New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	= 1356224	47 (1.080)	3 (0.070)	3/330	NT	6.5%	coding (100/699 nt)	PP_1181	DNA‑binding response regulator
	?	AE015451	= 1356245	41 (0.970)					coding (121/699 nt)	PP_1181	DNA‑binding response regulator

GGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGGCGCCGACGACTACGTCTGCAAACCCGTGCGCCCACGCTTGCTGCTGGC  >  AE015451/1356018‑1356465                                                                                                                                                                                                                                    |                                                                                                                                                                                                                             gggAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAg                                                                                                                                                                                                                       >  1:234122/1‑235 (MQ=255)                               ggTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGCCAGCCAGCCCGACCTgg                                                                                                                                                                                          >  2:579857/1‑234 (MQ=255)                               ggTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTg                                                                                                                                                                                           <  2:412261/233‑1 (MQ=255)                                             ccccATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGAt                                                                                                                                                                                      <  1:149341/224‑1 (MQ=255)                                                                   aGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGc                                                                                                                                                       >  2:276779/1‑233 (MQ=255)                                                                    gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGAcagcc                                                                                                                                                                                                      >  2:224822/1‑185 (MQ=255)                                                                    gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGAcagcc                                                                                                                                                                                                      <  1:224824/185‑1 (MQ=255)                                                                    gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCt                                                                                                                                                     >  1:674851/1‑234 (MQ=255)                                                                    gCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGACGCGAGGCGcatc                                                                                                                                                                                                                >  2:610146/1‑175 (MQ=255)                                                                      tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGCCCTg                                                                                                                                                                                           >  1:89236/1‑194 (MQ=255)                                                                      tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCg                                                                                                                                                               >  1:5531/1‑222 (MQ=255)                                                                      tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCt                                                                                                                                                     >  2:349584/1‑232 (MQ=255)                                                                      tGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAg                                                                                                                                                  >  1:803540/1‑235 (MQ=255)                                                                                     ccAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGt                                                                                                                                   <  1:579859/235‑1 (MQ=255)                                                                                               caaGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATcc                                                                                                                                                                                    <  2:618482/176‑1 (MQ=255)                                                                                                     cAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCAGCTGCCGCCGGGTGCGCAGCCAGTACCAgg                                                                                                                  <  1:556480/236‑1 (MQ=255)                                                                                                       aaGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGGGCGCAGCCAGTACCAgggg                                                                                                                >  1:250397/1‑236 (MQ=255)                                                                                                                       cATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCa                                                                                                      >  1:651189/1‑230 (MQ=255)                                                                                                                            cccGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                                                                            <  1:276781/235‑1 (MQ=255)                                                                                                                             ccGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGACGAGTACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                                                                            <  2:432124/234‑1 (MQ=255)                                                                                                                                 aTCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGGGCATCATGGACAGCCAGCCCGACCt                                                                                                                                                                                            >  1:295903/1‑134 (MQ=255)                                                                                                                                  tCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGTAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGt                                                                                     >  1:742831/1‑236 (MQ=255)                                                                                                                                  tCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCgcgcgcc                                                                                       >  1:644365/1‑233 (MQ=255)                                                                                                                                    cgcATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAg                                                                                                                                                  <  1:208124/171‑1 (MQ=255)                                                                                                                                         cgtcgAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGGGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGaa                                                                               >  2:329627/1‑235 (MQ=255)                                                                                                                                          gtcgAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACt                                                                             >  1:486432/1‑236 (MQ=255)                                                                                                                                             gAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCg                                                                                                                                                                  <  2:180321/148‑1 (MQ=255)                                                                                                                                               aGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCt                                                                                                                                                     >  2:90458/1‑159 (MQ=255)                                                                                                                                                   tcccAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGCCCTGGTGATCCTCGACCTGATGCTCCCCGGCGCGGCCGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                                                                            <  1:215641/210‑1 (MQ=255)                                                                                                                                                   tcccAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCg                                                                                                             <  1:37170/193‑1 (MQ=255)                                                                                                                                                   gacCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTGTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAgg                                                                     <  1:19041/235‑1 (MQ=255)                                                                                                                                                        gcgcCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATTGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCt                                                                                                                                             >  2:703075/1‑158 (MQ=255)                                                                                                                                                            cTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCt                                                                                                        >  1:629819/1‑191 (MQ=255)                                                                                                                                                                 cGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGGGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGAcc                                                      <  1:329629/236‑1 (MQ=255)                                                                                                                                                                      tccccgccgAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACcgc                                                                                            <  1:156660/190‑1 (MQ=255)                                                                                                                                                                      tCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGgc                                                 <  1:349586/236‑1 (MQ=255)                                                                                                                                                                         ccgccgAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGc                                                                                                               <  2:5531/171‑1 (MQ=255)                                                                                                                                                                           gccgAATACCTGCAGGCCAGTGGTTTCGAGGTCGCAGTGGAGGCCGTTGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCg                                                                                                                                                                                                <  2:384529/88‑1 (MQ=255)                                                                                                                                                                                 tACCTGAAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGt                                                                                                                                   <  2:471083/143‑1 (MQ=255)                                                                                                                                                                                                   ttCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGt                                                                    <  2:294544/188‑1 (MQ=255)                                                                                                                                                                                                       aGGTCGCGGTGGAGGCCGATGGCGCCCGTGccgcgacctcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtctt                                                                                                                                                            <  2:769449‑M2/96‑67 (MQ=255)                                                                                                                                                                                                       aGGTCGCGGTGGAGGCCGATGGCGCCCGTGccgcgacctcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtctt                                                                                                                                                            >  1:769451‑M2/1‑30 (MQ=255)                                                                                                                                                                                                              ggTGGAGGCCGATGGCGCCCGTGccgcgacctcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtcttcgacgatgaggatgcggggtatggggtggtccatggctttggccttgttgttcttgggatcgtgtcagggcagctgagagtatgaatgtagatgggggg                                                         <  2:703703‑M2/188‑166 (MQ=255)                                                                                                                                                                                                                     gCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGGCGCCGACGACTACGTCTGCAAACCCGTGCGCCCACGCTTGCTGCTGGc  <  1:1490/236‑1 (MQ=255)                                                                                                                                                                                                                            gcgcCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCa                                                                                       <  2:378629/144‑1 (MQ=255)                                                                                                                                                                                                                                ccGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGCCCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAgg                                                                     <  2:234120/158‑1 (MQ=255)                                                                                                                                                                                                                                 gccgccgggaccgcgaaaccattggcctgcaggtattcggcggtgagttcggcgaggcgctggtcgtcttcgacgatgaggatgcggggtatg                                                                                                                                     >  2:98965‑M2/4‑4 (MQ=255)                                                                                                                                                                                                                                    |                                                                                                                                                                                                                             GGGAGATCGAGCACCGCCCGCGGGGCGCTCGGTCTCGCAGGGCCCCCCATCTACATTCATACTCTCAGCTGCCCTGACACGATCCCAAGAACAACAAGGCCAAAGCCATGGACCACCCCATACCCCGCATCCTCATCGTCGAAGACGACCAGCGCCTCGCCGAACTCACCGCCGAATACCTGCAGGCCAATGGTTTCGAGGTCGCGGTGGAGGCCGATGGCGCCCGTGCCGCGAGGCGCATCATCGACAGCCAGCCCGACCTGGTGATCCTCGACCTGATGCTCCCCGGCGAGGACGGCCTGAGCATCTGCCGCCGGGTGCGCAGCCAGTACCAGGGGCCGATCCTCATGCTCACCGCGCGCAGTGATGAACTGGACCAGGTCCAGGGCCTGGACCTGGGCGCCGACGACTACGTCTGCAAACCCGTGCGCCCACGCTTGCTGCTGGC  >  AE015451/1356018‑1356465

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.