New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1360758 =	78 (1.140)	5 (0.080)	5/324	NT	6.1%	intergenic (+18/‑179)	oprH/phoP	Outer membrane protein H1/two component system DNA‑binding transcriptional dual regulator
	?	AE015451	1360915 =	78 (1.190)					intergenic (+175/‑22)	oprH/phoP	Outer membrane protein H1/two component system DNA‑binding transcriptional dual regulator

CCAGGCGCCAGCCGGGACACTGACTACGGTTATGCCTACGGCTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATACACATAAGGAGCTGCACATGAAACTGCTGGTGGTCGAGGACGAAGCCCTGCTTCGC  >  AE015451/1360525‑1360975                                                                                                                                                                                                                                          |                                                                                                                                                                                                                          tgtcctggctgcgcaggcgcgtgatcagctccaggccgctgataccgggcaggcccaggtcgatgatggcaaggtcgaaatggtactgctcggcctggtacagcgcctcttcggcatcagcgaccgcctcgaccacatggccgctttcgcccaggcgggtgtagaggtgatggcgaagcagggcttcgtcctcgaccaccagcagtttcatgtgcagctccttatgtgtattgCCt                                                                                                                                                                                                                         <  1:328045‑M1/3‑1 (MQ=255)                       aCTACGGTTATGCCTACGGCTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCAc                                                                                                                                                                                                   <  1:833218/236‑1 (MQ=255)                         tACGGTTATGCCTACGGCTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACg                                                                                                                                                                                                  <  1:403315/235‑1 (MQ=255)                          aCGGTTATGCCTACGGCTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCAc                                                                                                                                                                                                   <  2:525386/233‑1 (MQ=255)                                         gCTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGCCGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTccccccggc                                                                                                                                                                                   >  1:978939/1‑228 (MQ=255)                                          cTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGtgc                                                                                                                                                                                 >  1:553621/1‑235 (MQ=255)                                               aGGCCGGTGGGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGca                                                                                                                                                                             <  1:21802/234‑1 (MQ=255)                                                ggCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGca                                                                                                                                                                             <  2:904158/233‑1 (MQ=255)                                                   cGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAAc                                                                                                                                                                        <  1:1250549/235‑1 (MQ=255)                                                     gtgtGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAAc                                                                                                                                                                        >  2:1250546/1‑233 (MQ=255)                                                         gATCCAGGACATCACCGACAAGGCCTCGGTCGTACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAATGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAg                                                                                                                                                                   >  2:1202389/1‑234 (MQ=255)                                                         gATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCca                                                                                                                                                                                        >  1:316934/1‑213 (MQ=255)                                                         gATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGa                                                                                                                                                                  >  1:512308/1‑235 (MQ=255)                                                              aGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTcgc                                                                                                                                                                                                         >  1:1173118/1‑191 (MQ=255)                                                               ggACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCtgt                                                                                                                                                            <  1:600156/235‑1 (MQ=255)                                                                 aCATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAAc                                                                                                                                                                        <  2:851565/221‑1 (MQ=255)                                                                   aTCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGcc                                                                                                                                                                                                >  2:1056307/1‑195 (MQ=255)                                                                        cGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGca                                                                                                                                                                             >  1:65469/1‑209 (MQ=255)                                                                        cGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGca                                                                                                                                                                             <  2:65469/209‑1 (MQ=255)                                                                            aaGGCCTCGGTCGAGCTGGGCTACCGTCACCTGCGCACCAATGCCGCGCCCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTgg                                                                                                                                                                                                                  <  2:125362/168‑1 (MQ=255)                                                                                 cTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTg                                                                                                                                         <  1:475716/236‑1 (MQ=255)                                                                                     gTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGtgctg                                                                                                                                                                               >  2:984039/1‑194 (MQ=255)                                                                                     gTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCtgt                                                                                                                                                            <  2:1058202/213‑1 (MQ=255)                                                                                       cGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCgg                                                                                                                                                                                                       >  2:948965/1‑168 (MQ=255)                                                                                        gctcggcctggtacagcgcctcttcggcatcagcgaccgcctcgaccacatggccgctttcgcccaggcgggtgtagaggtgatggcgaagcagggcttcgtcctcgaccaccagcagtttcatgtgcagctccttatgtgtattgCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTg                                                                                                                                   <  1:1041083‑M1/89‑1 (MQ=255)                                                                                           cTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTa                                                                                                                                <  1:1108589/235‑1 (MQ=255)                                                                                           cTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTa                                                                                                                                <  1:1156445/235‑1 (MQ=255)                                                                                               gCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACg                                                                                                                                                                                                  <  1:1258909/165‑1 (MQ=255)                                                                                                  aCCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGtt                                                                                                                        <  1:858868/236‑1 (MQ=255)                                                                                                   ccGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCca                                                                                                                                                                                        >  1:242771/1‑171 (MQ=255)                                                                                                    cGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTc                                                                                                                      <  1:611892/236‑1 (MQ=255)                                                                                                       tACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAgg                                                                                                                   <  1:703293/236‑1 (MQ=255)                                                                                                       tACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAgg                                                                                                                   <  1:1216937/236‑1 (MQ=255)                                                                                                           tGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGGTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTc                                                                                                                                                                                           >  2:937721/1‑160 (MQ=255)                                                                                                              ttcggcatcagcgaccgcctcgaccacatggccgctttcgcccaggcgggtgtagaggtgatggcgaagcagggcttcgtcctcgaccaccagcagtttcatgtgcagctccttatgtgtattgCCTGTACCGGCCCTTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTaca                                                                                                                              >  1:179355‑M1/125‑218 (MQ=255)                                                                                                              gcACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACg                                                                                                                                                                                                  <  1:197185/150‑1 (MQ=255)                                                                                                               cACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACtgt                                                                                                             <  2:1017784/234‑1 (MQ=255)                                                                                                                aCCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCt                                                                                                                                                              >  2:719240/1‑184 (MQ=255)                                                                                                                aCCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTc                                                                                                                                           <  1:1208143/203‑1 (MQ=255)                                                                                                                aCCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTc                                                                                                                                           >  2:1208140/1‑203 (MQ=255)                                                                                                                aCCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTa                                                                                                                                >  1:1022433/1‑214 (MQ=255)                                                                                                                aCCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACtgtg                                                                                                            >  2:517301/1‑234 (MQ=255)                                                                                                                aCCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACtgt                                                                                                             >  2:653291/1‑233 (MQ=255)                                                                                                                     tGCCGCGACCGAGGTGGGCCCACATGGCGGGCCGACGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTAc                                                                                                     <  1:357333/236‑1 (MQ=255)                                                                                                                      cagcgaccgcctcgaccacatggccgctttcgcccaggcgggtgtagaggtgatggcgaagcagggcttcgtcctcgaccaccagcagtttcatgtgcagctccttatgtgtattgCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGa                                                                                                                 >  2:1041080‑M1/117‑223 (MQ=255)                                                                                                                       ccGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACtg                                                                                                   >  1:501109/1‑236 (MQ=255)                                                                                                                        ccaggtaggtctGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACtgt                                                                                                  >  1:1089511/12‑236 (MQ=255)                                                                                                                           gACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGtgctgc                                                                                                                                                                              <  2:177874/157‑1 (MQ=255)                                                                                                                                  ttGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCt                                                                                                                                                                      <  2:23904/157‑1 (MQ=255)                                                                                                                                  gTGGGCGCACATGGCGGGCCGAAGGACGGTACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGa                                                                                                                 <  2:652993/211‑1 (MQ=255)                                                                                                                                  gTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGa                                                                                                         <  2:589910/219‑1 (MQ=255)                                                                                                                                   tGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCCTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGcc                                                                                                                                                                                                >  2:1170128/1‑131 (MQ=255)                                                                                                                                          acaTGGCGGGCCGAAGGCCGGCACCCTGCGTCTTACCAGCAGCGCCCAGCCCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCctct                                                                                                                                                                                                             <  1:222400/111‑1 (MQ=255)                                                                                                                                          acaTGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGtg                                                                                                                                                                                  >  2:598968/1‑138 (MQ=255)                                                                                                                                            ttGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGc                                                                                                                                  <  1:158926/183‑1 (MQ=255)                                                                                                                                                       aaGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTACTGCACaaa                                                                                                                                                                         >  2:1132628/1‑134 (MQ=255)                                                                                                                                                           aCGTCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAgg                                                               <  1:332784/236‑1 (MQ=255)                                                                                                                                                           aCGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTCCTGCAGGTGCTACACAGGGTTCAGGGACTGTGCGact                                                                                                       >  2:871479/1‑194 (MQ=255)                                                                                                                                                             ggCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGaaga                                                                           <  1:89742/222‑3 (MQ=255)                                                                                                                                                                aCCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATCCAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAg                                                                                                                                                                                     <  2:252875/113‑1 (MQ=255)                                                                                                                                                                   cTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAgg                                                                                                                          <  2:948918/169‑1 (MQ=255)                                                                                                                                                                       gTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATacac                                                       >  1:1071814/1‑232 (MQ=255)                                                                                                                                                                         cTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCCGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCTGGTGCTACACAGGTTTCCGGGACTGTGCGATTACtgtg                                                                                                 >  1:188214/1‑188 (MQ=255)                                                                                                                                                                            aCCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTa                                                                   >  2:973661/1‑215 (MQ=255)                                                                                                                                                                               agcagcGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCg                                                                                       >  1:1222731/1‑192 (MQ=255)                                                                                                                                                                                   gggcCCAGACCTCCCTGGCGGCTTCATACAAGTTCTGACGGACGCGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAgg                                                                                                                   <  2:348011/158‑1 (MQ=255)                                                                                                                                                                                     gcCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATACACATAAGGAGCTGCACATGa                                     >  1:463180/1‑236 (MQ=255)                                                                                                                                                                                      cccAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGAt                                                                                                        >  2:1137592/1‑168 (MQ=255)                                                                                                                                                                                                cctGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTc                                                                                                                                           <  1:518785/123‑1 (MQ=255)                                                                                                                                                                                                  tGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGTGCCGGTACAGGCa                                                             >  1:141036/1‑199 (MQ=255)                                                                                                                                                                                                     cggcTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTGCGCGGGCACGCCCGCTCCCACGTGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCt                                                                                                                                 <  2:499607/128‑1 (MQ=255)                                                                                                                                                                                                           cATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCaa                                                            <  1:816717/191‑1 (MQ=255)                                                                                                                                                                                                             tACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAgg                                                                                                                   <  1:948968/134‑1 (MQ=255)                                                                                                                                                                                                                  atgtgcagctccttatgtgtattgCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTa                                                                                                                                >  1:1193965‑M1/25‑116 (MQ=255)                                                                                                                                                                                                                  atgtacagctccttatgtgtattgCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTa                                                                                                                                <  2:1193962‑M1/92‑1 (MQ=255)                                                                                                                                                                                                                    ccTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCt                                                                                                                                                                      <  2:223373/75‑1 (MQ=255)                                                                                                                                                                                                                      ggccggccgGGCCGCGTTGTCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAgg                                                               <  2:294184/174‑1 (MQ=255)                                                                                                                                                                                                                        acggacgAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATACACATAAGGAGCTGCACATGAAACTGCTGGTGGTCGAGGACGAAGCCCTg        <  2:1089508/230‑1 (MQ=255)                                                                                                                                                                                                                          ggacgGGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCgg                                                                     <  2:1268190/167‑1 (MQ=255)                                                                                                                                                                                                                           gacgAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGaaa                                                                            <  2:670977/159‑1 (MQ=255)                                                                                                                                                                                                                            acgAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATACACATAAGGAGCTGCACATGAAACTGCTGGTGGTCGAGGACGAAGCCCTGCTTCGc  <  2:463177/232‑1 (MQ=255)                                                                                                                                                                                                                               aGCCGCGTTATCCGGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAgg                                                               <  1:87867/168‑1 (MQ=255)                                                                                                                                                                                                                                gCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCACAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATACACATAAGGa                                                >  1:1078029/1‑182 (MQ=255)                                                                                                                                                                                                                                gCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGATCCTGCACAAACCt                                                                                                                                                                      >  2:57514/1‑64 (MQ=255)                                                                                                                                                                                                                                       tacCCTGTACTGTCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGcgaaga                                                                           >  2:104225‑M1/4‑146 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                          CCAGGCGCCAGCCGGGACACTGACTACGGTTATGCCTACGGCTTGCAGGCCGGTGTGATCCAGGACATCACCGACAAGGCCTCGGTCGAACTGGGCTACCGTTACCTGCGCACCAATGCCGCGACCGAGGTGGGCGCACATGGCGGGCCGAAGGACGGCACCCTGCGTCTGACCAGCAGCGCCCAGACCTACCTGGCGGCTTCATACAAGTTCTGACGGACGAGCCGCGTTATCCTGTACTGGCCTCTTCGCGGGCACGCCCGCTCCCACAGGTGCTGCACAAACCTCAGAACCTGTGCAGTGCCTTGGGTTTCTGCAGGTGCTACACAGGTTTCAGGGACTGTGCGATTACTGTGGGAGCGGGCGTGCCCGCGAAAGGGCCGGTACAGGCAATACACATAAGGAGCTGCACATGAAACTGCTGGTGGTCGAGGACGAAGCCCTGCTTCGC  >  AE015451/1360525‑1360975

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.