New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? AE015451 = 241512734 (0.780)3 (0.070) 3/314 NT 9.1% coding (106/243 nt) tusA‑II sulfurtransferase
?AE015451 = 2415113 29 (0.720)coding (92/243 nt) tusA‑II sulfurtransferase

TCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2414894‑2415127
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgccggcggccAGGTTGCGTACGTGCTGGTGCAGCATCATCACCGGTTCCGGGCAGTTCAGGCCGGTGGCATCGAGGATGGCGTCGGGGGTGAAATCGGTCATGGG  <  AE015451/2415113‑2415019
                                                                                                                                                                                                                                                                                                                                         
TCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCACCCTGGCCG                                                                                                          >  1:457298/1‑225
                                        GATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGG                                                                                                      <  2:298090/189‑1
                                                                                                          GCGATCCTTTTCGGCGCCCCCCATGACCGATTTCCCCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGACCCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGC                                                                                                     <  2:248323/124‑1
                                                                                                                             CCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCAGGTTGCGTACGTGCTGGTGCAGCATCATCACCGGTTCCGGGCAGTTCAGGCCGGTGG                                       >  1:491891/1‑167
                                                                                                                             CCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGC                                                                                                            >  1:326554/1‑98
                                                                                                                                           CACCCCCGCCGCCACCCTCGAGGCAACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCAGGTTGCGTACGTGCTGGTGCAGCATCATCACCGGTTCCGGGCAGTTCAGGCCG                                           <  1:693492/149‑1
                                                                                                                                                                                                                   ACGCAACCTGGCCGCCGGCGGCCAGGTTGCGTACGTGCTGGTGCAGCATCATCACCGGTTCCGGGCAGTTCAGGCCGGTGGCATCGAGGATGGCGTCGGGGGTGAAATCGGTCATGG   >  2:559051/1‑117
                                                                                                                                                                                                                                       GCCAGGTTGCGTACGTGCTGGTGCAGCATCATCACCGGTTCCGGGCAGTTCAGGCCGGTGGCATCGAGGATGGCGTCGGGGGTGAAATCGGTCATGGG  >  2:326552/1‑98
                                                                                                                                                                                                                                                                                                                                         
TCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2414894‑2415127
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgccggcggccAGGTTGCGTACGTGCTGGTGCAGCATCATCACCGGTTCCGGGCAGTTCAGGCCGGTGGCATCGAGGATGGCGTCGGGGGTGAAATCGGTCATGGG  <  AE015451/2415113‑2415019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.