New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4371608 =	54 (1.240)	3 (0.110)	3/208	NT	8.7%	intergenic (‑193/‑1379)	PP_5636/PP_3849	protein of unknown function/putative calcium‑binding protein, hemolysin‑type
	?	AE015451	= 4427498	30 (1.130)					intergenic (+82/+20)	PP_3920/PP_t61	putative Phage integrase/tRNA‑Cys

CGCGACACACCAGCCAGCACCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGCCCACCTTCCAG  >  AE015451/4371379‑4371820                                                                                                                                                                                                                                      |                                                                                                                                                                                                                     cgcgACACACCAGCCAGCACCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCg                                                                                                                                                                                                                  >  2:492876/1‑234 (MQ=255)    gACACACCAGCCAGCACCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGCACTCTTGCCTTTTTTCGACCCATAAAGAACAACCCCGCAGACGTTAATCTGCGAGGCt                                                                                                                                                                                                             >  2:146844/1‑236 (MQ=255)    gACACACCAGCCAGCACCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCgggg                                                                                                                                                                                                               >  2:359603/1‑234 (MQ=255)       cagttccgcgacatccgaccgaaggcggcctcggagatcaacgacctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatcaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTc                                                                                                                                                                                                          >  1:300284‑M1/224‑236 (MQ=255)         acCAGCCAGCACCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTc                                                                                                                                                                                                          >  2:712894/1‑234 (MQ=255)             cgcgacatccgaccgaaggcggcctcggagatcaacgacctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAAtg                                                                                                                                                                                                     <  1:480084‑M1/18‑1 (MQ=255)                 acatccgaccgaaggcggcctcggagatcaacgacctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGa                                                                                                                                                                                                <  1:749417‑M1/23‑1 (MQ=255)                   aCCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCgg                                                                                                                                                                                                                 >  1:600863/1‑217 (MQ=255)                          gCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAgg                                                                                                                                                                                        >  1:323162/1‑235 (MQ=255)                                   cATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCgggg                                                                                                                                                                                                               <  2:616852/203‑1 (MQ=255)                                     tcggagatcaacgacctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAAc                                                                                                                                                                            <  1:742135‑M1/43‑1 (MQ=255)                                         agatcaacgacctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGc                                                                                                                                                                        >  1:202550‑M1/190‑236 (MQ=255)                                            tcaacgacctgagcggtgcaagcgttctgctgggccactcaaaggaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCt                                                                                                                                                                                                                     >  1:188027‑M1/187‑188 (MQ=255)                                             cgcgATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGGCGGAAt                                                                                                                                                                                 >  1:73689/1‑223 (MQ=255)                                                cgacctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGa                                                                                                                                                                                          >  2:281645‑M1/183‑211 (MQ=255)                                                  acctgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGa                                                                                                                                                                   >  2:697432‑M1/181‑232 (MQ=255)                                                     tgagcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctccatggCTGCGGGGCTTTCGAAtg                                                                                                                                                                                                     <  2:51411‑M1/18‑1 (MQ=255)                                                     ccAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGt                                                                                                                                                                      <  1:727605/226‑1 (MQ=255)                                                        gcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAAtg                                                                                                                                                                                                     <  2:232556‑M1/18‑1 (MQ=255)                                                        gcgatgcaagcgttctgctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCa                                                                                                                                                         >  1:112215‑M1/175‑236 (MQ=255)                                                        aCCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCa                                                                                                                                                         <  1:728836/236‑1 (MQ=255)                                                        aCCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCa                                                                                                                                                         <  1:285743/236‑1 (MQ=255)                                                         cgatgcaagcgttctgctgggccactccaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCaa                                                                                                                                                        >  1:352564‑M1/174‑236 (MQ=255)                                                                         ctgggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTa                                                                                                                                                                     <  1:691641‑M1/50‑1 (MQ=255)                                                                            ggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGt                                                                                                                                                                      >  2:522621‑M1/155‑203 (MQ=255)                                                                            ggccactcaaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCACAGGTCGGAATc                                                                                                                                                                                <  1:171‑M1/39‑1 (MQ=255)                                                                                cGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACa                                                                                                                                               >  1:453755/1‑222 (MQ=255)                                                                                   ccTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACa                                                                                                                                               >  1:369598/1‑219 (MQ=255)                                                                                    aaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGa                                                                                                                                                               <  2:145926‑M1/56‑1 (MQ=255)                                                                                    aaaagaaggaatcacggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCa                                                                                                                                                         <  2:331739‑M1/62‑1 (MQ=255)                                                                                         cGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCAT‑AAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCAtgcctgc                                                                                                                         >  2:639775/1‑234 (MQ=255)                                                                                         aaggaatcgcggggcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaccctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATc                                                                                                                                                                                >  2:137279‑M1/142‑180 (MQ=255)                                                                                          gAGGCAAGCGTACTGCCGGGCCACTCGAACGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCg                                                                                                                                                                                                                  >  1:569359/1‑145 (MQ=255)                                                                                              cAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCg                                                                                                                                                                               <  1:179218/176‑1 (MQ=255)                                                                                                aGCGTACTGCCGGGCCACTCGAAAGA‑GGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCa                                                                                                                 >  1:565073/1‑235 (MQ=255)                                                                                                 acggagcgcgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaaaaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGAc                                                                                                                                                                  <  2:87113‑M1/53‑1 (MQ=255)                                                                                                    tACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCaata                                                                                                              >  2:88648/1‑235 (MQ=255)                                                                                                         cgtttaccgacgcgtcggggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGaa                                                                                                                                                                             <  2:716635‑M1/42‑1 (MQ=255)                                                                                                         cagggCCACTCGAAAGAGGGAGAGCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCa                                                                                                                                                         <  2:225616/185‑1 (MQ=255)                                                                                                           gggCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCa                                                                                                                                >  1:492263/1‑210 (MQ=255)                                                                                                              ccACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCAtgc                                                                                                                             <  1:707384/210‑1 (MQ=255)                                                                                                               cACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATcgc                                                                                                                                       >  1:388904/1‑199 (MQ=255)                                                                                                                 cTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCaaaa                                                                                                 >  1:608494/1‑235 (MQ=255)                                                                                                                 cTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTGTCGAATGGTGGAGGCCGAGGTCGGAGTCGaa                                                                                                                                                                             >  2:505770/1‑159 (MQ=255)                                                                                                                  tCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACg                                                                                               <  1:766003/236‑1 (MQ=255)                                                                                                                    gAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACgg                                                                                                                                                                >  2:9284/1‑169 (MQ=255)                                                                                                                    gAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAAt                                                                                                                                                       >  2:334716/1‑178 (MQ=255)                                                                                                                      aaGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAg                                                                                            >  1:314976/1‑235 (MQ=255)                                                                                                                           ggccatcgccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGAt                                                                                      >  1:13615‑M1/108‑236 (MQ=255)                                                                                                                           ggAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGAt                                                                                      <  1:712896/236‑1 (MQ=255)                                                                                                                              gaTCGCAAAGGCCTCGAAAGGCTGAAGTTTCAGAACTCCACGCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGACGGaa                                                                                                                                                                                  >  1:395127/1‑141 (MQ=255)                                                                                                                                  gCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGTGGGATTTaca                                                                                 >  2:434295/1‑234 (MQ=255)                                                                                                                                   ccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgctcgcaaagaaaaaccccgcaacctcaattgCTGCGGGGCTTTCg                                                                                                                                                                                                         <  2:544797‑M1/14‑1 (MQ=255)                                                                                                                                   ccaagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAAGGGTGGAGGCCGAGGTCGGAATCGAAcc                                                                                                                                                                           <  2:275453‑M1/44‑1 (MQ=255)                                                                                                                                     aagccttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGAttt                                                                                                                                                            >  2:737223‑M1/98‑156 (MQ=255)                                                                                                                                      aGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCg                                                                                                                                                                          >  2:134968/1‑141 (MQ=255)                                                                                                                                         cttccaaatgatgaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTa                                                                         >  1:331741‑M1/94‑235 (MQ=255)                                                                                                                                         ccTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCg                                                                                                                                                                          >  2:349458/1‑138 (MQ=255)                                                                                                                                         ccTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTa                                                                         <  1:492878/235‑1 (MQ=255)                                                                                                                                             gAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAAccc                                                                     <  1:434297/235‑1 (MQ=255)                                                                                                                                                     gaagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGATGTCGGAATCGAACCGGCGTAGACGGATTTGCa                                                                                                                                                         >  2:721101‑M1/82‑143 (MQ=255)                                                                                                                                                     gAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAAccc                                                                     <  1:547207/227‑1 (MQ=255)                                                                                                                                                      aagttttgggactggtctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGAc                                                                                                                                                                  <  2:36291‑M1/53‑1 (MQ=255)                                                                                                                                                              gAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACAGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAAc                                                                       <  1:9284/216‑1 (MQ=255)                                                                                                                                                               aaCTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGAt                                                                                                                                                              >  2:792616/1‑128 (MQ=255)                                                                                                                                                               aaCTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGAt                                                                                                                                                              <  1:792618/128‑1 (MQ=255)                                                                                                                                                               aaCTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGa                                                                                       >  1:196943/1‑199 (MQ=255)                                                                                                                                                                      ctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATcc                                                                                                                                                     <  2:61916‑M1/66‑1 (MQ=255)                                                                                                                                                                      ctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCg                                                                                                                                                    >  2:474728‑M1/65‑131 (MQ=255)                                                                                                                                                                      ctcaattagttttgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCg                                                                                                                                                    <  1:474730‑M1/67‑1 (MQ=255)                                                                                                                                                                                ttCGGACCTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGc                                                                   <  2:578584/202‑1 (MQ=255)                                                                                                                                                                                 tCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGt                                                                          <  2:565071/194‑1 (MQ=255)                                                                                                                                                                                  tgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAAt                                                                                                                                                       >  1:516054‑M1/53‑116 (MQ=255)                                                                                                                                                                                  tgggacttcggtgttttcctgcgcgcaaagaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAAt                                                                                                                                                       <  2:516052‑M1/64‑1 (MQ=255)                                                                                                                                                                                   ggAACTCTTGCCTTTTTTCGACCCAAAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCAtgcctgc                                                                                                                         <  2:769770/145‑1 (MQ=255)                                                                                                                                                                                    gAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACg                                                                               <  1:334718/186‑1 (MQ=255)                                                                                                                                                                                              cTTTTTTCGACCCCTAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGt                                                                          <  1:538704/181‑1 (MQ=255)                                                                                                                                                                                                     cGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGc                                                                                                                                                                        <  2:635446/80‑1 (MQ=255)                                                                                                                                                                                                     cGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGc                                                                                                                                                                        >  1:635448/1‑80 (MQ=255)                                                                                                                                                                                                         ccATAAAGAAACACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGCCCAcc        <  1:146846/236‑1 (MQ=255)                                                                                                                                                                                                         ccATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGc             <  1:359605/231‑1 (MQ=255)                                                                                                                                                                                                          cATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCtttttt               >  1:332683/1‑228 (MQ=255)                                                                                                                                                                                                          cATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCtttttt               <  2:332681/228‑1 (MQ=255)                                                                                                                                                                                                              agaaaaaccccgcaacctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGCCCACCTTc     <  2:540087‑M1/210‑1 (MQ=255)                                                                                                                                                                                                              aaGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCAtgcctgc                                                                                                                         <  1:377807/118‑1 (MQ=255)                                                                                                                                                                                                              aaGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCAtgcctgc                                                                                                                         >  2:377805/1‑118 (MQ=255)                                                                                                                                                                                                               aGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGCCCACCTTCCAg  <  1:639777/236‑1 (MQ=255)                                                                                                                                                                                                                    agccccGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGtt                                                                                                       <  2:132112/128‑1 (MQ=255)                                                                                                                                                                                                                    agccccGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAAccc                                                                     <  2:703362/162‑1 (MQ=255)                                                                                                                                                                                                                             cctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATc                                                                                                                                                      <  2:236335‑M1/65‑1 (MQ=255)                                                                                                                                                                                                                             cctcaatggCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATc                                                                                                                                                      >  1:236337‑M1/10‑74 (MQ=255)                                                                                                                                                                                                                                   aaTCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGc             <  2:314974/205‑1 (MQ=255)                                                                                                                                                                                                                                      |                                                                                                                                                                                                                     CGCGACACACCAGCCAGCACCTTTCGCTGTGCTTCATCCAGCTCCGCGATATCCAACCGAAGGCCGCATAAGAGATCTACGACCTTAGCGAGGCAAGCGTACTGCCGGGCCACTCGAAAGAGGGAGATCGCAAAGCCCTCGAAAGGCTGAAGTTTCAGAACTCCACCCCGAAAGTTTCGGAACTCTTGCCTTTTTTCGACCCATAAAGAAAAACCCCGCAGACGTTAATCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGATACAAGAATCGCCGCCTCATGCCTGCCGGAAGCAATAATCAGTTCCAAAACGAAGCGGGATTTACACGCCTGTAACCCGCATTCTACAAGGGTCGATTAAAAAGTTTTGGAACTGATTTTCGGGCCTTTTTTGCCCACCTTCCAG  >  AE015451/4371379‑4371820

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.