New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	3959738 =	33 (0.760)	4 (0.100)	4/326	NT	11.7%	coding (647/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase
	?	AE015451	3959775 =	29 (0.700)					coding (610/5844 nt)	mnxG	manganese‑oxidizing multicopper oxidase

GCCTTCGGCGATCCACGGTTCGACCTGCGGATAACGGGCTTCGTAGTCGATCACGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGCCCCTCTTCCTCACCCTCAGGCTG  >  AE015451/3959545‑3960000                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                  gaaaacgaaggcggcgagggctttgtcgccgacgagcaggtggccgagcgcatggtcggcttccaggtcaacgggatgcaggcggtgaacagcattgccgatatttccgcctataccgggcgtaacggcaacttcttcgtcagccccggcagcacccgcagctacaccctgtatgccgagcgcgaaggggccttcgccgccaccagcaaagccgctacgttcggcggcgaAGGcc                                                                                                                                                                                                                               <  1:102842‑M2/5‑1 (MQ=255)                      gACCTGCGGATAACGGGCTTCGTAGTCGATCACGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAGGGcacggcg                                                                                                                                                                                                                          <  2:477044/219‑7 (MQ=255)                               aTAACGGGCTTCGTAGTCGATCACGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGc                                                                                                                                                                                                <  1:467598/236‑1 (MQ=255)                                         tCGTAGTCGATCACGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCCTACAGGgtgt                                                                                                                                                                                                      >  2:378439/1‑220 (MQ=255)                                               tCGATCACGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGCGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTcg                                                                                                                                                                                                                         <  2:458463/195‑1 (MQ=255)                                                 cgcatggtcggcttccaggtcaacgggatgcaggcggtgaacagcattgccgatatttccgcctataccgggcgtaacggcaacttcttcgtcagccccggcagcacccgcagctacaccctgtatgccgagcgcgaaggggccttcgccgccaccagcaaagccgctacgttcggcggcgaAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCgg                                                                                                                                                                                    <  2:507432‑M2/48‑1 (MQ=255)                                                      cGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTcgc                                                                                                                                                                                                                        <  1:560997/189‑1 (MQ=255)                                                            ggCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGCGACGTTGCCCGCCGTGCCCTCGCCGCCGCACGTAGCAGCTTTGCTGGTGGCAGCGAAGGCCCCTTCGCGCTCGGCa                                                                                                                                                                                                                >  2:449774/1‑191 (MQ=255)                                                                ggTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTc                                                                                                                                                                                                                          <  1:629142/177‑1 (MQ=255)                                                                ggTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTc                                                                                                                                                                                                                          >  2:629140/1‑177 (MQ=255)                                                                ggTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGt                                                                                                                                                               >  1:514019/1‑236 (MQ=255)                                                                                 ggcggtgaacagcattgccgatatttccgcctataccgggcgtaacggcaacttcttcgtcagccccggcagcacccgcagctacaccctgtatgccgagcgcgaaggggccttcgccgccaccagcaaagccgctacgttcggcggcgaGGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCg                                                                                                                                                                                               <  1:383231‑M2/37‑1 (MQ=255)                                                                                                             gcctataccgggcgtaacggcaacttcttcgtcagccccggcagcacccgcagctacaccctgtatgccgagcgcgaaggggcctTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCt                                                                                                                                                                                                                            >  1:37716‑M1/86‑130 (MQ=255)                                                                                                              aGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCa                                                                                                                        <  2:580800/229‑1 (MQ=255)                                                                                                                   gtTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGCACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGAAGCGGCTTTGCTGGTGGCGGCGAAGGACCCTTCGCCCt                                                                                                                                                                                                                     >  2:245474/1‑131 (MQ=255)                                                                                                                   gtTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACCggg                                                                                                                                                                                                         >  2:201170/1‑143 (MQ=255)                                                                                                                       cGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACgaagaa                                                                                                                                                                       >  1:77254/1‑173 (MQ=255)                                                                                                                                         ttGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCAt                                                                                      >  1:368959/1‑236 (MQ=255)                                                                                                                                                  ccggcagcacccgcagctacaccctgtatgccgagcgcgaaggggcctTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATgcg                                                                                   <  2:507432‑M1/182‑1 (MQ=255)                                                                                                                                                     gcagcacccgcagctccaccctgtatgccgagcgcgaaggggccttcgccgccaccagcaaagccgctacggtcggcggcgaAGGCCCCTTcgcg                                                                                                                                                                                                                       <  1:86589‑M2/13‑1 (MQ=255)                                                                                                                                                           gggCCGAACAGGCCGTTGGAGACGTTGCCCGCCGGGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATAc                                                                                                                                                                                                             <  2:63086/98‑1 (MQ=255)                                                                                                                                                             gCCGAACAGGCGGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTcgcg                                                                                                                                                                                                                       <  1:245980/87‑1 (MQ=255)                                                                                                                                                             cgcagctacaccctgtatgccgagcgcgaaggggcccTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGcc                                                                                                                   <  1:383231‑M1/150‑1 (MQ=255)                                                                                                                                                                gAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCgg                                                               >  1:236912/1‑236 (MQ=255)                                                                                                                                                                  ccAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCTCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCa                                                                                       <  2:545434/209‑1 (MQ=255)                                                                                                                                                                    aGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAGGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGAc                                                                                         >  2:731908/1‑206 (MQ=255)                                                                                                                                                                    aGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACTTGCTCGTCGGc                                                              >  1:340934/1‑233 (MQ=255)                                                                                                                                                                      gCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGa                                                            <  2:619781/233‑1 (MQ=255)                                                                                                                                                                                   ttGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCg                                                                                                                                                       <  1:195107/129‑1 (MQ=255)                                                                                                                                                                                    ggCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCACCTTCGCGGTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATcc                                                                                                            <  1:25556/170‑1 (MQ=255)                                                                                                                                                                                     gCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCt                                           >  1:287396/1‑235 (MQ=255)                                                                                                                                                                                     cgcgaaggggcctTCGCCGCCGACCGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGGAGCTGCGGGtgctgc                                                                                                                                                                                       <  1:86589‑M1/82‑1 (MQ=255)                                                                                                                                                                                      cccGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGc                                                                                                                                                                                                                 <  2:96404/68‑1 (MQ=255)                                                                                                                                                                                          aggggccttcgccgccaccagcaaagccgctacgttcggcggcgaAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGc                                                                                                                                               >  1:37716‑M2/46‑130 (MQ=255)                                                                                                                                                                                             ggcctTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTc                                   <  1:102842‑M1/230‑1 (MQ=255)                                                                                                                                                                                                 cTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGcc                                                                                                                                                                 <  1:99096/105‑1 (MQ=255)                                                                                                                                                                                                  TCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATg                                                                                     <  2:279879‑M1/180‑1 (MQ=255)                                                                                                                                                                                                     CCGCCGAACGTGGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATccc                                                                                                           >  2:77253‑M1/1‑155 (MQ=255)                                                                                                                                                                                                           aaCGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGcccc                      >  2:310830/1‑234 (MQ=255)                                                                                                                                                                                                             cGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGCCCCTCtt                  <  1:623603/236‑1 (MQ=255)                                                                                                                                                                                                             cGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGCCCCTCtt                  <  1:310832/236‑1 (MQ=255)                                                                                                                                                                                                              gTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGCCCCTCtt                  <  1:507434/235‑1 (MQ=255)                                                                                                                                                                                                                             gtggCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGCCCCTCTTCCTCACCCTCAGGCTg  >  1:61421/1‑236 (MQ=255)                                                                                                                                                                                                                                    cgaAGGCCCCTTCGCGCTCGGCATACAGGGGGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGCATAGGCGGTAATAGCGGCAATGCTGTTCACCGc                                                                                                                    >  2:146745‑M2/4‑115 (MQ=255)                                                                                                                                                                                                                                       |                                                                                                                                                                                                                                  GCCTTCGGCGATCCACGGTTCGACCTGCGGATAACGGGCTTCGTAGTCGATCACGGGCTGGCCGGTGGCGGTTCGCCCCGTGGTGGCCAGGCGCATTTCTTCTTCAGTGAGGGTGTTGCGGTAGGTACGGCCCAGTTTGGGCACGACCACCACCTGGCCGAACAGGCCGTTGGAGACGTTGCCCGCCGTGCCCTCGCCGCCGAACGTAGCGGCTTTGCTGGTGGCGGCGAAGGCCCCTTCGCGCTCGGCATACAGGGTGTAGCTGCGGGTGCTGCCGGGGCTGACGAAGAAGTTGCCGTTACGCCCGGTATAGGCGGAAATATCGGCAATGCTGTTCACCGCCTGCATCCCGTTGACCTGGAAGCCGACCATGCGCTCGGCCACCTGCTCGTCGGCGACAAAGCCCTCGCCGCCTTCGTTTTCAACCTCCGGCCCCTCTTCCTCACCCTCAGGCTG  >  AE015451/3959545‑3960000

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.