New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 5926174 =71 (1.030)3 (0.050) 3/324 NT 4.5% intergenic (‑30/+98) gcvT‑II/PP_5195 aminomethyltransferase/putative Iron ABC transporter, permease protein
?AE015451 5926228 = 59 (0.900)intergenic (‑84/+44) gcvT‑II/PP_5195 aminomethyltransferase/putative Iron ABC transporter, permease protein
Rejected: Frequency below/above cutoff threshold.

AAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGC  >  AE015451/5925997‑5926455
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                   
aaaCATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGa                                                                                                                                                                                                                                  <  1:866337/235‑1 (MQ=255)
         aGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGCCGTCAGCTTTTCTTGTTACTCACACCCGCcgcgcg                                                                                                                                                                                                                                   >  1:208882/1‑225 (MQ=255)
             gccgcAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTg                                                                                                                                                                                                                     >  1:65189/1‑235 (MQ=255)
                  aaTCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGcc                                                                                                                                                                                                                <  1:1165981/235‑1 (MQ=255)
                               cTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAAc                                                                                                                                                                                                  <  1:405189/236‑1 (MQ=255)
                                   tGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGAc                                                                                                                                                                                              <  1:865072/236‑1 (MQ=255)
                                    ggTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCCGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGAc                                                                                                                                                                                              <  1:599601/235‑1 (MQ=255)
                                      tGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTg                                                                                                                                                                                                <  1:1052779/231‑1 (MQ=255)
                                                    cGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGGGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCACGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACtgt                                                                                                                                                                               <  1:69076/234‑1 (MQ=255)
                                                        ccATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCgg                                                                                                                                                                         >  1:992443/1‑236 (MQ=255)
                                                             gTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCgcgc                                                                                                                                                                                                                         <  1:711732/183‑1 (MQ=255)
                                                                 aGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTc                                                                                                                                                                                                        <  2:799290/196‑1 (MQ=255)
                                                                      cATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCCCAGTGACTGTGACCgg                                                                                                                                                                         >  2:981712/1‑222 (MQ=255)
                                                                        tGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCa                                                                                                                                                                                                     >  1:78870/1‑192 (MQ=255)
                                                                         ctgctgccggtcatcggcctgattcgccgttcggcccgtcgacccggtcacagtcactgaggatgtcagtttgcgaccttgcggctacaatgcgcggcattcgcgcggcgggtgtgagtaacaagaaaagctgacgacccaacgtcatcgaccgccgcGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACa                                                                                                                                                                                             >  2:784372‑M2/159‑199 (MQ=255)
                                                                           cccAGCCACTGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGcc                                                                                                                                                                                                                >  1:1064423/1‑178 (MQ=255)
                                                                           cccAGCCACTGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGcc                                                                                                                                                                                                                <  2:1064420/178‑1 (MQ=255)
                                                                           cccAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATcc                                                                                                                                                                                          >  2:737451/1‑200 (MQ=255)
                                                                           cccAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATcc                                                                                                                                                                                          <  1:737454/200‑1 (MQ=255)
                                                                           cccAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGCGACTGGGACCGGGTc                                                                                                                                                                      >  1:138789/1‑220 (MQ=255)
                                                                                ccACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTc                                                                                                                                                                                        <  2:489141/197‑1 (MQ=255)
                                                                                ccACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTc                                                                                                                                                                                        >  1:489144/1‑197 (MQ=255)
                                                                                 ggtcatcggcctgattcgccgttcggcccgtcgacccggtcacagtcactgaggatgtcagtttgcgaccttgcggctacaatgcgcggcattcgcgcggcgggtgtgagtaacaagaaaagctgacgacccaacgtcatcgaccgccgcGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGt                                                                                                                                                                                     <  1:784375‑M2/49‑1 (MQ=255)
                                                                                  aCCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAg                                                                                                                                                >  1:412451/1‑235 (MQ=255)
                                                                                           gACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGcc                                                                                                                                                                                                                <  1:50302/162‑1 (MQ=255)
                                                                                           gACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGAcc                                                                                                                                      <  1:409682/236‑1 (MQ=255)
                                                                                           gACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGAc                                                                                                                                       >  1:666031/1‑235 (MQ=255)
