Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	AE015451	2095118	2095374	257	23 [22]	[21] 23	[alaA]	[alaA]

CCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGTTGCGCTGCTCCAGCAGGCGGCCCGGCGGCAGCACCAGGTCGTTGATGCTCTGGT  >  AE015451/2095253‑2095603                                                                                                                           |                                                                                                                                                                                                                                     cccccGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGa                                                                                                                                                                                >  2:667948/1‑177 (MQ=255)     cGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTcgtcgt                                                                                                                                                                    >  2:772700/1‑185 (MQ=255)         gAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGcccct                                                                                                             >  1:1185920/1‑234 (MQ=255)               tACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATcc                                                                                                                                      <  1:433217/205‑1 (MQ=255)               tACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATcc                                                                                                                                      >  2:433214/1‑205 (MQ=255)                              ttCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAgg                                                                                                                                                                                    >  2:611579/1‑144 (MQ=255)                                         gCCGCTCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCg                                                                                                                                               <  2:305681/170‑1 (MQ=255)                                         gCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCcgc                                                                                                                                    <  1:406036/181‑1 (MQ=255)                                         gCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCcgc                                                                                                                                    >  2:406033/1‑181 (MQ=255)                                                     ccttGCCGCTTCCAGGTCATCGACCCGCGGCACGGTCACCACTCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTcc                                                                                                                                                                                                                             >  2:158701/3‑80 (MQ=255)                                                     aaTTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAAc                                                                                                                              >  1:384239/1‑175 (MQ=255)                                                                          cACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGt                                                                             >  2:393308/1‑203 (MQ=255)                                                                                                    aGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGta                                                                               >  2:139761/1‑174 (MQ=255)                                                                                                     gTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTCGGTGCGGTTGCGCTGCTCCAGCAGGCGGCCcggc                              >  1:237535/1‑223 (MQ=255)                                                                                                           cggccacggccaGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCa                                                                       >  1:891338/1‑176 (MQ=255)                                                                                                           cggccacggccaGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGAGGTCGCTGAGCAGTTCGTAGGTGCGGTTgct                                                    >  1:217998/1‑194 (MQ=255)                                                                                                              ccacggccaGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGTTGCGCTGCTCCAGCAGGCGGCCCGGCGGCAGCACCAGGTCGTTGATg         >  1:791390/1‑235 (MQ=255)                                                                                                                    ccaGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGTTGCGCTGCTCCAGCAGGCGGCCCGGCGGCAGCACCAGGTCGTTGATGCTCTGGt  >  1:1057805/1‑236 (MQ=255)                                                                                                                     caGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCcgc                                                                                                                                    <  2:1232715/105‑1 (MQ=255)                                                                                                                     caGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCcgc                                                                                                                                    >  1:1232718/1‑105 (MQ=255)                                                                                                                      aGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTCGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGTTGCGCTGCTCCAGCAGGCGGCCCGGCGGCAGCACCAGGTCGTTGATGCTCTGGt  >  1:628962/1‑234 (MQ=255)                                                                                                                           aaCGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGtt                                                       >  2:1267408/1‑176 (MQ=255)                                                                                                                           aaCGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGtt                                                       <  1:1267411/176‑1 (MQ=255)                                                                                                                           |                                                                                                                                                                                                                                     CCCCCGTCGAACCCTACTGCGAATAACCCTTCAGGAAATTGCCGATCCGGCCAATTGCCGCTTCCAGGTCATCCACCCGCGGCAAGGTCACCACGCGGAAGTGGTCCGGCCACGGCCAGTTGAACGCCGTCCCTTGTACGATCAGCAGCTTCTCCGACAGCAGCAGGTCAAGGGCGAACTTCTCGTCGTTGAGGATCGGGCAAACCTTCGGGTCGATCCGCGGGAACGCATACAGCGCGCCCATCGGTTTCACGCAGCTGACGCCAGGGATGTCGTTGAGCAGTTCGTAGGTGCGGTTGCGCTGCTCCAGCAGGCGGCCCGGCGGCAGCACCAGGTCGTTGATGCTCTGGT  >  AE015451/2095253‑2095603

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