New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 2711308	50 (1.140)	4 (0.100)	3/322	NT	7.2%	intergenic (‑55/+88)	PP_2374/metH	conserved protein of unknown function/cobalamin‑dependent methionine synthase
	?	AE015451	= 2711370	56 (1.360)					intergenic (‑117/+26)	PP_2374/metH	conserved protein of unknown function/cobalamin‑dependent methionine synthase
Rejected: Coverage evenness skew score above cutoff.

TTTGCCGCTTTGCACGCCGAAGGCGGCAGCGAGGATGCTGTGCAGCATCTGCCAGAAGGTCGGGGGTTTGCCCTGGCTGGAATCGTCCATGGTGGCTCCTGGGGAAATCAGAGGCAATCAGGGACAGTGTAGGCAATGGTTGTGAGGTTGCCCGTACCGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2711137‑2711308 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgcgggCTTGCCCACACAGGTATGACACAGCCCTCAAGGGCAGTCATTTACCTGTTGGAACGGGTTTCCCCGCGAAGAGGCCGGTACGGGCAACCTCACAACCATTGCCTACACTGTCCCTGATTGCCTCTGATTTCCCCAGGAGCCACCATGGACGATTCCAGCCAGGGC  <  AE015451/2711370‑2711206                                                                                                                                                                                                                                                                                                                                                   TTTGCCGCTTTGCACGCCGAAGGCGGCAGCGAGGATGCTGTGCAGCATCTGCCAGAAGGTCGGGGGTTTGCCCTGGCTGGAATCGTCCATGGTGGCTCCTGGGGAAATCAGAGGCAATCAGGGACAGTGTAGGCAATGGTTGTGAGGTTGCCCGTACCGGCCTC                                                                                                                                                                               <  2:327923/164‑1                                                                         CTGGCTGGAATCGTCCATGGTGGCTCCTGGGGAAATCATAGGCAATCAGGGACAGTGTAGGCAATGGTTGTGAGGTTGCCCGTACCGGCCTCTTCGCGGGCTTGCCCACACAGGTATGACACAGCCCTCAAGGGCAGTCATTTACCTGTTGGAACGGGTTTCCCCGC                                                                                                    >  1:6716/1‑167                                                                         CTGGCTGGAATCGTCCATGGTGGCTCCTGGGGAAATCATAGGCAATCAGGGACAGTGTAGGCAATGGTTGTGAGGTTGCCCGTACCGGCCTCTTCGCGGGCTTGCCCACACAGGTATGACACAGCCCTCAAGGGCAGTCATTTACCTGTTGGAACGGGTTTCCCCGC                                                                                                    <  2:6716/167‑1                                                                                                       GGAAATCAGAGGCAATCAGGGACAGTGTAGGCAATGGTTGTGAGGTTGCCCGTACCGGCCTCTTCGCGGGCTTGCCCACACAGGTATGACACAGCCCTCAAGGGCAGTCATTTACCTGTTGTAACGGGTTTCCCCGCaccgagc                                                                                             >  2:511134/1‑137                                                                                                                                                            ACCGGCCTCTTCGCGGGCTTGCCC                                                                                                                                                                >  2:386570/1‑24                                                                                                                                                                            GCTTGCCCACACAGGTATGACACAGCCCTCAAGGGCAGTCATTTACCTGTTGGAACGGGTTTCCCCGCGAAGAGGCCGGTACGGGCAACCTCACAACCATTGCCTACACTGTCCCTGATTGCCTCTGATTTCCCCAGGAGCCACCATGGACGATTCCAGCCAGGGC  <  2:501789/166‑1                                                                                                                                                                                                                                                                                                                                                   TTTGCCGCTTTGCACGCCGAAGGCGGCAGCGAGGATGCTGTGCAGCATCTGCCAGAAGGTCGGGGGTTTGCCCTGGCTGGAATCGTCCATGGTGGCTCCTGGGGAAATCAGAGGCAATCAGGGACAGTGTAGGCAATGGTTGTGAGGTTGCCCGTACCGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  AE015451/2711137‑2711308 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgcgggCTTGCCCACACAGGTATGACACAGCCCTCAAGGGCAGTCATTTACCTGTTGGAACGGGTTTCCCCGCGAAGAGGCCGGTACGGGCAACCTCACAACCATTGCCTACACTGTCCCTGATTGCCTCTGATTTCCCCAGGAGCCACCATGGACGATTCCAGCCAGGGC  <  AE015451/2711370‑2711206

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.