New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	207646 =	NA (NA)	3 (0.070)	3/326	NT	25.9%	coding (13152/26049 nt)	PP_0168	putative surface adhesion protein
	?	AE015451	207647 =	9 (0.210)					coding (13153/26049 nt)	PP_0168	putative surface adhesion protein

CCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGaccgaagg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/207876‑207646 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCGAAGGTGGCGAGATCACTTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGC  >  AE015451/207647‑207887                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCG                                                                                                                                                                                                                                               <  1:33816/235‑1             CCTTCAACGGTTGCTATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATTCACTGTGGTTGTTGATCGGCAGGGCGTCTTTGTTGGCCAGGGTGATGGTGTAAGTGATCTGTATACCTTCGATGACCGAAGG                                                                                                                                                                                                                                           <  2:489440/227‑1                           GATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGAC                                                                                                                                                                                                                                                 >  1:807781/1‑207                                                              AGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGG                                                                                                                                                                                                                                           <  1:331191/178‑1                                                                                          AGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGTGGCGAGATCACTTACACCATC                                                                                                                                                                                                                     <  2:539519/172‑1                                                                                                                                           ctaaggGTGAGGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGTGGCGAGATCACTTACACCATCACCC                                                                                                                                                                                                                 <  1:625197/121‑1                                                                                                                                                                                                         GATGGTGTAAGTGATCTCGCCACCTTCGGTGACCGAAGGTGGCGAGATCACTTACACCAGCACC                                                                                                                                                                                                                  >  2:59607/1‑64                                                                                                                                                                                                                                        ACCGAAGGTGGCGAGATCACTTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTT       <  1:310271/236‑1                                                                                                                                                                                                                                         CCGAAGGTGGCGAGATCACTTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTT       <  1:736276/235‑1                                                                                                                                                                                                                                           GAAGGTGGCGAGATCACTTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAACGGCACCGTGGGCACTGCCACCGTGACTGCCCCGGACAACGTCTACGTCGGCACCAACGCCCCTGT                                                    >  2:209791/1‑188                                                                                                                                                                                                                                             AGGTGGCGAGATCACTTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGC  <  1:509215/236‑1                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCGACATCCGCACCTTCAACGGTTGCGATCGATTTGATCACAGGGTCGTTGGTGCCAACGTAGACGTTGTCCGGGGCAGTCACGGTGGCAGTACCCACGGTGCCATTAGCCGGCACGGTGATGACGGTTTTGCCGTCGCTCAGCGTGAAGGTCAATGCACTGTGGTTGTTGATCGGCAGGCCGTCTTTGTTGGTCAGGGTGATGGTGTAAGTGATCTCGCCACCTTCGGTGaccgaagg‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  AE015451/207876‑207646 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ACCGAAGGTGGCGAGATCACTTACACCATCACCCTGACCAACAAAGACGGCCTGCCGATCAACAACCACAGTGCATTGACCTTCACGCTGAGCGACGGCAAAACCGTCATCACCGTGCCGGCTAATGGCACCGTGGGTACTGCCACCGTGACTGCCCCGGACAACGTCTACGTTGGCACCAACGACCCTGTGATCAAATCGATCGCAACCGTTGAAGGTGCGGATGTCGGCAAGTTCGAGC  >  AE015451/207647‑207887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.