| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | AE015451 | = 3524068 | NA (NA) | 3 (0.070) | 3/320 | NT | NA | coding (781/1533 nt) | PP_3114 | transposase |
| ? | AE015451 | = 3524250 | NA (NA) | coding (963/1533 nt) | PP_3114 | transposase | |||||
GTATCGATATCCCGCGCCAAACCCTGGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTGTGCAGGTGTTGAAAGAGCCGGGGCGTGAGCCCAGCAGCCAATCCTGGATGTGGGTACAAACCGGCGGCCCACCTGATCGACCAGTGATCCTTTTCGACTAC > AE015451/3523901‑3524130 | gtctCGATATCCCGCGCCAAACCCTGGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTGTGCAGGTGTTGAAAGAGCCGGGGCGTGAGCCCAGCAGCCAATCCTGGATGTgg < 2:333192/179‑1 (MQ=1) gaccatcCACTGTGATGAAACAGGAGTGAAGGTGGTGAAAGAGCACGGGCGTGAGCCCAGCAGCCAATCCTGGATGTGGGTACAAACCGGCGGCACACCTGATCGACCAGTGATCCTTTTCGACTAc > 2:334108/4‑127 (MQ=1) | GTATCGATATCCCGCGCCAAACCCTGGCACGCTGGGTGATTCAATGCAGCGAGCACTTTCAGCCGCTGCTGAATCTGATGCGCGAAAGCCTGTTGAAGAGTCGGATCATCCACTGTGATGAAACACGTGTGCAGGTGTTGAAAGAGCCGGGGCGTGAGCCCAGCAGCCAATCCTGGATGTGGGTACAAACCGGCGGCCCACCTGATCGACCAGTGATCCTTTTCGACTAC > AE015451/3523901‑3524130 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |