New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4261401	46 (0.670)	6 (0.090)	6/314	NT	12.0%	coding (1361/2460 nt)	PP_3734	putative ABC transporter, permease protein
	?	AE015451	= 4261493	45 (0.710)					coding (1269/2460 nt)	PP_3734	putative ABC transporter, permease protein

CGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAACCATGGCCCCTGCGCCAGT  >  AE015451/4261174‑4261628                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                    cGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGcc                                                                                                                                                                                                                             <  1:747934/236‑1 (MQ=255)            aCGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTg                                                                                                                                                                                                                  >  1:645167/1‑236 (MQ=255)                   ccccGGGCTGCGGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTgcg                                                                                                                                                                                                                <  1:244990/231‑1 (MQ=255)                         gctgctgctTGAGCCCCTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCgg                                                                                                                                                                                                     <  1:819064/236‑1 (MQ=255)                                           cGACTAGCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgccag                                                                                                                                                                                    <  1:472483/235‑1 (MQ=255)                                                  cTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAGCGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgcc                                                                                                                                                                                      <  1:1035652/226‑1 (MQ=255)                                                             gggCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgcc                                                                                                                                                                                      <  2:1192783/215‑1 (MQ=255)                                                                   tgtCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgccagcca                                                                                                                                                                                 <  1:372568/214‑1 (MQ=255)                                                                       ccGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGcc                                                                                                                                                        <  1:825938/235‑1 (MQ=255)                                                                            gggTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCa                                                                                                                                                             >  1:644795/1‑225 (MQ=255)                                                                                      cAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTAcc                                                                                                                                                                       <  2:392982/205‑1 (MQ=255)                                                                                            ggcggAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGGCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCCGGCAGCCACGAACCATTGCGCCAATGGCCGGTgg                                                                                                                                                                                                  >  2:151734/1‑172 (MQ=255)                                                                                                gagaGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCggcgctgctgttgccggcc                                                                                                                                                                                                                  <  2:771483‑M1/152‑20 (MQ=255)                                                                                                gagaGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCggcgctgctgttgccggcc                                                                                                                                                                                                                  >  1:771486‑M1/1‑133 (MQ=255)                                                                                                gagaGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAAca                                                                                                                                                 >  1:537374/1‑217 (MQ=255)                                                                                                            tCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAg                                                                                                                  <  2:521278/236‑1 (MQ=255)                                                                                                                  cAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCt                                                                                                                                                                      >  2:717865/1‑178 (MQ=255)                                                                                                                   aaCCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGGGGCAacga                                                                                                                                                                                            >  2:248841/1‑155 (MQ=255)                                                                                                                        aCAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGAcgc                                                                                                                                                                                         >  2:494051/1‑153 (MQ=255)                                                                                                                                 tggCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgcc                                                                                                                                                                                      <  2:55734/145‑1 (MQ=255)                                                                                                                                        accccTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCACAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAAcc                                                                                                                         <  2:771099/199‑1 (MQ=255)                                                                                                                                           ccTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGAt                                                                                                                                                                   >  2:610789/1‑156 (MQ=255)                                                                                                                                                    tgctgcCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGaca                                                                             <  1:91480/233‑1 (MQ=255)                                                                                                                                                         cccACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGc                                                                      <  1:696138/235‑1 (MQ=255)                                                                                                                                                              gCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCggcgctgctgttgccggccttgctcgatcaggtactggcctggctggcgcgtcgttgccaccggccattggcgcaatggttcgtggctgacagccgccagcagctgccagccctgagcctggcgttggtcgcccttttgctggccctggctgcca                                                                          >  2:644792‑M1/1‑71 (MQ=255)                                                                                                                                                              gCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGccc                                                                    >  1:1012122/1‑232 (MQ=255)                                                                                                                                                                 aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCggcgctgctgttgccggcctt                                                                                                                                                                                                                >  2:1006387‑M1/1‑68 (MQ=255)                                                                                                                                                                 aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCggcgctgctgttgccggcctt                                                                                                                                                                                                                <  1:1006390‑M1/89‑22 (MQ=255)                                                                                                                                                                 aaCACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATgg                                                                                                             <  2:868305/188‑1 (MQ=255)                                                                                                                                                                      tGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgccagcca                                                                                                                                                                                 >  1:813393/1‑115 (MQ=255)                                                                                                                                                                      tGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCgccagcca                                                                                                                                                                                 <  2:813390/115‑1 (MQ=255)                                                                                                                                                                      tGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCgccgccagcagctgccagccctgagcctggcgttggtcgcccttttgctggccctggctgccagtgttggc                                                                  >  2:644792‑M2/1‑155 (MQ=255)                                                                                                                                                                      tGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGCACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGc                                                               >  1:319681/1‑229 (MQ=255)                                                                                                                                                                            ccAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCgccgccagca                                                                                                                               >  1:1052725‑M2/1‑149 (MQ=255)                                                                                                                                                                                ggCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGc                                              <  1:749692/236‑1 (MQ=255)                                                                                                                                                                                 gCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCa                                                                   >  1:526889/1‑214 (MQ=255)                                                                                                                                                                                 gCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGcc                                             >  1:1015336/1‑236 (MQ=255)                                                                                                                                                                                     gCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCggccctgctgttgccggccttgcgcgatcaggtactggcctg                                                                                                                                                                                           >  2:109597‑M1/1‑48 (MQ=255)                                                                                                                                                                                       aaaaGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGaa                                                                                                         >  1:717647/1‑170 (MQ=255)                                                                                                                                                                                        aaaGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAgcc                                                               >  1:445167/1‑209 (MQ=255)                                                                                                                                                                                         aaGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAAcgc                                                                                                      >  1:1229988/1‑171 (MQ=255)                                                                                                                                                                                         aaGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAAcag                                                      >  2:1118127/1‑219 (MQ=255)                                                                                                                                                                                          ggggCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAgccagg                                                                                                                                                                               <  2:281052/96‑1 (MQ=255)                                                                                                                                                                                                  cAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCt                                                                                                                                                                                                                                    <  2:865918/36‑1 (MQ=255)                                                                                                                                                                                                   aaCGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTa                                        >  1:357600/1‑223 (MQ=255)                                                                                                                                                                                                      gCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGtt                         <  1:1118130/235‑1 (MQ=255)                                                                                                                                                                                                           gCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAAcc                   <  1:524574/236‑1 (MQ=255)                                                                                                                                                                                                              cAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGCGCAAGGCCGGCAAccgcag                                                                                                                                             >  2:34370/1‑111 (MQ=255)                                                                                                                                                                                                                gggCTGGCAGCGGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAACCATgg               <  1:1027862/235‑1 (MQ=255)                                                                                                                                                                                                                    tGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCgccgccagcagc                                                                                                                             >  2:483345‑M2/1‑109 (MQ=255)                                                                                                                                                                                                                     ggCCGCTGCTGGCGGCTGTCAGCCACGACCCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGaca                                                                             <  1:157218/168‑1 (MQ=255)                                                                                                                                                                                                                        aGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCC‑AGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAACCATGGCCCCTgcgc      >  1:251763/1‑235 (MQ=255)                                                                                                                                                                                                                         gctgctGGCGGCggcgctgctgttgccggccttgctcgatcaggtactggcctggctggcgcgtcgttgccaccggccattggcgcaatggttcgtggctgacagccgccagcagctgcca                                                                                                                        >  2:483345‑M1/1‑12 (MQ=255)                                                                                                                                                                                                                           tgctgGCGGCggcgctgctgttgccggccttgctcgatcaggtactggcctggctggcgcgtcgttgccaccggccattggcgcaatggttcgtggctgacagccgccagcagctgccagccctgagcctggcgttggtcgcccttttgctggccctgg                                                                                >  1:1052725‑M1/1‑10 (MQ=255)                                                                                                                                                                                                                             ctgGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAACCATGGCCCCTGCGCCAGt  <  1:548434/235‑1 (MQ=255)                                                                                                                                                                                                                               ggcggcTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGaa                                                                                                         >  2:1262144/1‑130 (MQ=255)                                                                                                                                                                                                                               ggcggcTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAACGCCTGCCGTTGCAACCATGGCCCCTGCGCCAga  >  1:318992/1‑232 (MQ=255)                                                                                                                                                                                                                               ggcggcTGTAAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTaagcaag                                                                                            <  2:860185/143‑1 (MQ=255)                                                                                                                                                                                                                                  ggcTGTCAGCCACGACCCATTGCGCCAATGGCGGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTaagca                                                                                              <  1:1187875/138‑1 (MQ=255)                                                                                                                                                                                                                                    cTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAACCATGGCCCCTGCGCCAGt  <  1:898074/228‑1 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                                    CGGGCATGACCACGCTGGCCCCGGGCTGCTGCTTGAGCCACTCGACTATCTGCAAGCCTTGGGCCGTGTCCCGCGGGGTGACATACAGGTCGGCGGAGAGGCGCAGGTCAAGCCAACCGACAAACGTCTTGCGAAAACCCTCGGTCATGCTGCCCACGCCAACACTGGCAGCCAGGGCCAGCAAAAGGGCGACCAACGCCAGGCTCAGGGCTGGCAGCTGCTGGCGGCTGTCAGCCACGAACCATTGCGCCAATGGCCGGTGGCAACGACGCGCCAGCCAGGCCAGTACCTGATCGAGCAAGGCCGGCAACAGCAGCGCCGCCGCCAGCAGCAACCCTGCCAGCATGGCGAACGCGCTAAGCAAGCCAGCCCCGAAGACACCACAGCCCAAGGCCAGCAACAGCAGCAGGCCCGCTAGCAAAGCCTGCCGTTGCAACCATGGCCCCTGCGCCAGT  >  AE015451/4261174‑4261628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.