New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2415127	34 (0.780)	3 (0.070)	3/314	NT	9.1%	coding (106/243 nt)	tusA‑II	sulfurtransferase
	?	AE015451	= 2415113	29 (0.720)					coding (92/243 nt)	tusA‑II	sulfurtransferase

TCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAG  >  AE015451/2414894‑2415320                                                                                                                                                                                                                            |                                                                                                                                                                                                                tcaagatcaagatcaagatcaagatcGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCACCCTGGCCG                                                                                                                                                                                                            >  1:457298‑M1/1‑225 (MQ=255)                                         gatcgagatcaagaGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGG                                                                                                                                                                                                        <  2:298090‑M1/189‑1 (MQ=255)                                                 tcaagaGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACccgccg                                                                                                                                                              <  2:554420/223‑1 (MQ=255)                                                      agCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAg                                                                                                                                                                                           >  2:450270/1‑189 (MQ=255)                                                             ggTTTGAAAGCCTGGCTTGGCCCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACtt                                                                                                                                      <  1:710382/235‑1 (MQ=255)                                                                                                         tAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCaa                                                                                                          <  1:285898/219‑1 (MQ=255)                                                                                                           gCGATCCTTTTCGGCGCCCCCCATGACCGATTTCCCCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGACCCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGC                                                                                                                                                                                                       <  2:248323‑M1/124‑1 (MQ=255)                                                                                                            cGAGCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCCGCACGTACGCAACCt                                                                                                                                                                                                                 >  2:82660/1‑113 (MQ=255)                                                                                                                   tttCGGAGCCCCCCATGACCGATTTCACCCCCGACCCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAgctgct                                                                                                                    <  1:765156/199‑1 (MQ=255)                                                                                                                       ggAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCt                                                                                      <  1:334804/225‑1 (MQ=255)                                                                                                                              cccATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTggc                                                                                                                                                                                                              >  2:326552‑M2/1‑95 (MQ=255)                                                                                                                              cccATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCaggttgcgtacgtgctggtgcagcatcatcaccggttccgggcagttcaggccggtgg                                                                                                                                         >  1:491891‑M1/1‑109 (MQ=255)                                                                                                                              cccATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGC                                                                                                                                                                                                              >  1:326554‑M1/1‑98 (MQ=255)                                                                                                                               ccATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTggccgccggcggccaggttgcgt                                                                                                                                                                                          >  2:559051‑M2/1‑94 (MQ=255)                                                                                                                                   gACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACccgccg                                                                                                                                                                      >  1:190469/1‑133 (MQ=255)                                                                                                                                     ccGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCGGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTgg                                                                               <  1:70597/218‑1 (MQ=255)                                                                                                                                     ccGATTTCACCCCCGACGCCATCCACGATGCCACCGGCCTGAACTGCCCGGACCCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCg                                                                                                <  1:348274/201‑1 (MQ=255)                                                                                                                                          ttCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCg                                                                                                >  2:806136/1‑196 (MQ=255)                                                                                                                                          ttCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCg                                                                                                <  1:806138/196‑1 (MQ=255)                                                                                                                                            cACCCCCGCCGCCACCCTCGAGGCAACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCaggttgcgtacgtgctggtgcagcatcatcaccggttccgggcagttcaggccg                                                                                                                                             <  1:693492‑M1/149‑55 (MQ=255)                                                                                                                                                    aCGCCATCCGCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCg                                                                                                <  1:51350/186‑1 (MQ=255)                                                                                                                                                      gCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATc                                                                                                                                                       <  2:597611/129‑1 (MQ=255)                                                                                                                                                      gCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATc                                                                                                                                                       >  1:597613/1‑129 (MQ=255)                                                                                                                                                             tCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCgg                                     <  1:316723/236‑1 (MQ=255)                                                                                                                                                                   ccACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTggccgccggcggccaggttgcgtacgtgctggtgcagcatcatcaccggttccgggcagttcaggccggtggcatcgaggatggcgtcgggggtgaaatcggtcatggg                                                                                                    >  1:491891‑M2/1‑58 (MQ=255)                                                                                                                                                                       cGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTggccgccggcggccaggttgcgtacgtgctggtgcagcatcatcaccggttccgggcagttcaggccggttgcctcgagggtggcggcgggggtg                                                                                                                  <  1:693492‑M2/149‑96 (MQ=255)                                                                                                                                                                       cGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTgcagc                                                                                                               >  2:731439/1‑152 (MQ=255)                                                                                                                                                                        ggCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCg                                                                                                <  2:385951/166‑1 (MQ=255)                                                                                                                                                                         gCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAg                                                                  >  1:322998/1‑195 (MQ=255)                                                                                                                                                                                      ggAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTccc              >  2:689854/1‑234 (MQ=255)                                                                                                                                                                                           cGGTGATGATGCTGCACCAGCACGTACACAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGGCCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCTCGCGTTGCGCCTACAACGCGCTCCCCAGAccg       >  1:760629/1‑234 (MQ=255)                                                                                                                                                                                                atgatgCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCg                                                               >  1:50329/1‑175 (MQ=255)                                                                                                                                                                                                atgatgCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTgcg                              >  2:358969/1‑208 (MQ=255)                                                                                                                                                                                                atgatgCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGagag  <  1:450272/236‑1 (MQ=255)                                                                                                                                                                                                    ggctgcACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTgg                                                <  1:16642/185‑1 (MQ=255)                                                                                                                                                                                                             aGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCgg                                     <  1:752734/188‑1 (MQ=255)                                                                                                                                                                                                              gCACGTACGCAACCTGGCCGCCGGCCGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGc                                                                         <  1:537425/151‑1 (MQ=255)                                                                                                                                                                                                                  gTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGCCATCGCCACCGACCCGCCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTc                                                                                                                                     >  2:159656/1‑87 (MQ=255)                                                                                                                                                                                                                    aCGCAACCTGGCCGCCGGCGGCCaggttgcgtacgtgctggtgcagcatcatcaccggttccgggcagttcaggccggtggcatcgaggatggcgtcgggggtgaaatcggtcatgg                                                                                                     >  2:559051‑M1/1‑23 (MQ=255)                                                                                                                                                                                                                     cGCAACCTGCCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCgg                                     <  2:380330/180‑1 (MQ=255)                                                                                                                                                                                                                       cAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACt                      <  2:798541/193‑1 (MQ=255)                                                                                                                                                                                                                            |                                                                                                                                                                                                                TCAAGATCAAGATCAAGATCAAGATCGAGATCAAGATCAAGATCGAGATCAAGAGCGCTGGGTTTGAAAGCCGTGCTTGGACCGCGTCGCGCTATGCGCGACAATAGCGATCATTTTCGGAGCCCCCCATGACCGATTTCACCCCCGACGCCATCCTCGATGCCACCGGCCTGAACTGCCCGGAACCGGTGATGATGCTGCACCAGCACGTACGCAACCTGGCCGCCGGCGGCCTGCTCAAGGTCATCGCCACCGACCCGTCGACCCGCCGCGACATCCCCAAGTTCTGCAACTTCCTGGGCCACGAGCTGCTGCAGCAGCAAGAGGACGCCGGCACTTTCCTGTACTGGATCCGCAAGAAAGCCGACTGAATCGCTCTGGAACACGCCCGGCGTTGCGCCTACACTGCGCTCCCCAGACAGGAGAG  >  AE015451/2414894‑2415320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.