                                                                                              cGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCgg                                                                                                                                    <  1:869538/235‑1 (MQ=255)
                                                                                              cGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCg                                                                                                                                     <  1:1160502/234‑1 (MQ=255)
                                                                                                tCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACt                                                                                                                                                                                 <  2:1164675/188‑1 (MQ=255)
                                                                                                   tGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGcagcag                                                                                                                              <  1:1009782/236‑1 (MQ=255)
                                                                                                                      cAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTg                                                                                                                                                                                                <  1:180541/151‑1 (MQ=255)
                                                                                                                       gtcacagtcactgaggatgtcagtttgcgaccttgcggctacaatgcgcggcattcgcGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACAt                                                                                                                                                                                            <  1:65085‑M1/96‑1 (MQ=255)
                                                                                                                         gTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGt                                                                                                        >  1:1180722/1‑236 (MQ=255)
                                                                                                                             tACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATcc                                                                                                                                                                                          <  2:507236/150‑1 (MQ=255)
                                                                                                                             tACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGGGGAGAAGGGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTg                                                                                                                                                                                    <  1:199338/156‑1 (MQ=255)
                                                                                                                                actgaggatgtcagtttgcgaccttgcggctacaatgcgcggcattcgcGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGAcc                                                                                                                                      <  1:784375‑M1/150‑1 (MQ=255)
                                                                                                                                aaaaGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGa                                                                                                                                           >  1:988365/1‑194 (MQ=255)
                                                                                                                                 aaaGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGCCATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAg                                                                                                         >  1:124825/1‑227 (MQ=255)
                                                                                                                                 aaaGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGt                                                                                                                                                                       <  2:758844/165‑1 (MQ=255)
                                                                                                                                 aaaGCGTGCGCTGACCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGt                                                                                                                                                                       >  1:758847/1‑165 (MQ=255)
                                                                                                                                     cGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCgg                                                                                                                                    <  2:992440/196‑1 (MQ=255)
                                                                                                                                      gggcgcTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGCCGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACAt                                                                                                                                                                                            <  2:42547/137‑1 (MQ=255)
                                                                                                                                       atgtcagtttgcgaccttgcggctacaatgcgcggcattcgcgcggcgggtgtgagtaacaagaaaagctgacgacccaacgtcatcgaccgccgcGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGAc                                                                                                                                                                            <  1:65085‑M2/58‑1 (MQ=255)
                                                                                                                                        tgtcagtttgcgaccttgcggctacaatgcgcggcattcgcGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGcagcag                                                                                                                              >  2:784372‑M1/42‑199 (MQ=255)
                                                                                                                                          gcTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGCATCAGGcc                                                                                                                                             >  1:1139567/1‑182 (MQ=255)
                                                                                                                                          gcTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGgcgc                                                                                        >  1:1270299/1‑235 (MQ=255)
                                                                                                                                          gcTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCAGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCGGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGgc                                                                                          >  2:684759/1‑233 (MQ=255)
                                                                                                                                                 cATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGcc                                                                                                                                             >  2:823567/1‑175 (MQ=255)
                                                                                                                                                    gggTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGgcagc                                                                                                                                <  2:1246629/185‑1 (MQ=255)
                                                                                                                                                           tcCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCg                                                                       >  1:951629/1‑235 (MQ=255)
                                                                                                                                                           tcCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCCAATCAGGCCGATGACCGGCAGCAGGCCCACCAATa                                                                                                                   >  2:1041827/1‑191 (MQ=255)
                                                                                                                                                            ccgtCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGc                                                                      <  1:808762/232‑1 (MQ=255)
                                                                                                                                                            ccTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACACACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGcc                                                                                                                                             >  2:1010136/1‑164 (MQ=255)
                                                                                                                                                             cTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGa                                                                                                                                                     >  1:487761/1‑155 (MQ=255)
                                                                                                                                                             cTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGa                                                                                                                                                     <  2:487758/155‑1 (MQ=255)
                                                                                                                                                             cTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTc                                                                              >  1:791363/1‑226 (MQ=255)
                                                                                                                                                                      gTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGgcagc                                                                                                                                <  1:41371/167‑1 (MQ=255)
                                                                                                                                                                      gTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAg                                                                                                >  1:4080/1‑199 (MQ=255)
                                                                                                                                                                         gCGAGGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGc                                                                                                      <  2:876730/190‑1 (MQ=255)
                                                                                                                                                                           gAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCt                                                                     >  1:2371/1‑221 (MQ=255)
                                                                                                                                                                                ggcggcggTCGTTGACGTTGGGTCGTCAGCTTTTCTTGTTACTCCCGCCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTCACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAg                                                                                                              <  2:1079877/175‑1 (MQ=255)
                                                                                                                                                                                             ggcGTTGGGTCGTCAGCTTTTCTTGTTACTCACCCCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAACCTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGAt                                                                                                                                          <  2:20530/132‑1 (MQ=255)
                                                                                                                                                                                             gACGTTGGGTCGTCAGCTTTTCTGGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACt                                                                               <  2:488043/193‑1 (MQ=255)
                                                                                                                                                                                              ccGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCa                                                                                                                <  2:573841/158‑1 (MQ=255)
                                                                                                                                                                                                             cTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCCGGTCATCTCGAACACCCGCAccg                                              >  1:298986/1‑208 (MQ=255)
                                                                                                                                                                                                                         cccacaCCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTg                                                                                                                                                                                                <  2:227850/50‑1 (MQ=255)
                                                                                                                                                                                                                         cTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGgcagc                                                                                                                                <  2:690985/116‑1 (MQ=255)
                                                                                                                                                                                                                             cgcccGACGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACggg                                                                                                                                                                <  2:295877/78‑1 (MQ=255)
                                                                                                                                                                                                                             cccccGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTg                                                                                                                                                                                                <  2:298232/46‑1 (MQ=255)
                                                                                                                                                                                                                              acCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCgg    <  1:833710/235‑1 (MQ=255)
                                                                                                                                                                                                                               cccGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGc                                                                                               >  1:94348/1‑143 (MQ=255)
                                                                                                                                                                                                                               cccGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCgg    <  1:414952/234‑1 (MQ=255)
                                                                                                                                                                                                                                ccgccgcGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCgg    <  2:1270296‑M2/226‑1 (MQ=255)
                                                                                                                                                                                                                                      cGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTg                                                                                                                                                                                                <  2:715613‑M2/38‑1 (MQ=255)
                                                                                                                                                                                                                                      cGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTg                                                                                                                                                                                                >  1:715616‑M2/2‑39 (MQ=255)
                                                                                                                                                                                                                                      cGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGc  >  1:327980‑M2/2‑229 (MQ=255)
                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                   
AAACATCGAAGACGCCGCAATCGCTGCGCACCTGATGGTGCTCCTCGACCTGCGAGCCATAGTGCAGGGGCATGTCCCAGCCACCGAAATCGACCGTCTTGGCGCCTAGCGCCAGGTGCAGGTCATACAAAAGCGTGCGCTGTCCCATGGGTTTCTCCTTCCGGGCGTGGCGAAGCGGCGGCGGTCGATGACGTTGGGTCGTCAGCTTTTCTTGTTACTCACACCCGCCGCGCGAATGCCGCGCATTGTAGCCGCAAGGTCGCAAACTGACATCCTCAGTGACTGTGACCGGGTCGACGGGCCGAACGGCGAATCAGGCCGATGACCGGCAGCAGGCCCACCAATACCAAGGTCAGTGCCGGCAGCGAGGCGCGCGCCCACTCGCCCTCGCTGGTCATCTCGAACACCCGCACGGCGAGGGTATCCCAGCCGAACGGCCGCATCAGCAACGTGGCGGGC  >  AE015451/5925997‑5926455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.