New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1356224	47 (1.080)	3 (0.070)	3/330	NT	6.5%	coding (100/699 nt)	PP_1181	DNA‑binding response regulator
	?	AE015451	= 1356245	41 (0.970)					coding (121/699 nt)	PP_1181	DNA‑binding response regulator

TCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGGC  >  AE015451/1355998‑1356418                                                                                                                                                                                                                                   |                                                                                                                                                                                                   tCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCg                                                                                                                                                                                           >  1:412263/1‑236 (MQ=255)                     gggAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTg                                                                                                                                                                                                  >  2:609481/1‑209 (MQ=255)                     gggAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGcc                                                                                                                                                                                   >  2:556478/1‑224 (MQ=255)                     gggAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAg                                                                                                                                                                        >  1:234122/1‑235 (MQ=255)                                                   ggTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCg                                                                                                                                                                                           >  2:19041/1‑186 (MQ=255)                                                   ggTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGCCAGCCAGCCCGACCTgg                                                                                                                                           >  2:579857/1‑234 (MQ=255)                                                   ggTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTg                                                                                                                                            <  2:412261/233‑1 (MQ=255)                                                               ccccccATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGcacgggcgccatcggcctccacc                                                                                                                                                                             <  2:703703‑M1/188‑24 (MQ=255)                                                                 ccccATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGAt                                                                                                                                       <  1:149341/224‑1 (MQ=255)                                                                                       aGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGc                                                                                                        >  2:276779/1‑233 (MQ=255)                                                                                        gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGAcagcc                                                                                                                                                       <  1:224824/185‑1 (MQ=255)                                                                                        gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGAcagcc                                                                                                                                                       >  2:224822/1‑185 (MQ=255)                                                                                        gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCt                                                                                                      >  1:674851/1‑234 (MQ=255)                                                                                        gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGACGCGAGGCGcatc                                                                                                                                                                 >  2:610146/1‑175 (MQ=255)                                                                                          tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGCCCTg                                                                                                                                            >  1:89236/1‑194 (MQ=255)                                                                                          tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCg                                                                                                                >  1:5531/1‑222 (MQ=255)                                                                                          tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCt                                                                                                      >  2:349584/1‑232 (MQ=255)                                                                                          tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAg                                                                                                   >  1:803540/1‑235 (MQ=255)                                                                                                         ccAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGt                                                                                    <  1:579859/235‑1 (MQ=255)                                                                                                                   caaGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATcc                                                                                                                                     <  2:618482/176‑1 (MQ=255)                                                                                                                         cAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCAGCTGCCGCCGGGTGCGCAGCCAGTACCAgg                                                                   <  1:556480/236‑1 (MQ=255)                                                                                                                           aaGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGgcgc                                                                                                                                                                                    >  2:320357/1‑121 (MQ=255)                                                                                                                           aaGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGGGCGCAGCCAGTACCAgggg                                                                 >  1:250397/1‑236 (MQ=255)                                                                                                                           aaGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGCCGCGGTGGAGGCCGag                                                                                                                                                                                         >  2:238359/1‑115 (MQ=255)                                                                                                                                           cATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGCGGTCCCGGcggc                                                                                                                                                                                                >  2:98965‑M1/1‑89 (MQ=255)                                                                                                                                           cATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCa                                                       >  1:651189/1‑230 (MQ=255)                                                                                                                                                cccGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                             <  1:276781/235‑1 (MQ=255)                                                                                                                                                 ccGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGACGAGTACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                             <  2:432124/234‑1 (MQ=255)                                                                                                                                                     aTCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGGGCATCATGGACAGCCAGCCCGACCt                                                                                                                                             >  1:295903/1‑134 (MQ=255)                                                                                                                                                      tCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGTAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGt                                      >  1:742831/1‑236 (MQ=255)                                                                                                                                                      tCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCgcgcgcc                                        >  1:644365/1‑233 (MQ=255)                                                                                                                                                       ccTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATTGTTTCGAGGTCGCGGTgg                                                                                                                                                                                                 >  2:243479/1‑80 (MQ=255)                                                                                                                                                        cgcATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAg                                                                                                   <  1:208124/171‑1 (MQ=255)                                                                                                                                                             cgtcgAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGCGGCCGATgcc                                                                                                                                                                                      >  2:582522/1‑83 (MQ=255)                                                                                                                                                             cgtcgAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGGGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGaa                                >  2:329627/1‑235 (MQ=255)                                                                                                                                                              gtcgAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACt                              >  1:486432/1‑236 (MQ=255)                                                                                                                                                                 gAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCg                                                                                                                   <  2:180321/148‑1 (MQ=255)                                                                                                                                                                  aaGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGcacgggcgccatcggcctccaccgcgacct                                                                                                                                                                      >  1:769451‑M1/1‑66 (MQ=255)                                                                                                                                                                  aaGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGcacgggcgccatcggcctccaccgcgacct                                                                                                                                                                      <  2:769449‑M1/96‑31 (MQ=255)                                                                                                                                                                   aGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCt                                                                                                      >  2:90458/1‑159 (MQ=255)                                                                                                                                                                       tcccAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGCCCTGGTGATCCTCGACCTGATGCTCCCCGGCGCGGCCGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                             <  1:215641/210‑1 (MQ=255)                                                                                                                                                                       tcccAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCg                                                              <  1:37170/193‑1 (MQ=255)                                                                                                                                                                       gacCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTGTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAgg                      <  1:19041/235‑1 (MQ=255)                                                                                                                                                                            gcgcCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATTGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCt                                                                                              >  2:703075/1‑158 (MQ=255)                                                                                                                                                                                cTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCt                                                         >  1:629819/1‑191 (MQ=255)                                                                                                                                                                                     cGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGGGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGAcc       <  1:329629/236‑1 (MQ=255)                                                                                                                                                                                          tccccgccgAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                             <  1:156660/190‑1 (MQ=255)                                                                                                                                                                                          tCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGgc  <  1:349586/236‑1 (MQ=255)                                                                                                                                                                                             ccgccgAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGc                                                                <  2:5531/171‑1 (MQ=255)                                                                                                                                                                                               gccgAATACCTGCAGGCCAGTGGTTTCGAGGTCGCAGTGGAGGCCGTTGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCg                                                                                                                                                 <  2:384529/88‑1 (MQ=255)                                                                                                                                                                                                     tACCTGAAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGt                                                                                    <  2:471083/143‑1 (MQ=255)                                                                                                                                                                                                                      tttCGAGGTCGCGGTGGACGCCGAt                                                                                                                                                                                         >  2:797631/1‑25 (MQ=255)                                                                                                                                                                                                                       ttCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGt                     <  2:294544/188‑1 (MQ=255)                                                                                                                                                                                                                           aGGTCGCGGTGGAGGCCGATGGCGCCCGTGccgcgacctcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtctt                                                                                                             <  2:769449‑M2/96‑67 (MQ=255)                                                                                                                                                                                                                           aGGTCGCGGTGGAGGCCGATGGCGCCCGTGccgcgacctcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtctt                                                                                                             >  1:769451‑M2/1‑30 (MQ=255)                                                                                                                                                                                                                                  ggTGGAGGCCGATGGCGCCCGTGccgcgacctcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtcttcgacgatgaggatgcggggtatggggtggtccatggctttggccttgttgttcttgggatcgtgtcagggcagctgagagtatgaatgtagatgggggg          <  2:703703‑M2/188‑166 (MQ=255)                                                                                                                                                                                                                                   |                                                                                                                                                                                                   TCTGAAGATCTGGGGTGCCTGGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGGC  >  AE015451/1355998‑1356418

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.