New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | AE015451 | = 5435853 | 47 (1.080) | 5 (0.120) | 4/324 | NT | 11.3% | coding (32/873 nt) | fieF | divalent cation efflux transporter |
? | AE015451 | = 5435909 | 34 (0.820) | coding (88/873 nt) | fieF | divalent cation efflux transporter |
CAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5435743‑5435853 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcctTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAG < AE015451/5435909‑5435722 CAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGGTGATCACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGGTGCCGGCCACCGCCAGTGATGCGCGCGTG > 1:713879/1‑155 AGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGCGCCTTGCACAGCAACAGGATGCCGGCCACCGCCAGTCATGCGCGCGc > 2:46521/1‑123 CACGGATGATCACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGg > 2:632056/1‑128 ACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAG > 1:321806/1‑214 ACTACCCCGGCTGAACACCAGCGCCTTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGGGTCCTTGTGGCT > 2:111171/1‑137 gcGCGCCTTGCCAAGCACCGGGAGGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCT < 2:152334/123‑1 CAGCACCGCGGCAGCATCGAACAACTGGCCAGCCTGGGCCTGGTCCCGGCAGCCTGAGCCACAAGGACACTGACCACGGATGATCACTACCCCGGCTGAACACCAGCGCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > AE015451/5435743‑5435853 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccagcgcctTGCTCAGCACCAGGATGCCGGCCACCGCCAGTGATGCGCGCGTGGCAAGGCGGAGCAGGCGCTGGTGTTCAGCCGGGGTAGTGATCATCCGTGGTCAGTGTCCTTGTGGCTCAGGCTGCCGGGACCAGGCCCAGGCTGGCCAGTTGTTCGATGCTGCCGCGGTGCTGGATCAGCCGTGGGTCGTTCAG < AE015451/5435909‑5435722 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |