New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 3070742 =75 (1.090)5 (0.080) 4/324 NT 6.9% intergenic (+310/‑44) aldB‑II/pqqD‑II aldehyde dehydrogenase/coenzyme PQQ synthesis protein D
?AE015451 3070765 = 63 (0.960)intergenic (+333/‑21) aldB‑II/pqqD‑II aldehyde dehydrogenase/coenzyme PQQ synthesis protein D

GGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGCTGCTGGACGGCCACAGTACCGTGG  >  AE015451/3070515‑3070951
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                 
acattggggaagcgttgtgccaggcggtcgatgaccgttgccacggtactgtggccgtccagcagctcgaggacccagccggcactggcattgagctcgatgatgcccccggcgtacaacagcacgtggcaagccttccgtggctcccagtccaggcgcaagcctcgccccaaggcaagggcctgctggcgatcaatcaggttcacaggcgcatactccaggaggatCCGGcc                                                                                                                                                                                                              <  2:1128637‑M1/6‑1 (MQ=255)
             aaGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGcc                                                                                                                                                                                                        <  1:997382/226‑1 (MQ=255)
                           gcatgCCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:875671/221‑1 (MQ=255)
                                        gTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCtgt                                                                                                                                                                      >  2:1203690/1‑233 (MQ=255)
                                                  aCCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACGAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGACGTGACGATGTATTTCGCCAACCGTTGCTGAcggccc                                                                                                                                                                                                                  >  1:1285699/1‑179 (MQ=255)
                                                    cccGCAAGCCCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  2:711474/196‑1 (MQ=255)
                                                                 tCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCt                                                                                                                                                                <  2:1153279/214‑1 (MQ=255)
                                                                          gCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:755866/174‑1 (MQ=255)
                                                                             ttCGGTCCAGTCCCCCCCCGTGCATTAATGCTTCTACCGAAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:553847/171‑1 (MQ=255)
                                                                              tCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCCCtgtgcc                                                                                                                                                                                                >  1:43912/1‑167 (MQ=255)
                                                                              tCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAg                                                                                                                             >  1:449706/1‑236 (MQ=255)
                                                                                     aGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGcc                                                                                                                                             >  1:417337/1‑213 (MQ=255)
                                                                                               cGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTgg                                                                                                            >  1:921809/1‑236 (MQ=255)
                                                                                                    aTTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCtt                                                                                                                         >  2:386893/1‑218 (MQ=255)
                                                                                                    aTTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGAcctgtctct                                                                                                       >  1:712765/1‑228 (MQ=255)
                                                                                                     ttAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:984951/147‑1 (MQ=255)
                                                                                                      tAATGCTTCTACCGGAATCCTCCGGCACAAAAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACgg                                                                                                                                                                                                    <  1:538703/141‑1 (MQ=255)
                                                                                                           cccggcgtacaacagcacgtggcaagccttccgtggctcccagtccaggcgcaagcctcgccccaaggcaagggcctgctggcgatcaatcaggttcacaggcgcatactccaggaggatcc                                                                                                                                                                                                                  >  2:298190‑M1/121‑122 (MQ=255)
                                                                                                           cTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGa                                                                                                  >  2:1077427/1‑234 (MQ=255)
                                                                                                              cTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTgggg                                                                                                                                 >  1:104735/1‑200 (MQ=255)
                                                                                                                 ccGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCggattga                                                                                                                                                          >  1:44691/1‑172 (MQ=255)
                                                                                                                 ccGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGc                                                                                          >  1:465118/1‑236 (MQ=255)
                                                                                                                 ccGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGc                                                                                          >  1:595444/1‑236 (MQ=255)
                                                                                                                 ccGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGAGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGt                                                                                                                                                                                                   >  2:378456/1‑131 (MQ=255)
                                                                                                                    gAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCAc                                                                                       <  1:1203693/236‑1 (MQ=255)
                                                                                                                      cccctccGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGa                                                                                                                <  1:666178/207‑1 (MQ=255)
                                                                                                                       tcctccGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATgcg                                                                                                                                                                           >  2:355908/1‑149 (MQ=255)
                                                                                                                         ctccGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGCCGGCCCGCCCATCGCCCCCGTGGCCGGATCCTCCTTGAg                                                                                                                                                                                 >  2:87766/1‑141 (MQ=255)
                                                                                                                         ccccGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:28008/125‑1 (MQ=255)
                                                                                                                                            tggctcccagtccaggcgcaagcctcgccccaaggcaagggcctgctggcgatcaatcaggttcacaggcgcatactccaggaggatCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCt                                                                                                                                                                        <  2:1225486‑M1/44‑1 (MQ=255)
                                                                                                                                            cTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCTCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTgga                                                                                                                                                                                                >  2:443206/1‑106 (MQ=255)
                                                                                                                                            cTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCTCCACGGTGGCCGTATCCTCCTGGAGTATGCGCCTGTGAACCtg                                                                                                                                                               >  2:49360/1‑140 (MQ=255)
                                                                                                                                              tGCCCTTTGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCccttgc                                                                                                                                        <  2:575051/161‑1 (MQ=255)
                                                                                                                                              tGCCCTATGTGGACTAACCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGcatca                                                              <  1:386896/235‑1 (MQ=255)
                                                                                                                                               gCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGcatcat                                                             >  1:490292/1‑235 (MQ=255)
                                                                                                                                                      gtgGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  2:52718/98‑1 (MQ=255)
                                                                                                                                                       gggACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCAc                                                                                       <  1:1229360/200‑1 (MQ=255)
                                                                                                                                                         gACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAg                                                                                                                             <  2:712762/161‑1 (MQ=255)
                                                                                                                                                           cTAACCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGAcggcccg                                                                                                                                                                                                                 <  1:201882/75‑1 (MQ=255)
                                                                                                                                                            tAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGGTTGCCa                                                                                        >  2:871829/1‑195 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:802836/91‑1 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               >  2:802833/1‑91 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATgcgc                                                                                                                                                                          >  1:173784/1‑112 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATgcg                                                                                                                                                                           >  1:1189899/1‑111 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATgcg                                                                                                                                                                           <  2:1189896/111‑1 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTAc                                                                           <  2:522069/207‑1 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTAc                                                                           >  1:522072/1‑207 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCggg                                                                     >  1:719449/1‑213 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGcag                                                                >  1:925370/1‑217 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCgt                                                          >  1:405816/1‑223 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAg                                              >  1:1093276/1‑236 (MQ=255)
                                                                                                                                                             aaaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTGGCCTTGGGGCGAGGCt                                                                                                                          >  2:3471/1‑160 (MQ=255)
                                                                                                                                                              cccccGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGAtcctc                                                                                                                                                                                       <  2:173784/96‑1 (MQ=255)
                                                                                                                                                              caagcctcgccccaaggcaagggcctgctggcgatcaatcaggtccacaggcgcatactccaggacgatCCGGCCATCGCCACGGTGGCCGCACCCTCCCGGAGTAGGCGCCt                                                                                                                                                                        <  2:54279‑M1/44‑1 (MQ=255)
                                                                                                                                                              accccGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  2:946440/88‑1 (MQ=255)
                                                                                                                                                              accccGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGcc                                                                                                                                                                                               <  1:290697/88‑1 (MQ=255)
                                                                                                                                                              accccGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCcctt                                                                                                                                          <  1:347439/141‑1 (MQ=255)
                                                                                                                                                              aaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAg                                                                                                                             <  1:629988/156‑1 (MQ=255)
                                                                                                                                                              aaCCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCt                                                                                  <  2:719446/199‑1 (MQ=255)
                                                                                                                                                               ccccGCCTATACCGTCCTGCGCATTGGCTTCGACGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATgcg                                                                                                                                                                           <  2:144482/108‑1 (MQ=255)
                                                                                                                                                               ccccGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAgg                                                                                                                                               <  2:178878/136‑1 (MQ=255)
                                                                                                                                                                 ccGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGcc                                          >  1:1128640/1‑236 (MQ=255)
                                                                                                                                                                  cGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGcatc                                                               <  1:821528/214‑1 (MQ=255)
                                                                                                                                                                  cGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTc                                                      >  1:1020196/1‑223 (MQ=255)
                                                                                                                                                                       ataCCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCggggg                                                                   >  1:873308/1‑205 (MQ=255)
                                                                                                                                                                           cGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTcc                                <  1:1091207/236‑1 (MQ=255)
                                                                                                                                                                           cGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTcc                                >  1:85367/1‑236 (MQ=255)
                                                                                                                                                                            gACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTAc                                                                           <  2:449703/192‑1 (MQ=255)
                                                                                                                                                                               cTGCGCCTTGGCTGCGAGGTGACGATGTATTTCGCCAACCGTTGATGGCGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTAt                                                                                                                                                                              <  2:225125/90‑1 (MQ=255)
                                                                                                                                                                                    cATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTgcg                                                                                                                      >  2:725092/1‑141 (MQ=255)
                                                                                                                                                                                     cctgctggcgatcaatcaggttcacaggcgcatactccaggaggatCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCtt                                                                                            <  1:1223271‑M1/120‑1 (MQ=255)
                                                                                                                                                                                     cctgctggcgatcaatcaggttcacaggcgcatactccaggaggatCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCtt                                                                                            >  2:1223268‑M1/47‑166 (MQ=255)
                                                                                                                                                                                     cctgctggcgatcaatcaggttcacaggcgcatactccaggaggatCCGGCCATCGCCAATGTGGCCGGATACACCTGGAGTATgcg                                                                                                                                                                           <  1:75556‑M1/41‑1 (MQ=255)
                                                                                                                                                                                        ggCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGctgctg                     <  2:739535/234‑1 (MQ=255)
                                                                                                                                                                                                  tGACGGTGTATTTCGCCAGCCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTggg                                                                                                                                  <  2:167108/115‑1 (MQ=255)
                                                                                                                                                                                                      gATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGcc                                                <  2:921806/193‑1 (MQ=255)
                                                                                                                                                                                                      gATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGCTGCTGGACGGCCACAGTAc       >  1:504175/1‑234 (MQ=255)
                                                                                                                                                                                                                 ccAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGctgctg                     <  2:673692/209‑1 (MQ=255)
                                                                                                                                                                                                                 ccAACCGTTGATGACGGCCCGGCCATCGCCACGGGGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCGGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCtgtt                                                                               >  2:227490/1‑151 (MQ=255)
                                                                                                                                                                                                                  cAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCGGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGctgctg                     <  1:49360/208‑1 (MQ=255)
                                                                                                                                                                                                                    aCCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCAGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTCGTACGCCGGGGGcatca                                                              <  2:643236/165‑1 (MQ=255)
                                                                                                                                                                                                                       gTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTg                                                                                                             >  2:558014/1‑115 (MQ=255)
                                                                                                                                                                                                                       gTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACgg                                                                                                   >  2:350419/1‑125 (MQ=255)
                                                                                                                                                                                                                            tgaCGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGGACGCCGGGGGCatcatc                                                            <  2:744249/159‑1 (MQ=255)
                                                                                                                                                                                                                             taCGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCtt                                                                                            <  2:179487/125‑1 (MQ=255)
                                                                                                                                                                                                                               cggcccggccATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGCTGCTGGACGGCCACAGTACCGTgg  <  2:595441/214‑1 (MQ=255)
                                                                                                                                                                                                                                   CCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAAGCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGc                                                        <  2:1104308‑M1/156‑1 (MQ=255)
                                                                                                                                                                                                                                   CCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTc                              <  1:1136224‑M1/182‑1 (MQ=255)
                                                                                                                                                                                                                                   |                                                                                                                                                                                                                 
GGCGAGCCCGCAAAAGGGCCGGCACATGCATGGCCTACCCGTACCAACGCACCCCGCAAGCTCGTTCCAAAGTAGCATTCGGTCCAGTCCGCCCCCGTGCATTAATGCTTCTACCGGAATCCTCCGGCACAAGAAGAGGACTTGCCCTATGTGGACTAAACCCGCCTATACCGACCTGCGCATTGGCTTCGAAGTGACGATGTATTTCGCCAACCGTTGATGACGGCCCGGCCATCGCCACGGTGGCCGGATCCTCCTGGAGTATGCGCCTGTGAACCTGATTGATCGCCAGCAGGCCCTTGCCTTGGGGCGAGGCTTGCGCCTGGACTGGGAGCCACGGAAGGCTTGCCACGTGCTGTTGTACGCCGGGGGCATCATCGAGCTCAATGCCAGTGCCGGCTGGGTCCTCGAGCTGCTGGACGGCCACAGTACCGTGG  >  AE015451/3070515‑3070951

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.