New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4642610 =	63 (0.920)	5 (0.080)	5/326	NT	7.7%	coding (553/897 nt)	PP_4107	Transcriptional regulator, LysR family
	?	AE015451	4642634 =	59 (0.890)					coding (577/897 nt)	PP_4107	Transcriptional regulator, LysR family

GCGCCCGCTGGCTGGTGCCCCGGCTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCTGGTGGTGGCCTGGGACC  >  AE015451/4642377‑4642838                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                     aagtgcctcccgttgcttgccacagggtggtcccaggccaccaccagcttgccttcgctcagctcttcggccaccagatagcggggaatcagggctatgccgcagccggagatggccgcgcggatacacaggtagaacgtgtcgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaac                                                                                                                                                                                                                                      <  1:494417‑M1/1‑1 (MQ=255) aagtgcctcccgttgcttgccacagggtggtcccaggccaccaccagcttgccttcgctcagctcttcggccaccagatagcggggaatcagggctatgccgcagccggagatggccgcgcggatacacaggtagaacgtgtcgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCa                                                                                                                                                                                                                                     >  1:851921‑M1/234‑235 (MQ=255)        tcccgttgcttgccacagggtggtcccaggccaccaccagcttgccttcgctcagctcttcggccaccagatagcggggaatcagggctatgccgcagccggagatggccgcgcggatacacaggtagaacgtgtcgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCAGgc                                                                                                                                                                                                                                  <  1:707905‑M1/5‑1 (MQ=255)            gttgcttgccacagggtggtcccaggccaccaccagcttgccttcgctcagctcttcggccaccagatagcggggaatcagggctatgccgcagccggagatggccgcgcggatacacaggtagaacgtgtcgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaac                                                                                                                                                                                                                                      <  2:501342‑M1/1‑1 (MQ=255)            gttgcttgccacagggtggtcccaggccaccaccagcttgccttcgctcagctcttcggccaccagatagcggggaatcagggctatgccgcagccggagatggccgcgcggatacacaggtagaacgtgtcgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaac                                                                                                                                                                                                                                      >  1:501345‑M1/223‑223 (MQ=255)            ctggTGCCCCGGCTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgactga                                                                                                                                                                                                                         <  1:1202429/236‑1 (MQ=255)             tggTGCCCCGGCTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGctgactga                                                                                                                                                                                                                         <  1:771500/235‑1 (MQ=255)                   cccGGCTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGc                                                                                                                                                                                                                  <  1:644779/236‑1 (MQ=255)                        cTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGtt                                                                                                                                                                                                             >  1:149450/1‑236 (MQ=255)                        cTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGt                                                                                                                                                                                                              >  1:891165/1‑235 (MQ=255)                           aaGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCAcc                                                                                                                                                                                                                    <  1:333924/226‑1 (MQ=255)                                        aCCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgtg                                                                                                                                                                                                   >  2:997565/1‑230 (MQ=255)                                             tACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGa                                                                                                                                                                                        <  1:1176210/236‑1 (MQ=255)                                                ccACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAg                                                                                                                                                                                       <  2:638105/234‑1 (MQ=255)                                                               gATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGtt                                                                                                                                                                      <  1:1012159/236‑1 (MQ=255)                                                                  gtgCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTg                                                                                                                                                                                  >  1:642860/1‑221 (MQ=255)                                                                       cAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCgg                                                                                                                                                                                             >  1:1143383/1‑205 (MQ=255)                                                                       cAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCgg                                                                                                                                                                                             <  2:1143380/205‑1 (MQ=255)                                                                        aaCGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAg                                                                                                                                                                                                                                    >  2:494414/1‑165 (MQ=255)                                                                            aGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTgg                                                                                                                                                          >  1:533386/1‑235 (MQ=255)                                                                                         cGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGccc                                                                                                                                                                                                                                      <  2:369481/146‑1 (MQ=255)                                                                                         cGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGt                                                                                                                                                        <  1:1022869/224‑1 (MQ=255)                                                                                         cGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGt                                                                                                                                                        >  2:1022866/1‑224 (MQ=255)                                                                                          gACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGaa                                                                                                                                                                           >  1:607646/1‑204 (MQ=255)                                                                                                    aGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTg                                                                                                                                                           >  1:997322/1‑210 (MQ=255)                                                                                                      gCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGcc                                                                                                                                               <  1:122002/220‑1 (MQ=255)                                                                                                             cGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGcc                                                                                                                                               <  1:993233/213‑1 (MQ=255)                                                                                                              ggACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGa                                                                                                                                            >  1:82795/1‑215 (MQ=255)                                                                                                              ggACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCcgcg                                                                                                                         >  2:417237/1‑234 (MQ=255)                                                                                                                aCGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCcgcgacac                                                                                                                     <  1:1146447/236‑5 (MQ=255)                                                                                                                aCGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTc                                                                                                                     <  1:403622/236‑1 (MQ=255)                                                                                                                  gTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCg                                                                                                                    <  1:507742/235‑1 (MQ=255)                                                                                                                   tCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGa                                                                                                                                                                                        <  1:92211/166‑1 (MQ=255)                                                                                                                        gttttCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACggg                                                                                                                              <  2:1063912/218‑1 (MQ=255)                                                                                                                            tcttcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCg                                                                                                                    <  1:418012/225‑1 (MQ=255)                                                                                                                              ttcGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCgcgcgg                                                                                                                      <  1:48948/221‑3 (MQ=255)                                                                                                                                   ccAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGcc                                                                                                                                                                                           >  2:1168823/1‑147 (MQ=255)                                                                                                                                         cACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCtt                                                                                                                      <  1:978992/210‑1 (MQ=255)                                                                                                                                         cACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcg                                                                                              >  2:1001950/1‑234 (MQ=255)                                                                                                                                         acgtgtcgaagcgcggcccgtggtagctgttctggctatgcgacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCAGgc                                                                                                                                                                                                                                  <  1:72552‑M1/5‑1 (MQ=255)                                                                                                                                          aCCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGGGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcgcgc                                                                                           >  1:121633/1‑236 (MQ=255)                                                                                                                                               gCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCa                                                                                      <  1:701907/236‑1 (MQ=255)                                                                                                                                               cgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaac                                                                                                                                                                                                                                      >  2:1183346‑M1/92‑92 (MQ=255)                                                                                                                                               cgaagcgcggcccgtggtagctgttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaac                                                                                                                                                                                                                                      <  1:1183349‑M1/1‑1 (MQ=255)                                                                                                                                                     ggCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCgtg                                                                                                                                                                                                   <  1:22446/121‑1 (MQ=255)                                                                                                                                                               aTCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCgg                                                                         <  1:414752/233‑1 (MQ=255)                                                                                                                                                                tCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCt                                                                                                                                                                                   <  1:221837/126‑1 (MQ=255)                                                                                                                                                                 cGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATg                                                                                                                                                                             <  2:752442/131‑1 (MQ=255)                                                                                                                                                                      ttctggctatgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATTAATGGTTCCTGGGGCt                                                                                                                                                             <  2:953970‑M1/74‑1 (MQ=255)                                                                                                                                                                      tgttCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATa                                                                                                                                                  <  1:1171308/153‑1 (MQ=255)                                                                                                                                                                      tgttCAGCGAAGAAGTGGTGCCGGTATGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGCATGGTTCCTGGGGCTTg                                                                                                                                                           >  2:766025/1‑144 (MQ=255)                                                                                                                                                                          cAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGAtt                                                            <  1:595694/235‑1 (MQ=255)                                                                                                                                                                             cGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCAAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCcgcgcg                                                                                          <  2:470390/202‑1 (MQ=255)                                                                                                                                                                              atgcaacccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCt                                                                                                                       <  1:318528‑M1/112‑1 (MQ=255)                                                                                                                                                                                agaagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGATGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGt                                                                                                              <  2:776743/179‑1 (MQ=255)                                                                                                                                                                                agaagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCCTAGCCCTGATTCCCCg                                                       >  1:1258732/1‑234 (MQ=255)                                                                                                                                                                                agaagTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTcccc                                                        >  1:506770/1‑233 (MQ=255)                                                                                                                                                                                   acccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCAGgcg                                                                                                                                                                                                                                 <  1:177499‑M1/6‑1 (MQ=255)                                                                                                                                                                                   acccaagccccaggaaccattcatgccaggcctccggccgcgacacgcattgcaaCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGc                                                                                                                             <  1:570580‑M1/106‑1 (MQ=255)                                                                                                                                                                                     tggtgCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTcccc                                                        <  1:397445/228‑1 (MQ=255)                                                                                                                                                                                       gtgCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCt                                                 <  2:533383/233‑1 (MQ=255)                                                                                                                                                                                       gggCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCgg                                                                               <  2:1137117/201‑1 (MQ=255)                                                                                                                                                                                            ggTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGGTCCTGGGGCTTGGGTTGCATAGCCAGAACCGCTACCACGGGCCGCGCtg                                                                                                                      >  2:98322/1‑158 (MQ=255)                                                                                                                                                                                                  cAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATcc                                                                                               <  1:1212671/176‑1 (MQ=255)                                                                                                                                                                                                    gCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCgg                                                                         <  1:156795/196‑1 (MQ=255)                                                                                                                                                                                                      ccGCAGCGGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCt                                                 <  2:1017936/218‑1 (MQ=255)                                                                                                                                                                                                        catgccaggcctccggccgcgacacgcattgcaaCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGc                              <  1:659677‑M1/201‑1 (MQ=255)                                                                                                                                                                                                          aGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCtg                                                >  1:1222410/1‑215 (MQ=255)                                                                                                                                                                                                             tgctgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAgg                         >  1:919155/1‑235 (MQ=255)                                                                                                                                                                                                               ctgGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCgg                                                                         <  2:926216/185‑1 (MQ=255)                                                                                                                                                                                                               cgggCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCgg                                                                               <  2:1225648/177‑1 (MQ=255)                                                                                                                                                                                                                    cagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCtgg                 <  1:1001953/236‑1 (MQ=255)                                                                                                                                                                                                                    cagccaCCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCtg                  <  1:1155087/235‑1 (MQ=255)                                                                                                                                                                                                                        ccgcgacacgcattgcaaCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGCGTCGCGGCCGGAGGCCCGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTAcc                                                                                                                                   <  1:1275330‑M1/100‑1 (MQ=255)                                                                                                                                                                                                                        caCCGTTTCGACAGCGCCCAGGCGCTGACTGTGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACggg                                                                                                                              <  2:841794/123‑1 (MQ=255)                                                                                                                                                                                                                               tCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCTGGTGGTGGCCTgg      >  1:1234963/1‑236 (MQ=255)                                                                                                                                                                                                                                cGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAAGGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCGGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCt                                                 <  2:27099/192‑1 (MQ=255)                                                                                                                                                                                                                                  aCAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCTGGTGGTGGCCTg       <  2:1068826/232‑1 (MQ=255)                                                                                                                                                                                                                                    aGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCTGGTGGTGGCCTGGGacc  <  1:163891/235‑1 (MQ=255)                                                                                                                                                                                                                                         ccAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCgg                                                                         <  2:904848/159‑1 (MQ=255)                                                                                                                                                                                                                                         ccAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGa                            <  1:302049/204‑1 (MQ=255)                                                                                                                                                                                                                                          |                                                                                                                                                                                                                                     GCGCCCGCTGGCTGGTGCCCCGGCTCAAGGGTTTTGGTGACCGCTACCCACGCATTCACCTGGATGTGCGCAACGAGCTGGAGCCATTCGACCTGGTACAGGCCAAGGCGGACGTCGCCTTTTTCTTCGGCCAGGGCACCTGGCCCGGGGCGACCTGCATCGAGTTGTTCAGCGAAGAAGTGGTGCCGGTGTGCAGCCCGCAGCTGCTGGCCAGCCACCGTTTCGACAGCGCCCAGGCGCTGACTGAGCACCGCCTGTTGCAATGCGTGTCGCGGCCGGAGGCCTGGCATGAATGGTTCCTGGGGCTTGGGTTGCATAGCCAGAACAGCTACCACGGGCCGCGCTTCGACACGTTCTACCTGTGTATCCGCGCGGCCATCTCCGGCTGCGGCATAGCCCTGATTCCCCGCTATCTGGTGGCCGAAGAGCTGAGCGAAGGCAAGCTGGTGGTGGCCTGGGACC  >  AE015451/4642377‑4642838

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.