New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 4192478	73 (1.060)	4 (0.070)	4/298	NT	5.6%	intergenic (+84/‑565)	PP_5613/PP_5614	protein of unknown function/protein of unknown function
	?	AE015451	= 4192458	71 (1.170)					intergenic (+64/‑585)	PP_5613/PP_5614	protein of unknown function/protein of unknown function

ATTTGCTCCGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTTGAAAAGCT  >  AE015451/4192224‑4192686                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                     aTTTGCTCCGGACGCTCTGATTGCCCGTTACGTCTTTCTGCGTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAg                                                                                                                                                                                                                                      <  2:287569/235‑1 (MQ=255)   ttGCTCCGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCC                                                                                                                                                                                                                                   <  1:250947‑M1/236‑1 (MQ=255)                           gTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGTGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAAtt                                                                                                                                                                                                           <  1:899615/236‑1 (MQ=255)                               cGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATGGcc                                                                                                                                                                                                        >  1:407056/1‑235 (MQ=255)                                     tCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATg                                                                                                                                                                                                   <  2:780322/234‑1 (MQ=255)                                        gCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGccc                                                                                                                                                                                                       >  1:581583/1‑227 (MQ=255)                                        gCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCa                                                                                                                                                                                                <  1:730961/234‑1 (MQ=255)                                              aCGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCctgacctacgcaaggtgttttca                                                                                                                                                                                           <  2:409919‑M1/233‑24 (MQ=255)                                               cGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCtta                                                                                                                                                                                       >  2:879981/1‑235 (MQ=255)                                                     tCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGgca                                                                                                                                                                                                                 <  2:526819/204‑1 (MQ=255)                                                              gTCGCTTGTGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGcc                                                                                                                                                                                                        <  1:217756/204‑1 (MQ=255)                                                                 gcttgggcttggATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGt                                                                                                                                                                                                  >  2:1036261/1‑207 (MQ=255)                                                                 gcttgggcttggATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGGTCTTTTGGGTAGGTACCAAGtt                                                                                                                                                                      >  1:680389/1‑235 (MQ=255)                                                                       gcttggATCAGTACGAGTGTCCCGGCCTAGAGCCTTTTGACCCCGAACAGAATTCGCCAGATGACATTCACGCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCGCTGGTCtt                                                                                                                                                                                        >  2:1146744/1‑211 (MQ=255)                                                                        cttggATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAAtt                                                                                                                                                                                                           <  1:816228/191‑1 (MQ=255)                                                                             aTCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTccc                                                                                                                                                         <  1:537298/236‑1 (MQ=255)                                                                                   aCGAGTTTCCCGACCTAGAGCTTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTagc                                                                                                                                                     <  2:968356/234‑1 (MQ=255)                                                                                    cGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGc                                                                                                                                                                                                         >  1:1165184/1‑181 (MQ=255)                                                                                    cGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGc                                                                                                                                                                    >  2:583440/1‑218 (MQ=255)                                                                                         ctCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCACCAGATGACATTCACTCGCTCTTCTACACAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGt                                                                                                                                             <  1:190504/235‑1 (MQ=255)                                                                                             cGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGGCCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTagca                                                                                                                                                    <  1:532721/225‑1 (MQ=255)                                                                                               aCCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAAGCTTGTGAGAACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATc                                                                                                                                                                                          <  1:936215/185‑1 (MQ=255)                                                                                                    gagCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTc                                                                                                                                                                                                 >  2:1007738/1‑173 (MQ=255)                                                                                                    gagCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTc                                                                                                                                                                                                 <  1:1007741/173‑1 (MQ=255)                                                                                                    gagCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTg                                                                                                                                                                                     <  2:1002170/185‑1 (MQ=255)                                                                                                          tttGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGtt                                                                                                                             <  1:755280/235‑1 (MQ=255)                                                                                                            tGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGc                                                                                                                          >  1:177353/1‑236 (MQ=255)                                                                                                             gACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAACTACGCGTACGCTGAACACACCTTGCGTAGGTCAGGCCGCATCCATGGAAGCGgcagc                                                                                                                                                                                                               >  2:106821/1‑150 (MQ=255)                                                                                                                   gAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGtt                                                                                                                   <  1:895253/236‑1 (MQ=255)                                                                                                                   gAACAGTATCCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGcc                                                                                                                                 <  2:536231/222‑1 (MQ=255)                                                                                                                     aCAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGGAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAg                                                                                                                                                                        >  2:667538/1‑181 (MQ=255)                                                                                                                     aCAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCg                                                                                                                 >  1:354397/1‑236 (MQ=255)                                                                                                                         tATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCca                                                                                                              <  1:583443/235‑1 (MQ=255)                                                                                                                           ttCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCcaca                                                                                                            <  1:978757/235‑1 (MQ=255)                                                                                                                             cGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTg                                                                                                                                                                                     <  2:1225838/160‑1 (MQ=255)                                                                                                                                      aCATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAGAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGgc                                                                                                                                                                                                                                    <  2:632271‑M2/104‑3 (MQ=255)                                                                                                                                      aCATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCTCTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCgaag                                                                                                >  1:1214646/1‑236 (MQ=255)                                                                                                                                      aCATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCga                                                                                                  >  2:393045/1‑234 (MQ=255)                                                                                                                                        aTTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGC                                                                                                                                                                                                                     <  2:312127‑M1/117‑1 (MQ=255)                                                                                                                                           cACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGaaaa                                                                                                                                                              >  1:297906/1‑169 (MQ=255)                                                                                                                                             cTCGCTCTTCTACCCAACTGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACACTGAAAACACCTTGCGTAGGTCAGgccgcatccatggatgcggcctgacctacgcaaggtgttttcagcgtacgcttactttgacgc                                                                                                                                                                       >  1:907333‑M2/1‑95 (MQ=255)                                                                                                                                                gCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCctgacctacgcaaggtgttttcagcgtacgcttactttgacgctgggtctattggatgccgtgctcacaaca                                                                                                                                          >  2:624601‑M1/1‑112 (MQ=255)                                                                                                                                                 ctctTCTACCCAAATGGAATCTTGGGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCctgacctacgcaaggtgttttcagcgtacgcttactttgacgctgggtctattggatgccgtgctcacaagattc                                                                                                                                       <  1:883837‑M1/186‑76 (MQ=255)                                                                                                                                                    ttctACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCggcgggc                                                                                  >  1:651932/1‑236 (MQ=255)                                                                                                                                                       tACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTAcc                                                                                                                                                                           <  2:297905/144‑1 (MQ=255)                                                                                                                                                        aCCCAAATGGAGTCTTGTGAGCACGGCATCCAATAGACCCAGCGTCGAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTg                                                                               <  1:559529/235‑1 (MQ=255)                                                                                                                                                        aCCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGA‑CTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGACACATTTAGGTCGAAGAAc                                                                                             >  2:721057/1‑220 (MQ=255)                                                                                                                                                          ccAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTg                                                                               <  2:1213933/233‑1 (MQ=255)                                                                                                                                                                 gAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGgccgcatccatggatgcggcctgacctacgcaaggtgttttcagcgtacgcttactttgacgctgggtctattggatgccgtgctcccaagattccatttgggtagaagag                                                                                                                       <  1:883837‑M2/186‑112 (MQ=255)                                                                                                                                                                    tgttgtGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGgccgcatccatggatgcggcctgacctacgcaaggtgttttcagcgtacgcttactttgacgctgggtctattggatgccgtgctcacaagattccatttgggtagaagagc                                                                                                                      >  2:624601‑M2/3‑72 (MQ=255)                                                                                                                                                                    tCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTgcg                                                                                        <  1:599214/214‑1 (MQ=255)                                                                                                                                                                      ttGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCg                                                                                                                 >  2:154874/1‑187 (MQ=255)                                                                                                                                                                       tgtgAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGACAACTCCCTAGCAGCTTAGTGCCTGCGCTGCCAGTTGGCtt                                                                                                                        >  2:81661/1‑179 (MQ=255)                                                                                                                                                                          gAGCACGGCATCCAATAGAAACAGGCTCAAAGTAAGCGTACGCTGAAAACAGCTTGCCTAGGTCTGGCCGCTTCCATCGATGCGGCAGCAGTCGCCCGATGTCACTTATCTTTTGGGTAGATACCAAGTTGCTAAAAACTccc                                                                                                                                                         >  2:521615/1‑143 (MQ=255)                                                                                                                                                                                ggCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGAAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGcggcgg                                                                                    >  2:668812/1‑206 (MQ=255)                                                                                                                                                                                     ccAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGgcc                                                                                                                                                                                                                                   <  2:772339‑M2/58‑4 (MQ=255)                                                                                                                                                                                     ccAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGgcc                                                                                                                                                                                                                                   >  1:772342‑M2/1‑55 (MQ=255)                                                                                                                                                                                       aaTGGACCCAGCGTCAAAGTAAGCGTACGCTGAAAAGACCTTGAGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTg                                                                                                                                                                                     <  2:108640/102‑1 (MQ=255)                                                                                                                                                                                          aGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGccc                                                                                                                                                                                                       >  2:1216805/1‑81 (MQ=255)                                                                                                                                                                                            aCCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATg                                                                                                                                                                                                   <  2:95370/83‑1 (MQ=255)                                                                                                                                                                                               cAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCg                                                                                                                                                                                                      >  2:78309/1‑77 (MQ=255)                                                                                                                                                                                               cAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGcc                                                                           >  2:426700/1‑200 (MQ=255)                                                                                                                                                                                                aGCGTCAAAGTAAGCCTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCACCGATGGATGGGGCAGCAATTGCCCGATGTCa                                                                                                                                                                                                <  2:827062/82‑1 (MQ=255)                                                                                                                                                                                                 gCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCctgacctacgcaaggtgttttcagtgtacgcttactttgacgctgggtctattggatgccgtgctcacaagattccagttgggtagaagagcgag                                                                                                                   >  1:907333‑M1/1‑63 (MQ=255)                                                                                                                                                                                                 gCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCGATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAg                                                                                                                                              <  2:716769/131‑1 (MQ=255)                                                                                                                                                                                                 gCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAg                                                                                                                                              >  1:716772/1‑131 (MQ=255)                                                                                                                                                                                                  cgacAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTG‑CAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCa                                                                >  2:1250106/4‑207 (MQ=255)                                                                                                                                                                                                   gTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGtt                                                                                                                   >  1:1102038/1‑156 (MQ=255)                                                                                                                                                                                                   gTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGtt                                                                                                                   <  2:1102035/156‑1 (MQ=255)                                                                                                                                                                                                   gTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCt                                    >  1:960248/1‑235 (MQ=255)                                                                                                                                                                                                   gTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCt                                    >  1:898485/1‑235 (MQ=255)                                                                                                                                                                                                    tCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCACTTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGACAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAgccc                                                            >  2:69374/1‑208 (MQ=255)                                                                                                                                                                                                    tCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCt                                                                  >  1:1277771/1‑204 (MQ=255)                                                                                                                                                                                                    tCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAgcgc                                                            >  2:732451/1‑210 (MQ=255)                                                                                                                                                                                                    tCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCt                                    >  2:1205665/1‑234 (MQ=255)                                                                                                                                                                                                     cAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTgcggcg                                                                                     >  2:869012/1‑184 (MQ=255)                                                                                                                                                                                                     cAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACg                                 >  1:612645/1‑236 (MQ=255)                                                                                                                                                                                                          tAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCg                                       <  1:875287/225‑1 (MQ=255)                                                                                                                                                                                                            aGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCa                             <  2:960245/233‑1 (MQ=255)                                                                                                                                                                                                                     tGAAAACACCTTGCGTAGGTCAGgccgcatccatggatgcggcctgacctacgcaaggtgttttcagcgtacgcttactttgacgctgggtctattggatgccgtgctcacaagattccatttgggtagaagagcgagtgaatgtcatctggcgaatactgttcggggtcaaaaggctctaggtcgggaaactcgtactgatccaagcccaagcgaccagcttggatgaccgt                    <  2:409919‑M2/233‑211 (MQ=255)                                                                                                                                                                                                                     tGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGAc                  >  1:501597/1‑235 (MQ=255)                                                                                                                                                                                                                     tGAAAACACCTTCCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGa                                                                     <  1:1175017/184‑1 (MQ=255)                                                                                                                                                                                                                       aaaaCACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTAc               >  1:444760/1‑236 (MQ=255)                                                                                                                                                                                                                                tGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCa                                                                                                                                                                                                <  2:996744/50‑1 (MQ=255)                                                                                                                                                                                                                                tGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCa                                                                                                                                                                                                >  1:996747/1‑50 (MQ=255)                                                                                                                                                                                                                                  cGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCgaagatc                                                                                             >  1:1238896/1‑145 (MQ=255)                                                                                                                                                                                                                                    tAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTTGAAAAGCt  >  1:403823/1‑236 (MQ=255)                                                                                                                                                                                                                                       gTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGcgcg                                                           <  1:504916/176‑1 (MQ=255)                                                                                                                                                                                                                                           |                                                                                                                                                                                                                                     ATTTGCTCCGGACGCTCTGATTGCCCGTTACGTCTTTCTGCTTTAACGGTCATCCAAGCTGGTCGCTTGGGCTTGGATCAGTACGAGTTTCCCGACCTAGAGCCTTTTGACCCCGAACAGTATTCGCCAGATGACATTCACTCGCTCTTCTACCCAAATGGAATCTTGTGAGCACGGCATCCAATAGACCCAGCGTCAAAGTAAGCGTACGCTGAAAACACCTTGCGTAGGTCAGGCCGCATCCATGGATGCGGCAGCAATTGCCCGATGTCACTGATCTTTTGGGTAGGTACCAAGTTGCTGAAAACTCCCTAGCAGCTTAGTGCCTGCTCTGCCAGTTGGCTTTTGTTCGCCACATTTAGGTCGAAGAACTTGCGGCGGGCGTGGGCCATGCGAGCTCAGCGCGAGCTTGTGCCCGAAGGATCGGCTACGGCCAAGGCGTTGGACTACAGCTTGAAAAGCT  >  AE015451/4192224‑4192686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.