‑2460333 ACCCTGATCTACGGCCATCGCGGCGCCAAGGGCGAAGCACCCGAGAACACCCTGAAGAGCTTTCAGCAATGCCTGTCCCATGGCGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGG < 1:339530/236‑1 AAGGGCGAAGCGCCCGAGACCCCCCGGAAGAGCTTTCAGCAATGCCTGTCCCATGGCGTGACCCGCGGCGAGCTGGACCTGCACTTGTCATCCGACAGCGAACTGATGGTCATCCACGACCCCACCCGCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGG < 2:286631/209‑1 CCGAGAACACCCTGAAGAGCTTTCAGCAATGCCTGTCCCATGGCGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATC < 1:1095584/235‑1 CCGAGAACACCCTGAAGAGCTTTCAGCAATGCCTGTCCCATGGCGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGG < 2:807686/196‑1 GCGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCAACCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAG < 1:966401/214‑1 CGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCACGCGCACCACGGGCCGCCGCGGCAAAGTGGGCGAGTACCCGGCCGCCGAACTGGTCCAGATCGATCCCCGCAACGGCGGC > 2:626909/1‑154 CTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGTGGTGCGCTTGAG < 2:63686/161‑1 ACCTGCACTTGTCATCCGACAACGAACTAATGGTCATCCACGCCCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCG < 1:1244783/132‑1 GCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCG > 1:408602/1‑115 GCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCG < 2:408599/115‑1 GCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTGTTCTCGGGTGCTTCGCCCTTGGCGCCGCGATGGCCGTAGATCAGGGTCACGTTCGTTCCTTCAAATCAGGGAAAAATTGGCTCAGGAGGCG < 2:1217996/215‑1 GCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTGTTCTCGGGTGCTTCGCCCTTGGCGCCGCGATGGCCGTAGATCAGGGTCACGTTCGTTC < 1:49840/182‑1 GCCCGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTGTTCTCGGGTGCTT > 2:1136059/1‑137 CGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAG < 1:947927/117‑1 CGTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGACACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTGTTCTCGGGTGCT > 1:358569/1‑133 ACCCTGATCTACGGCCATCGCGGCGCCAAGGGCGAAGCACCCGAGAACACCCTGAAGAGCTTTCAGCAATGCCTGTCCCATGGCGTGACCCGCTGCGAGCTGGACCTGCACTTGTCATCCGACAACGAACTGATGGTCATCCACGACCCCACCCTCAAGCGCACCACGGGCCGGCGCGGCAAAGTGGTCGAGCACCCGGCCGCCGAACTGGTCAAGATCGATGCCCGCAAAGGCGGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/2460289‑2460050‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcccgTGGTGCGCTTGAGGGTGGGGTCGTGGATGACCATCAGTTCGTTGTCGGATGACAAGTGCAGGTCCAGCTCGCAGCGGGTCACGCCATGGGACAGGCATTGCTGAAAGCTCTTCAGGGTGTTCTCGGGTGCTTCGCCCTTGGCGCCGCGATGGCCGTAGATCAGGGTCACGTTCGTTCCTTCAAATCAGGGAAAAATTGGCTCAGGAGGCG > AE015451/2460124‑2460333 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |