| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 4960421 = | 72 (1.050) | 3 (0.050) | 3/326 | NT | 4.1% | coding (50/1779 nt) | fliF | Flagellar M‑ring protein |
| ? | AE015451 | 4960435 = | 72 (1.090) | coding (36/1779 nt) | fliF | Flagellar M‑ring protein | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCGACGCCGCTCTTGCCGATTTCGAACGCGTTGGCCAGTTGGGTCGAGGCTTGCT > AE015451/4960207‑4960655 | gTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgg > 1:390916/1‑236 (MQ=255) cagcagCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg > 1:1117784/1‑236 (MQ=255) cagcagCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg > 1:511123/1‑236 (MQ=255) agcagcGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCgggg > 1:1067200/1‑235 (MQ=255) gcGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGtt > 1:1085107/1‑236 (MQ=255) cGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCg > 2:812493/1‑233 (MQ=255) tgtCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACt < 1:773110/236‑1 (MQ=255) tCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTg < 1:510095/235‑1 (MQ=255) ncccTGCTTGGGGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAg < 2:970304/234‑1 (MQ=255) ccATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTAc > 2:652054/1‑233 (MQ=255) gCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGCTGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCg > 2:102933/1‑173 (MQ=255) cccGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGGTCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACa < 1:937116/229‑1 (MQ=255) cccGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGc < 2:492664/218‑1 (MQ=255) cccGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTc > 1:714514/1‑235 (MQ=255) cAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGcc > 2:827996/1‑214 (MQ=255) ggCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAAc > 1:888801/1‑235 (MQ=255) gCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAAcc < 1:81978/235‑1 (MQ=255) gCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCg < 1:684940/236‑1 (MQ=255) gCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcg < 1:362622/193‑1 (MQ=255) tACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGATACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCa < 1:637983/232‑1 (MQ=255) aCAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCt < 2:1117781/234‑1 (MQ=255) aaCGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGc < 2:390913/234‑1 (MQ=255) acggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGc > 2:770130/1‑229 (MQ=255) acggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGc < 1:770133/229‑1 (MQ=255) cggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAAcc < 2:719946/219‑1 (MQ=255) ggTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcgac > 1:372165/1‑181 (MQ=255) cGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTAc > 1:742750/1‑236 (MQ=255) gggTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTAc < 1:815818/235‑1 (MQ=255) ttgttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCt > 1:965011/1‑236 (MQ=255) ttgCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGGCCTGGTACGCCTGGa > 1:206531/1‑236 (MQ=255) gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCCTCTGCatgat > 2:873461/1‑217 (MQ=255) gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGAc > 1:970211/1‑235 (MQ=255) gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGAc > 1:840942/1‑235 (MQ=255) gCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTGCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCg > 2:687062/1‑152 (MQ=255) gACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcga < 2:787668/163‑1 (MQ=255) gACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAg < 1:652057/236‑1 (MQ=255) acaGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTg > 2:583354/1‑205 (MQ=255) ccacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAAc < 2:1157731/190‑1 (MQ=255) cccGGCAAAGCCGATGGCCCCGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGt < 1:359852/233‑1 (MQ=255) cacGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGt < 1:1046578/235‑1 (MQ=255) cGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGt < 2:1067197/233‑1 (MQ=255) gCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCttg < 1:1071091/225‑1 (MQ=255) cAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTgg < 1:138153/236‑1 (MQ=255) aTGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTCTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCtcg > 2:66064/1‑108 (MQ=255) gCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCtt > 1:488552/1‑235 (MQ=255) cTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCAt < 2:714511/233‑1 (MQ=255) cTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGa > 1:730249/1‑236 (MQ=255) tGGCCGCCAGGCCGACCCGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGACGTTTTCCAGAAACGCCATGCCCAACAGCGGCGGCTTGGCCGCTGGCAAGCCa > 2:59244/1‑107 (MQ=255) tGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATc > 2:939328/1‑233 (MQ=255) gccgccAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGAATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGac < 1:329213/234‑1 (MQ=255) aGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAg < 2:347538/133‑1 (MQ=255) ccGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGc > 1:663047/1‑199 (MQ=255) cAGGAGGCCTATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCt < 2:660072/158‑1 (MQ=255) gaggCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATg < 2:892398/205‑1 (MQ=255) accacgcagatgcgggtttgaggacggatgtaccccatggctgaagcattcgtcgaaaacgcccccgccaaaGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCTACGACt > 2:541112‑M1/73‑111 (MQ=255) tCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGatcat > 1:467601/1‑235 (MQ=255) tGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCAc > 1:611598/1‑236 (MQ=255) gggCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCt < 1:39387/156‑1 (MQ=255) gcgcAGCACGGGCATCTGCGAGATGTTTTCCCGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCg < 2:679345/71‑1 (MQ=255) caTGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACgtcagtca < 1:812496/236‑1 (MQ=255) tGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGtcagtcag > 1:461339/1‑235 (MQ=255) gggCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTa > 2:1239357/1‑173 (MQ=255) aTCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCg > 2:671262/1‑234 (MQ=255) gagaTGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCtttt > 2:67802/1‑199 (MQ=255) agaTGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGat < 2:888798/208‑1 (MQ=255) aacccatggctgaagcagtcgtcgaaaacgcccccgccaaaGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCt > 1:719014‑M1/42‑141 (MQ=255) aacccatggctgaagcagtcgtcgaaaacgcccccgccaaaGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCt < 2:719011‑M1/100‑1 (MQ=255) ttttCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGGCCTCAAAACGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCttgttg > 1:276975/1‑153 (MQ=255) ttCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGCTACATCCGTCCTCAAACCGGCATCTCCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCAGGGTCATGGCTTGCATCGac < 2:639173/178‑1 (MQ=255) cGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCGACGCCGCTCTTGCCGAt > 1:1170408/1‑228 (MQ=255) cATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAACTTTGGCGGGGGCGTTTTCGACGACTGCTACAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGatcatc < 1:378394/193‑1 (MQ=255) aCAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCGTCAAACCGGCATCTGCATGATGTCCTGGTACGCCt < 2:1032038/117‑1 (MQ=255) cAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCa < 2:795398/61‑1 (MQ=255) gcggcgGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTcca > 2:150657/1‑46 (MQ=255) gcggcgGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGaa > 1:916537/1‑173 (MQ=255) gcggcgGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGaa < 2:916534/173‑1 (MQ=255) gcTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCGACGCCGCTCTTGCCGATTTCGAACGCGTTGGCCAGTTGGGTCGa < 1:754080/235‑1 (MQ=255) tGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGc > 2:1222007/1‑161 (MQ=255) gCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCGTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCGACGCCGCTCTTGCCGATTTCGAACGCGTTGGCCAGTTGGGTCGAgg < 1:67802/232‑1 (MQ=255) GCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCGACGCCGCTCTTGCCGATTTCGAACGCGTTGGCCAGTTGGGTCGAGGCTtgct > 2:611595‑M1/1‑235 (MQ=255) | GTCAGCAGCGGCCAGGGTGTCCATGACCTGCTTGGTGTCCATGCCCGACAGGCTGCCGTACAACGGACGGTAATCGGGTTGTTGCGACCACAGCACCACGGCAAAGCCGATGGCCACGCTGGCCGCCAGGCCGACCAGGAGGCCGATCTGGCGCAGCATGGGCATCTGCGAGATGTTTTCCAGAAACGCCATGCCAAACAGCGGCGGCTTGGCCGCTGGCGAGCCAGCTTTGGCGGGGGCGTTTTCGACGACTGCTTCAGCCATGGGTTACATCCGTCCTCAAACCGGCATCTGCATGATGTCCTGGTACGCCTGGACCAGCTTGTTGCGTACCTGGGTCATGGCTTGCATCGACACGCTGGCCTTTTGCGAAGCGATCATCACGTCAGTCAGGTCGACGCCGCTCTTGCCGATTTCGAACGCGTTGGCCAGTTGGGTCGAGGCTTGCT > AE015451/4960207‑4960655 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |