| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | 3959738 = | 33 (0.760) | 4 (0.100) | 4/326 | NT | 11.7% | coding (647/5844 nt) | mnxG | manganese‑oxidizing multicopper oxidase |
| ? | AE015451 | 3959775 = | 29 (0.700) | coding (610/5844 nt) | mnxG | manganese‑oxidizing multicopper oxidase | |||||
GAAAACGAAGGCGGCGAGGGCTTTGTCGCCGACGAGCAGGTGGCCGAGCGCATGGTCGGCTTCCAGGTCAACGGGATGCAGGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3959967‑3959738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcgaAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGC > AE015451/3959775‑3959886 GAAAACGAAGGCGGCGAGGGCTTTGTCGCCGACGAGCAGGTGGCCGAGCGCATGGTCGGCTTCCAGGTCAACGGGATGCAGGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGAAGGCC < 1:102842/235‑1 CGCATGGTCGGCTTCCAGGTCAACGGGATGCAGGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGG < 2:507432/230‑1 CATGGTCGGCTTCCAGGTCAACGGGATGCAGGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGA < 2:279879/180‑1 GGGATGCAGGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCCACGTTCGGCGG > 2:77253/1‑155 GGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGAGGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCG < 1:383231/187‑1 GCAGCACCCGCAGCTCCACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGGTCGGCGGCGAAGGCCCCTTCGCG < 1:86589/95‑1 AGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGC > 1:37716/1‑130 TCGCCGCCACCAGCAAAGCCGCTACGTTCG > 2:132536/1‑30 CGAAGGCCCCTTCGCGCTCGGCATACAGGGGGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGCATAGGCGGTAATAGCGGCAATGCTGTTCACCGC > 2:146745/1‑115 GAAAACGAAGGCGGCGAGGGCTTTGTCGCCGACGAGCAGGTGGCCGAGCGCATGGTCGGCTTCCAGGTCAACGGGATGCAGGCGGTGAACAGCATTGCCGATATTTCCGCCTATACCGGGCGTAACGGCAACTTCTTCGTCAGCCCCGGCAGCACCCGCAGCTACACCCTGTATGCCGAGCGCGAAGGGGCCTTCGCCGCCACCAGCAAAGCCGCTACGTTCGGCGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < AE015451/3959967‑3959738‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcggcgaAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGC > AE015451/3959775‑3959886 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |