New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1100206	42 (0.960)	3 (0.070)	3/328	NT	6.8%	coding (393/810 nt)	mlaF	phospholipid ABC transporter ATP‑binding subunit
	?	AE015451	= 1100209	42 (1.000)					coding (396/810 nt)	mlaF	phospholipid ABC transporter ATP‑binding subunit

AGTTGCGCCCCTCGAGCGGTGAGGTATGGGTTGCCGGGCAGAACCTGCCGACGCTGTCGCGCAGCGACCTGTTCGACGCCCGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCATGACCTGGCAGAAACTGCCA  >  AE015451/1099983‑1100441                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                         aGTTGCGCCCCTCGAGCGGTGAGGTATGGGTTGCCGGGCAGAACCTGCCGACGCTGTCGCGCAGCGACCTGTTCGACGCCCGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGCCGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGggcatg                                                                                                                                                                                                                                    <  2:360849‑M2/233‑7 (MQ=255)       gcCCCTCGAGCGGTGAGGTATGGGTTGCCGGGCAGAACCTGCCGACGCTGTCGCGCAGCGACCTGTTCGACGCCCGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGCTGAAGCTGCAGGCCGTGGGCCTGCGCGGTg                                                                                                                                                                                                                             >  2:348085/1‑234 (MQ=255)                                   cGGGCAGAACCTGCCGACGCTGTCGCGCAGCGACCTGTTCGACGCCCGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCg                                                                                                                                                                                               >  1:356432/1‑236 (MQ=255)                                                                gCGACCTGTTCGACGCCCGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGggcctgcagcttcatcaacacgatgt                                                                                                                                                                                                                >  1:772795‑M2/1‑164 (MQ=255)                                                                                ccGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATg                                                                                                                                                                                       >  1:267586/1‑199 (MQ=255)                                                                                     aGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGggcctgcagcttcatcaacacgatgtcacggatcatttcgtccgacagctgagtatgcacgcgcaacgggaa                                                                                                                                                                  <  1:661620‑M2/215‑73 (MQ=255)                                                                                      gCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCg                                                                                                                                             >  1:273911/1‑235 (MQ=255)                                                                                          aTGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGa                                                                                                                                         <  1:144409/235‑1 (MQ=255)                                                                                            gggCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGGTAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGcc                                                                                                                                                                                                                           <  2:14651/151‑1 (MQ=255)                                                                                             ggCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCt                                                                                                                                     >  1:736426/1‑236 (MQ=255)                                                                                                  gCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCa                                                                                                                                   >  2:282801/1‑233 (MQ=255)                                                                                                     gTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGc                                                                                                                                            <  2:356430/221‑1 (MQ=255)                                                                                                       gcccgagCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCt                                                                                                                                                                                                    <  2:267584/159‑1 (MQ=255)                                                                                                         cAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTacgac                                                                                                                           >  2:619169/1‑234 (MQ=255)                                                                                                           gagCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGggcctgcagcttcatcaacacgatgtcacggatcatttcgtccgacagctgagtatgcacgcgc                                                                                                                                                                          >  2:661618‑M2/1‑121 (MQ=255)                                                                                                               ggcgCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCt                                                                                                                                                    <  2:670631/203‑1 (MQ=255)                                                                                                                 cgcgTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTtc                                                                                                                  >  1:524678/1‑235 (MQ=255)                                                                                                                   cgTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGTGCGGTGCCATCGACCTGATGCCCGACGAGCTGt                                                                                                                                                                                                  >  2:421330/1‑153 (MQ=255)                                                                                                                   cgTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGTGCGGTGCCATCGACCTGATGCCCGACGAGCTGt                                                                                                                                                                                                  <  1:421332/153‑1 (MQ=255)                                                                                                                   cgTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGt                                                                                                                    >  1:421514/1‑231 (MQ=255)                                                                                                                                ccTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCg                                                                                                   <  1:282803/235‑1 (MQ=255)                                                                                                                                  tCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGc                                                                                                                                                       <  2:562059/181‑1 (MQ=255)                                                                                                                                     aTGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGc                                                                                              <  1:619171/235‑1 (MQ=255)                                                                                                                                      tgtgTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTCGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCAACGACCTGATGCCcgacga                                                                                                                                                                                                       <  2:525349/129‑1 (MQ=255)                                                                                                                                         gtTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGc                                                                                                                                                             <  2:647916/168‑1 (MQ=255)                                                                                                                                                       cgTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCGGCAGTTCCt                                                                                                                                     >  2:389503/1‑178 (MQ=255)                                                                                                                                                          tCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCGCATGTACGACGCACCGTTCGTCGGCCAGGAccc                                                                                                    >  2:210716/1‑208 (MQ=255)                                                                                                                                                                tGCGCGTGCATACCCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCTTCGGCCAGGACCCGATCGc                                                                                              <  1:406689/208‑1 (MQ=255)                                                                                                                                                                           aCTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTgc                                                                             >  2:600171/1‑214 (MQ=255)                                                                                                                                                                             tCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGAccc                                                                                                    <  2:703480/189‑1 (MQ=255)                                                                                                                                                                                    tCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTCCGACGAACCGTTCGTCGGCCCGGCCCCGATCGCCCTGGGGGGACtt                                                                                 >  2:260420/1‑200 (MQ=255)                                                                                                                                                                                    tCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTggg                                              >  1:12286/1‑236 (MQ=255)                                                                                                                                                                                    tCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGCGCCACCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCgt                                                                                                                                                                              >  2:253809/1‑108 (MQ=255)                                                                                                                                                                                       gACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGGTTGCCCTGGACCCGCAg                                                                                                                                          >  1:465440/1‑141 (MQ=255)                                                                                                                                                                                               gATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCAGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCa                                   <  1:430935/236‑1 (MQ=255)                                                                                                                                                                                                       aCATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCa                                                           <  1:719696/204‑1 (MQ=255)                                                                                                                                                                                                        cATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTgg                                               >  2:674392/1‑215 (MQ=255)                                                                                                                                                                                                         aTCGTGGTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGGCCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCg                                <  1:215057/229‑1 (MQ=255)                                                                                                                                                                                                            gggtTGATGAGGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGAtt                                                                     <  2:257941/187‑1 (MQ=255)                                                                                                                                                                                                             tgtTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCt                                                             >  2:411819/1‑196 (MQ=255)                                                                                                                                                                                                             tgtTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCAt                     <  1:600173/236‑1 (MQ=255)                                                                                                                                                                                                                tgatgaAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCAt                                                                                           >  1:259660/1‑163 (MQ=255)                                                                                                                                                                                                                          gCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCATGACCTGGCAGaaa        >  1:468655/1‑236 (MQ=255)                                                                                                                                                                                                                          gCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCATGACCTGGCAGaa         >  1:745158/1‑235 (MQ=255)                                                                                                                                                                                                                          gCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGCGTGGCGCTGGcc                                                                                                                                                                  >  2:115839/1‑82 (MQ=255)                                                                                                                                                                                                                           cAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATg                                                     <  1:711902/190‑1 (MQ=255)                                                                                                                                                                                                                               ccGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCATGACCTGGCAGAAACTGc    >  1:335021/1‑235 (MQ=255)                                                                                                                                                                                                                                cGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCATGACCTGGCAGAAACTGCCa  <  1:81106/236‑1 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                                                         AGTTGCGCCCCTCGAGCGGTGAGGTATGGGTTGCCGGGCAGAACCTGCCGACGCTGTCGCGCAGCGACCTGTTCGACGCCCGAAAGCAGATGGGCGTGCTGTTCCAGAGCGGCGCGTTGTTCACCGACCTCGATGTGTTCGAGAACGTCGCGTTCCCGTTGCGCGTGCATACTCAGCTGTCGGACGAAATGATCCGTGACATCGTGTTGATGAAGCTGCAGGCCGTGGGCCTGCGCGGTGCCATCGACCTGATGCCCGACGAGCTGTCCGGTGGCATGAAGCGCCGTGTGGCGCTGGCCCGGGCGATTGCCCTGGACCCGCAGATCCTCATGTACGACGAACCGTTCGTCGGCCAGGACCCGATCGCCATGGGGGTACTGGTGCGCCTGATTCGCCTGCTCAACGATGCCCTGGGCATCACCAGCATCGTGGTTTCCCATGACCTGGCAGAAACTGCCA  >  AE015451/1099983‑1100441

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.