New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1200130	38 (0.870)	5 (0.120)	4/324	NT	11.6%	coding (985/1203 nt)	gspF	putative protein secretion protein for export
	?	AE015451	= 1200145	40 (0.970)					coding (1000/1203 nt)	gspF	putative protein secretion protein for export

CAGGTGCTGGAAAGCGCGCGTCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTGTGACGACGAG  >  AE015451/1199926‑1200355                                                                                                                                                                                                             |                                                                                                                                                                                                                                   cAGGTGCTGGAAAGCGCGCGTCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGgcagcggcggg                                                                                                                                                                                                          <  1:507371‑M2/231‑12 (MQ=255)                    gTCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCg                                                                                                                                                                                                   <  1:390174/219‑1 (MQ=255)                                 ccTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGgcagcgg                                                                                                                                                                                                              <  2:390172‑M2/195‑8 (MQ=255)                                 ccTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTg                                                                                                                                                                      >  1:320466/1‑235 (MQ=255)                                                      ttgcgtggcCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGctgctg                                                                                                                                                                                                                                  <  2:398058/152‑1 (MQ=255)                                                       ggcgtggcCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGc                                                                                                                                                                    >  1:371924/1‑215 (MQ=255)                                                        gcgtggcCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCtt                                                                                                                                               >  1:510088/1‑235 (MQ=255)                                                                    tCGAGGCCTTGCGAGTGGCCACCGAACCCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGCGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGgcagcggcgggaattgctggctggcat                                                                                                                                                                                          >  1:321744‑M2/1‑153 (MQ=255)                                                                     cGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCg                                                                                                                                                                                                   >  1:502110/1‑170 (MQ=255)                                                                     cGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCCGGCGGCCATGCCCGAccg                                                                                                                                                                          >  2:257064/1‑195 (MQ=255)                                                                          ccTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCgg                                                                                                                                                                                                  <  1:720334/166‑1 (MQ=255)                                                                                aaGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATg                                                                                                                      >  1:458640/1‑236 (MQ=255)                                                                                     gCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGc                                                                                                                                                                                 <  2:530745/172‑1 (MQ=255)                                                                                        aCCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTgg                                                                                                                                                                                          >  2:388383/1‑160 (MQ=255)                                                                                            aaaCCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGt                                                                                                                                   <  2:297552/211‑1 (MQ=255)                                                                                                      cAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGgcg                                                                                                                   >  2:478475/1‑217 (MQ=255)                                                                                                               tATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCg                                                                                                                                                                                        >  2:185563/1‑139 (MQ=255)                                                                                                                           cATGGAGCAGGTGCCCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGa                                                                                                                                <  2:639369/183‑1 (MQ=255)                                                                                                                            aTGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGgcagcggcgggaattgc                                                                                                                                                                                                    >  1:771215‑M2/1‑97 (MQ=255)                                                                                                                                       gcgcCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCgacgac                                                                                                                                                             >  1:89237/1‑142 (MQ=255)                                                                                                                                       gcgcCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGAt                                                                                     >  2:425130/1‑213 (MQ=255)                                                                                                                                       gcgcCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGAt                                                                                     <  1:425132/213‑1 (MQ=255)                                                                                                                                          ccAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAACCCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATc                                                               <  1:275048/233‑1 (MQ=255)                                                                                                                                                cGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATg                                                                                                                      <  1:620723/172‑1 (MQ=255)                                                                                                                                                  tGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGgcagcggcgggaattgctggctggcatccagc                                                                                                                                                                                     >  2:507369‑M2/1‑75 (MQ=255)                                                                                                                                                    cAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGgcg                                                                                <  1:737018/205‑1 (MQ=255)                                                                                                                                                           gcACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATc                                                               <  2:775694/215‑1 (MQ=255)                                                                                                                                                            ccccagCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGgcagcggcgggaattgctggctggcatccagc                                                                                                                                                                                     >  2:562874‑M2/3‑65 (MQ=255)                                                                                                                                                               cAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCa                                      >  1:338040/1‑236 (MQ=255)                                                                                                                                                                  ccTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGtt                                                                                                                                                                                                                      <  2:62151/58‑1 (MQ=255)                                                                                                                                                                    tGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGt                                                                                                               >  1:375326/1‑159 (MQ=255)                                                                                                                                                                    tGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGt                                                                                                               <  2:375324/159‑1 (MQ=255)                                                                                                                                                                            gcgcTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCtga                                                                                                  <  2:340674/163‑1 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCcaaccatgttcaccagcagcggcgggaattgctggctggcatccagcgcacggtgcaggctggtgccgccctgca                                                                                                                                                         >  2:507369‑M1/1‑32 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCcaaccatgttcaccagcagcggcgggaattgctggctggcatccagcgcacggtgcaggctgggg                                                                                                                                                                   >  2:562874‑M1/1‑32 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGc                                                                                                                                        >  2:260703/1‑124 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGtt                                                                   >  1:586402/1‑192 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCggg                                                    >  1:190563/1‑206 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCCACTCAACCAgg                       >  1:466356/1‑236 (MQ=255)                                                                                                                                                                              gcTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAgg                       >  1:648353/1‑236 (MQ=255)                                                                                                                                                                               cTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAgg                       >  1:721728/1‑235 (MQ=255)                                                                                                                                                                                   aTGCCAGCCAGCAATTCCCGCCGCTGCcaaccatgttcaccagcagcggcgggaattgctggctggcatccagcgcacggtgcaggctggtgccgccctgcacgtgttggcgcgcctgctccatggccaggcggatacgccggttgccgatgggttcggtggccactcgcaaggcctcga                                                                           >  1:321744‑M1/1‑27 (MQ=255)                                                                                                                                                                                        agccagcAATTCCCGCCGCTGCcaaccatgttcaccagcagcggc                                                                                                                                                                                                             >  2:390349‑M1/1‑22 (MQ=255)                                                                                                                                                                                             gcAATTCCCGCCGCTGCcaaccatgttcaccagcagcggcgggaattgctggctggcatccagcgcacggtgcaggctggtgccgccctgcacgtgttggcgcacctgctccat                                                                                                                                   >  1:771215‑M1/1‑17 (MQ=255)                                                                                                                                                                                             gcAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGGTACCGCCATGGCGCt                                                                                                                 >  2:111920/1‑132 (MQ=255)                                                                                                                                                                                                aTTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTGTgacg       <  2:510086/234‑1 (MQ=255)                                                                                                                                                                                                 tgcccGCCGCTGCTGGGGAACAGGGTGGGCAGCGGCGGGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGAt                                                                                     <  2:261857/153‑1 (MQ=255)                                                                                                                                                                                                   cccGCCGCTGCcaaccatgttcaccagcagcggcgggaattgctggctggcatccagcgcacggtgcaggctggtgccgccctgcacgtgttggcgcacctgctccatggccaggcggatacgccggttgccgatggtttcggtggccacttgcaaggcttcgagcagggccacgccactgccacagagaatcgccaggctgcgcgccagacgcgcgctttccagcacctg        <  1:507371‑M1/231‑221 (MQ=255)                                                                                                                                                                                                    tcgccgcTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTGTGACGACgag  >  1:596271/2‑235 (MQ=255)                                                                                                                                                                                                    ccgccgCTGCTGGTGACCATGGTGGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTGTgacgac     <  1:156358/232‑1 (MQ=255)                                                                                                                                                                                                      gccgcTGCTGGTGAACATGGTTGgcagcggcgggaattgctggct                                                                                                                                                                                               >  2:390349‑M2/1‑23 (MQ=255)                                                                                                                                                                                                      gccgcTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTATTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCt                   >  1:433113/1‑216 (MQ=255)                                                                                                                                                                                                       ccgcTGCcaaccatgttcaccagcagcggcgggaattgctggctggcatccagcgcacggtgcaggctggtgccgccctgcacgtgttggcgcacctgctccatggccaggcggatacgccggttgccgatggtttcggtggccacttgcaaggcttcgagcagggccacgccactgccacagagaatcgccagg                                        <  2:390172‑M1/195‑189 (MQ=255)                                                                                                                                                                                                             |                                                                                                                                                                                                                                   CAGGTGCTGGAAAGCGCGCGTCTGGCGCGCAGCCTGGCGATTCTCTGTGGCAGTGGCGTGGCCCTGCTCGAAGCCTTGCAAGTGGCCACCGAAACCATCGGCAACCGGCGTATCCGCCTGGCCATGGAGCAGGTGCGCCAACACGTGCAGGGCGGCACCAGCCTGCACCGTGCGCTGGATGCCAGCCAGCAATTCCCGCCGCTGCTGGTGAACATGGTTGGCAGCGGCGAGGCCAGCGGCACCCTGGCGGACATGCTCGAGCGCGTGGCCGACGACCAGGAGCGCGGCTTTGCCCGCCAGGTCGATACCGCCATGGCGCTGTTCGAA‑CCCCTGATGATCCTGGTGATGGGCGCCGTGGTGCTGTTCATCGTGCTGGCGGTGCTGCTGCCGATCATGCAACTCAACCAGGGCCTGCAATTGTGACGACGAG  >  AE015451/1199926‑1200355

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.