| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4946072 = | 73 (1.060) | 3 (0.050) | 3/324 | NT | 4.1% | coding (509/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein |
| ? | AE015451 | 4946103 = | 69 (1.050) | coding (478/1143 nt) | flhB | flagellin export apparatus, substrate specificity protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
AGTTGGCGAATACGTTGCTTGACTTCGGGCTTGCCCTCGCTGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAACCACGAACAGCAGGATCAGCACCGGCTGCACCGCC > AE015451/4945838‑4946305 | tcctgctggcctcgggcaagatggccatatgggcggtgcagccggtgctgatcctgctgttcgtggtttccttcgtggcgcccatcgcgcttagcggcttcctgttctcgggcagcttgctgcagccaaaattcagccgcatgaacccgctgtcggggatcaagcgcatgttctcgatgcaggccctgactgaattgctcaaggcgctggccaagttcttcgtgattctggtggtg < 1:112691‑M1/2‑1 (MQ=255) gCGAATACGTTGCTTGACTTCGGGCTTGCCCTCGCTGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGt < 1:1192428/236‑1 (MQ=255) ggcctcgggcaagatggccatatgggcggtgcagccggtgctgatcctgctgttcgtggtttccttcgtggcgcccatcgcgcttagcggcttcctgttctcgggcagcttgctgcagccaaaattcagccgcatgaacccgctgtcggggatcaagcgcatgttctcgatgcaggccctgactgaattgctcaaggcgctggccaagttcttcgtgattctggtggtg < 2:1281996‑M1/2‑1 (MQ=255) aaTACGTTGCTTGACTTCGGGCTTGCCCTCGCTGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCAc < 1:1131795/236‑1 (MQ=255) gatggccatatgggcggtgcagccggtgctgatcctgctgttcgtggtttccttcgtggcgcccatcgcgcttagcggcttcctgttctcgggcagcttgctgcagccaaaattcagccgcatgaacccgctgtcggggatcaagcgcatgttctcgatgcaggccctgactgaattgctcaaggcgctggccaagttcttcgtgattctggtggTGGCgg > 1:976203‑M1/216‑221 (MQ=255) ttCGGGCTTGCCCTCGCTGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGcacca > 2:784527/1‑233 (MQ=255) gggCTTGCCCTCGCTGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCg > 1:567556/1‑236 (MQ=255) tGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCGTCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCAcc > 2:1240273/1‑205 (MQ=255) ccTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCg < 1:91304/203‑1 (MQ=255) ccTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCa < 2:810022/234‑1 (MQ=255) gtcgCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCt < 1:1118487/182‑1 (MQ=255) cgcgCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAg > 1:469707/1‑217 (MQ=255) gcgcACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGc > 1:84490/1‑234 (MQ=255) gcgcACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAAACGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTTGcc < 2:634180/235‑1 (MQ=255) gcACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGcacca < 2:1139442/198‑1 (MQ=255) cTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGcc < 1:473044/236‑1 (MQ=255) tCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATc < 2:1156859/203‑1 (MQ=255) aTCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGCGCACCACCACCg > 2:571193/1‑187 (MQ=255) aTCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCCACAGCAAGGCCTGGCGGTCACCGGAGAGCACCCCCACCGCCACCACCAGAATCACGAACAACTTGGCCAGCGcc > 1:66843/1‑222 (MQ=255) aTCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCGATGGATGATCGCCTGCTCCAGCGGCTCAGTGGCCATCGAAAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCg > 2:353704/1‑187 (MQ=255) gtCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACgaag < 2:821007/203‑1 (MQ=255) tgCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGgag < 2:902980/159‑1 (MQ=255) tgCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCCCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGccc > 2:886272/1‑162 (MQ=255) gCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTgg > 2:1129172/1‑198 (MQ=255) cGTCTGGTACAGCTGGAACGGCACATCGGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCa < 2:489550/185‑1 (MQ=255) gTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCCGTCACCg < 2:1285684/153‑1 (MQ=255) gTCTGGTACAGCCGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCg > 1:825761/1‑232 (MQ=255) cTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCACCTTg > 1:20303/1‑205 (MQ=255) ggTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAAtaca < 2:862409/212‑4 (MQ=255) gTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATtca < 2:84490/211‑1 (MQ=255) gTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgc < 1:621253/236‑1 (MQ=255) gTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgc < 1:685661/236‑1 (MQ=255) tACAGCTGGAACGGCACAGCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGCTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATtca < 2:655425/210‑1 (MQ=255) cAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgcgc < 1:1274768/235‑1 (MQ=255) tGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGAATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGAt < 1:672467/236‑1 (MQ=255) gAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTgg > 2:1024074/1‑130 (MQ=255) ccGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCCCTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAg < 1:423061/162‑1 (MQ=255) ggCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAgg > 1:1150650/1‑204 (MQ=255) ggCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAgg < 2:1150647/204‑1 (MQ=255) gCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCt > 2:613630/1‑186 (MQ=255) gCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCCGCATCGAGAACATGCGCTTGATCCCCGAc > 1:127657/1‑236 (MQ=255) tCTGACGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgc < 2:814977/217‑1 (MQ=255) cTGCCGCGGCAATCAGCAACAGCCCGGCTGACAGCCACAAGGCACTCCAGCCCCCCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgc < 1:340049/216‑1 (MQ=255) tGCCGCGGCAACCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATtcagtcag < 1:96505/195‑1 (MQ=255) cgcgGCAATCAGCAACAGCCCTGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgc < 2:968270/212‑1 (MQ=255) gCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGt < 2:1079977/229‑1 (MQ=255) cAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCCCCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGc < 1:78672/224‑1 (MQ=255) aCATCCACACGGCACTCCAGCCCACCACCGGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATtca < 2:1136389/161‑1 (MQ=255) aaGGCACTCCAGCCCACCACCTGCAAGCTACGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATgc < 1:609050/178‑1 (MQ=255) cccTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTgcagca < 2:779623/220‑1 (MQ=255) aCTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAAc < 1:496297/235‑1 (MQ=255) agcgcatgttctcgatgcaggccctgactgaattgctcaaggcgctggccaagttcttcgtgagtccggtggTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAgcg < 1:501584‑M1/61‑1 (MQ=255) cAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGGGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTg > 1:1051959/1‑135 (MQ=255) aGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCt > 1:550789/1‑199 (MQ=255) aGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGTCTGCAGCAAGCTGCCCggga > 1:383266/1‑228 (MQ=255) aGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAg > 1:1231388/1‑236 (MQ=255) cccACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGc < 1:784530/235‑1 (MQ=255) caccacCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGc < 1:757328/236‑1 (MQ=255) accaccTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCCCCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTGGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATccc > 1:175537/1‑173 (MQ=255) caccTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTgca > 1:1008151/1‑206 (MQ=255) accTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATtca < 2:1051956/135‑1 (MQ=255) tGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAgcgc < 1:675871/236‑1 (MQ=255) aGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATg > 1:903700/1‑236 (MQ=255) aGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCATGAGCAATTCAGTCAGGGCCTGCATc > 2:169916/1‑143 (MQ=255) tGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGgcgc > 1:499130/1‑236 (MQ=255) ggATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTgcagca < 2:819516/195‑1 (MQ=255) tgaattgctcaaggcgctggccaagttcttcgtgattctggtggTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGCTCATGCGGCTGAAGTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTaa < 1:1205330‑M1/175‑1 (MQ=255) gCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCt > 1:1254324/1‑181 (MQ=255) ccTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGCTCCCCGACAGCGGGTTCATGCGGCTGCAt > 2:13591/1‑173 (MQ=255) cTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCg > 2:865726/1‑42 (MQ=255) cTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGaa > 1:515518/1‑235 (MQ=255) cTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCCGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAAtt > 2:759449/1‑110 (MQ=255) gCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGa > 2:1281333/1‑168 (MQ=255) gCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAAcc > 1:1112581/1‑236 (MQ=255) aggcgctggccaagttcttcgtgattctggtggTGGCGGTCACCGGAGAGCACGACCACCGCCACCACCAGAATCACGAATAACTTGGCCAGCGCCTTGAGCACTTCAGTCAGGGCCTGCATCGAGAACATGCGCTTTATTCCCGACAGCg < 1:665389‑M1/118‑1 (MQ=255) ccAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCCCCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTGGATc > 1:236473/1‑140 (MQ=255) ccAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGACAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAAc < 2:706124/128‑1 (MQ=255) cTCATTGGCAATCGTCAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCt < 1:69688/128‑1 (MQ=255) tGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCaa > 1:504516/1‑169 (MQ=255) gACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAAtt > 2:229698/1‑85 (MQ=255) gACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCCGGGCCTGCATCGAGAACATGCACTTGATCCCCGACAGCgg > 2:1145972/1‑131 (MQ=255) gCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAACCACGAACAGCAGGATCAGCACCGGCTg < 1:1129175/235‑1 (MQ=255) gCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAACCACGAACAGCAGGATCAGCACCGGCTGCACCg < 1:779854/235‑1 (MQ=255) cTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAACCACGAACAGCAGGATCAGCACCGGCTGCa > 1:776901/1‑230 (MQ=255) cTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAACCACGAACAGCAGGATCAGCACCGGCTGCACCGcc > 1:479487/1‑235 (MQ=255) | AGTTGGCGAATACGTTGCTTGACTTCGGGCTTGCCCTCGCTGTCCTTGTACTCGTCGCGCACTTCCTGCTTGGTCATCTTCATTTTCTTGTGCGTCTGGTACAGCTGGAACGGCACATCTGCCGCGGCAATCAGCAACAGCCCGGCTGACATCCACAAGGCACTCCAGCCCACCACCTGCAAGCTATGGATGATCGCCTGCTCCAGCGGCTCATTGGCAATCGACAGCAAGGCCTGGCGGTCACCGGAGAGCACCACCACCGCCACCACCAGAATCACGAAGAACTTGGCCAGCGCCTTGAGCAATTCAGTCAGGGCCTGCATCGAGAACATGCGCTTGATCCCCGACAGCGGGTTCATGCGGCTGAATTTTGGCTGCAGCAAGCTGCCCGAGAACAGGAAGCCGCTAAGCGCGATGGGCGCCACGAAGGAAACCACGAACAGCAGGATCAGCACCGGCTGCACCGCC > AE015451/4945838‑4946305 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |