New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	1949290 =	25 (0.570)	3 (0.070)	3/332	NT	10.9%	coding (365/1746 nt)	PP_1749	GNAT family acetyltransferase
	?	AE015451	1949333 =	25 (0.590)					coding (322/1746 nt)	PP_1749	GNAT family acetyltransferase

TGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGG  >  AE015451/1949059‑1949517                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                    gcagccagccacacgaccagccgcgtgccgtgcactgcggctggggccggctgttgataggccacacctaccccgacccggcttccctggccgaggatctgctcgacgagcacccgggcgaacgcgacatcgccctgtacgtggccgcaccgcagcaggtgttggcacaggcccctcagcagctgttcctcgacccgtccgacaccctgcgcctgtggttcaccgactaccgcccg                                                                                                                                                                                                                                 >  1:644676‑M1/232‑236 (MQ=255)    gggTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCccg                                                                                                                                                                                                                                 >  2:476766/1‑233 (MQ=255)                                                                        gCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAgg                                                                                                                                                                 >  2:302112/1‑229 (MQ=255)                                                                           cATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCg                                                                                                                                                           >  2:279068/1‑232 (MQ=255)                                                                              gACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACCCCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGt                                                                                                                                                                                        <  2:328727/200‑1 (MQ=255)                                                                                cGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCAcgcg                                                                                                                                                                                                                        >  2:61320/1‑166 (MQ=255)                                                                                     ccGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGaa                                                                                                                                             <  1:302114/236‑1 (MQ=255)                                                                                       gATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACa                                                                                                                                           <  1:476768/236‑1 (MQ=255)                                                                                                  cgcTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAggg                                                                                                                                <  1:572537/236‑1 (MQ=255)                                                                                                         ttCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGTCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCt                                                                                                                                                                                                    <  1:760334/161‑1 (MQ=255)                                                                                                                    ccagccaATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACctg                                                                                                               >  1:545772/1‑235 (MQ=255)                                                                                                                    ccagccaATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACctg                                                                                                               >  1:84408/1‑235 (MQ=255)                                                                                                                    ccagccaATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCACGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGcc                                                                                                                                                                                                                  >  2:541925/1‑136 (MQ=255)                                                                                                                                      cACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAggggg                                                                                                                                                              >  1:185083/1‑168 (MQ=255)                                                                                                                                                      ggTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTcgc                                                                               >  2:288797/1‑233 (MQ=255)                                                                                                                                                          agcagcTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGcc                                                                        >  1:799872/1‑236 (MQ=255)                                                                                                                                                                tCGGCGTCGACGGGGAGCACCCCGCGCGCCTGGTACAGCGGGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGcc                                                                                                                                                                                                                                   <  2:94230/75‑1 (MQ=255)                                                                                                                                                                  ggCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCTCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCgc                                                                                                                                                 >  2:413345/1‑154 (MQ=255)                                                                                                                                                                   gCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCt                                                                >  1:577763/1‑235 (MQ=255)                                                                                                                                                                   gCGTCGACGGGGAGCACCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGgc                                                                                                                                                                      <  1:129628/133‑1 (MQ=255)                                                                                                                                                                        gACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGAGCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGa                                                          <  1:614216/236‑1 (MQ=255)                                                                                                                                                                                    cccGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCt                                                 >  1:774230/1‑233 (MQ=255)                                                                                                                                                                                             ctcgacccgtccgaccccctgcgcctgtggttcaccgactaccGCCCGCCGCACGCGGAAGCCGCGAAATCCCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAggg                                                                                                                                >  1:386724‑M1/44‑145 (MQ=255)                                                                                                                                                                                             cTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGa                                                                                                                                                                                                              >  2:352795/1‑67 (MQ=255)                                                                                                                                                                                                       ccgacaccctgcgcctgtggttcaccgactaccGCCCGCCGCACGCGGAAGCCGCGAAATACCCGctgctc                                                                                                                                                                                                <  2:386722‑M1/38‑3 (MQ=255)                                                                                                                                                                                                        cgacaccctgcgcctgtggtccaccgactaccGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGACCCACAGGCGCCGGGTGTCGGACGGGTc                                                                                                                                                   <  1:668737‑M1/83‑1 (MQ=255)                                                                                                                                                                                                          ttGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACGGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTa                        >  1:452061/1‑236 (MQ=255)                                                                                                                                                                                                          ttGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACATGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGCAGCCGGGTCGGGGTa                        >  1:230349/1‑236 (MQ=255)                                                                                                                                                                                                            gATCGCCTGCCCGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAATCACAGGCGCCGGGTGTCGGACGGGTCGACGcaca                                                                                                                                           >  2:66132/1‑119 (MQ=255)                                                                                                                                                                                                            gATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAATca                                                                                                                                                                           >  2:66134/1‑87 (MQ=255)                                                                                                                                                                                                                    gCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAgg                      <  1:291785/228‑1 (MQ=255)                                                                                                                                                                                                                                   tCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCgg  <  2:799870/233‑1 (MQ=255)                                                                                                                                                                                                                                    cTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGt                         <  1:19417/209‑1 (MQ=255)                                                                                                                                                                                                                                        |                                                                                                                                                                                                                                    TGTGGGTCCACCGCCAGGCACCACAGGCTGCTGCCATGCTCGGGGTCATCGAACGCCTTGGTGTGGTTCAGGCCCATGACGCTGCCGATAATCGCGCCGCTGTCTTCGTCCTCTGCCAGCCAATACACCGGGCCACCCAAGTGCCGGGGGGTAAGCAGCTCGGCGTCGACGGGGAGCATCCCGCGCGCCTGGTACAGCGTGTTGATCGCCTGCCAGTCGGCGGGGTTCTGTGCCCGCCGCACGCGGAAGCCGCGAAATACCCGCTGCGCCGGGCGGTAGTCGGTGAACCACAGGCGCAGGGTGTCGGACGGGTCGAGGAACAGCTGCTGAGGGGCCTGTGCCAACACCTGCTGCGGTGCGGCCACGTACAGGGCGATGTCGCGTTCGCCCGGGTGCTCGTCGAGCAGATCCTCGGCCAGGGAAGCCGGGTCGGGGTAGGTGTGGCCTATCAACAGCCGG  >  AE015451/1949059‑1949517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.