New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1100206	42 (0.960)	3 (0.070)	3/328	NT	6.8%	coding (393/810 nt)	mlaF	phospholipid ABC transporter ATP‑binding subunit
	?	AE015451	= 1100209	42 (1.000)					coding (396/810 nt)	mlaF	phospholipid ABC transporter ATP‑binding subunit

GAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1100089‑1100206 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggccCACGGCCTGCAGCTTCATCAACACGATGTCACGGATCATTTCGTCCGACAGCTGAGTATGCACGCGCAACGGGAACGCGACGTTCTCGAACACATCGAGGTCGGTGAACAACGCGCCGCTCTGGAACAGCACGCCCATCTGCTTTCGGGCGTCGAACAGGTCGCTGCGCGACAGCGTCGGCAGGTTCTGCCCGGCAACCCATACCTCACCGCTCGAGGGGCGCAACT  <  AE015451/1100209‑1099983                                                                                                                                                                                                                                                                                                                                                           GAGCGGCGAGTTGTTCAGCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGG                                                                                                                                                                                                                                       <  2:67716/116‑1                                               TTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCCACGGCCTGCAGCTTCATCAACACGATGTCACGGATCATTTCGTCCGACAGCTGAGTATGCACGCGCAACGGGAACGCGACGTTCTCGAACACATCGAGGTCGGTGAACAACGCGCCGCTCTGGAACAGCACGCCCATCTGCT                                                                                      <  1:661620/215‑1                                                       GCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCCACGGCCTGCAGCTTCATCAACACGATGTCACGGATCATTTCGTCCGACAGCTGAGTATGCACGCGCAACGGGAACGCGACGTTCTCGAACACATCGAGGTCGGTGAACAACGCGCCGCTC                                                                                                            >  2:661618/1‑185                                                                                             ACATCGTGTTGATGAAGCTGCAGGCCCACGGCCTGCAGCTTCATCAACACGATGTCACGGATCATTTCGTCCGACAGCTGAGTATGCACGCGCAACGGGAACGCGACGTTCTCGAACACATCGAGGTCGGTGAACAACGCGCCGCTCTGGAACAGCACGCCCATCTGCTTTCGGGCGTCGAACAGGTCGC                                                                 >  1:772795/1‑190                                                                                                                 catGCCCACGGCCTGCAGCTTCATCAACACGATGTCACGGATCATTTCGGCCGACAGCTGAGTATGCACGCGCAACGGGAACGCGACGTTCTCGAACACATCGAGGTCGGTGAACAACGCGCCGCTCTGGAACAGCACGCCCATCTGCTTTCGGGCGTCGAACAGGTCGCTGCGCGACAGCGTCGGCAGGTTCTGCCCGGCAACCCATACCTCACCGCTCGAGGGGCGCAACT  <  2:360849/230‑1                                                                                                                                                                                                                                                                                                                                                           GAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/1100089‑1100206 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaggccCACGGCCTGCAGCTTCATCAACACGATGTCACGGATCATTTCGTCCGACAGCTGAGTATGCACGCGCAACGGGAACGCGACGTTCTCGAACACATCGAGGTCGGTGAACAACGCGCCGCTCTGGAACAGCACGCCCATCTGCTTTCGGGCGTCGAACAGGTCGCTGCGCGACAGCGTCGGCAGGTTCTGCCCGGCAACCCATACCTCACCGCTCGAGGGGCGCAACT  <  AE015451/1100209‑1099983

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.