New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	45668 =	39 (0.890)	3 (0.070)	3/318	NT	8.1%	intergenic (‑144/+59)	cadA‑I/PP_0042	cadmium translocating P‑type ATPase/conserved exported protein of unknown function
	?	AE015451	45693 =	32 (0.790)					intergenic (‑169/+34)	cadA‑I/PP_0042	cadmium translocating P‑type ATPase/conserved exported protein of unknown function

GCATGAAGATAGACGTTGCGAAATTCGTACGTCAGTCGCAGGACCCCCGTACCTGCCAGGTCTATCCACGGTTGATGACCTTCGAGGACTCCCAGGGCACGCTCAAGACTGTTCGTTACTCGATGTATTCGCAATGCATCAACAACAAGTAGTAAACGATTTGAACAGAACAATTAGAGAATTCATAAATGCCAGGCAGTGCCTGGCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/45878‑45668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctggcatttATGAATTCTCTAATTGTTCTGTTCAAATCGTTTACTACTTGTTGTTGATGCATTGCGAATACATCGAGTAACGAACAGTCTTGAGCGTGCCCTGGGAGTCCTCGAAGGTCATCAACCGTGGATAGACCTGGCAGGTACGGGGGTCCTGCGACTGACGTACGAATTTCGCAACGTCTATCTTCATGCCATATTTGTAATCCTGAATCTCTGGCATTGGCTTGCCATTTTTCTCCG  >  AE015451/45693‑45926                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCATGAAGATAGACGTTGCGAAATTCGTACGTCAGTCGCAGGACCCCCGTACCTGCCAGGTCTATCCACGGTTGATGACCTTCGAGGACTCCCAGGGCACGCTCAAGACTGTTCGTTACTCGATGTATTCGCAATGCATCAACAACAAGTAGTAAACGATTTGAACAGAACAATTAGAGAATTCATAAATGCCAGGCAGTGCCTGGCATT                                                                                                                                                                                                                                             >  2:294035/1‑210                                                                                CTTCGAGGACTCCCAGGGTACGCTCAAGACTGTTCGTTACTCGATGTATTCGCAATGCATCAACAACAAGTAGTAAACGATTTGAACAGAACAATTAGAGAATTCATAAATGCCAGGCAGTGCCTGGCATTTATGAATACTCTAATTGTTCTGTTCAAATCGTTTAC                                                                                                                                                                                                         <  1:193706/167‑1                                                                                                       TCAAGACTGTTCGTTACTCGATGTATTCGCAATGCATCAACAACAAGTAGTAAACGATTTGAACAGAACAATTAGAGAATTCATAAATGCCAGGCAGTGCCTGGCATTTATGAATTCTCTAATTGTTCTGTTCAAATCGTTTACTACTTGTTGTTGATGCATTGCG                                                                                                                                                                                   >  2:428954/1‑166                                                                                                       TCAAGACTGTTCGTTACGCGATGTATTCGCAATGCATAAACAACAAGTAGTAAACGATTTGAACAGAACAATTAGAGAATTCATACATGCCAGGCAGTGCCTGGCATTTATGAATTCTCTAATTGTTCTGTTCAAATCGTTTACTACTTGTTGTTGATGCATTGCG                                                                                                                                                                                   <  1:428956/166‑1                                                                                                                                                                                                                  TTATGAATTCTCTAATTGTTCTGTTCAAATCGTTTACTACTTGTTGTTGATGCATTGCGAATACATCGAGTAACGAACAGTCTTGAGCGTGCCCTGGGAGTCCTCGAAGGTCATCAACCGTGGATAGACCTGGCAGGTACGGGGGTCCTGCGACTGACGTACGAATTTCGCAACGTCTATCTTCATGCCATATTTGTAATCCTGAATCTCTGGCATTGGCTTGCCATTTTTCTCCG  >  1:414893/1‑236                                                                                                                                                                                                                                                                                                                                                                                                                                                               GCATGAAGATAGACGTTGCGAAATTCGTACGTCAGTCGCAGGACCCCCGTACCTGCCAGGTCTATCCACGGTTGATGACCTTCGAGGACTCCCAGGGCACGCTCAAGACTGTTCGTTACTCGATGTATTCGCAATGCATCAACAACAAGTAGTAAACGATTTGAACAGAACAATTAGAGAATTCATAAATGCCAGGCAGTGCCTGGCATTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/45878‑45668 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgcctggcatttATGAATTCTCTAATTGTTCTGTTCAAATCGTTTACTACTTGTTGTTGATGCATTGCGAATACATCGAGTAACGAACAGTCTTGAGCGTGCCCTGGGAGTCCTCGAAGGTCATCAACCGTGGATAGACCTGGCAGGTACGGGGGTCCTGCGACTGACGTACGAATTTCGCAACGTCTATCTTCATGCCATATTTGTAATCCTGAATCTCTGGCATTGGCTTGCCATTTTTCTCCG  >  AE015451/45693‑45926

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.