New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	4371608 =	54 (1.240)	3 (0.110)	3/208	NT	8.7%	intergenic (‑193/‑1379)	PP_5636/PP_3849	protein of unknown function/putative calcium‑binding protein, hemolysin‑type
	?	AE015451	= 4427498	30 (1.130)					intergenic (+82/+20)	PP_3920/PP_t61	putative Phage integrase/tRNA‑Cys

CAGTTCCGCGACATCCGACCGAAGGCGGCCTCGGAGATCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCTTCATTCTTTTAACCTTGCAACCCCCTGAACGAAAAAAAATTT  >  AE015451/4427276‑4427729                                                                                                                                                                                                                               |                                                                                                                                                                                                                                        cAGTTCCGCGACATCCGACCGAAGGCGGCCTCGGAGATCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATCAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttc                                                                                                                                                                                                                            >  1:300284‑M2/1‑223 (MQ=255)       cgcgACATCCGACCGAAGGCGGCCTCGGAGATCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatg                                                                                                                                                                                                                       <  1:480084‑M2/235‑19 (MQ=255)           aCATCCGACCGAAGGCGGCCTCGGAGATCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtgga                                                                                                                                                                                                                  <  1:749417‑M2/236‑24 (MQ=255)                               tCGGAGATCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaac                                                                                                                                                                                              <  1:742135‑M2/236‑44 (MQ=255)                                   agaTCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggc                                                                                                                                                                                          >  1:202550‑M2/1‑189 (MQ=255)                                      tCAACGACCTGAGCGGTGCAAGCGTTCTGCTGGGCCACTCAAAGGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGct                                                                                                                                                                                                                                       >  1:188027‑M2/1‑186 (MQ=255)                                          cGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccga                                                                                                                                                                                                            >  2:281645‑M2/1‑182 (MQ=255)                                            aCCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtaga                                                                                                                                                                                     >  2:697432‑M2/1‑180 (MQ=255)                                               tGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCCATGGctgcggggctttcgaatg                                                                                                                                                                                                                       <  2:51411‑M2/195‑19 (MQ=255)                                                  gCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgca                                                                                                                                                                           >  1:112215‑M2/1‑174 (MQ=255)                                                  gCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatg                                                                                                                                                                                                                       <  2:232556‑M2/192‑19 (MQ=255)                                                   cGATGCAAGCGTTCTGCTGGGCCACTCCAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaa                                                                                                                                                                          >  1:352564‑M2/1‑173 (MQ=255)                                                                ctgctgGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAg                                                                                                                                                                   <  1:603055/230‑1 (MQ=255)                                                                   ctgGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgta                                                                                                                                                                                       <  1:691641‑M2/207‑51 (MQ=255)                                                                   ctgGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCAc                                                                                                                                                          >  1:766656/1‑236 (MQ=255)                                                                      ggCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgt                                                                                                                                                                                        >  2:522621‑M2/1‑154 (MQ=255)                                                                      ggCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggcacaggtcggaatc                                                                                                                                                                                                  <  1:171‑M2/193‑40 (MQ=255)                                                                         cACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGc                                                                                                                                                     >  1:325332/1‑235 (MQ=255)                                                                              aaaaGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgca                                                                                                                                                                           <  2:331739‑M2/208‑63 (MQ=255)                                                                              aaaaGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacgga                                                                                                                                                                                 <  2:145926‑M2/202‑57 (MQ=255)                                                                              aaaaGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACt                                                                                                                                                 >  2:494589/1‑234 (MQ=255)                                                                              aaaaGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCg                                                                                                                                               >  1:343960/1‑236 (MQ=255)                                                                                   aagGAATCGCGGGGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCACCCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatc                                                                                                                                                                                                  >  2:137279‑M2/1‑141 (MQ=255)                                                                                   aagGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGc                                                                                                                                             <  2:677749/233‑1 (MQ=255)                                                                                   aagGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCt                                                                                                                                           <  1:341585/235‑1 (MQ=255)                                                                                           aCGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAAAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagac                                                                                                                                                                                    <  2:87113‑M2/186‑54 (MQ=255)                                                                                                   cgTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaa                                                                                                                                                                                               <  2:716635‑M2/167‑43 (MQ=255)                                                                                                    gTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAgct                                                                                                                         >  1:640045/1‑236 (MQ=255)                                                                                                                     ggCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatccgatacaagaatcgccgcctcatgcctgccggaagcaataatcagttccaaaacgaagcgggat                                                                                                        >  1:13615‑M2/1‑107 (MQ=255)                                                                                                                             ccAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCTCGCAAAGAAAAACCCCGCAACCTCAATTGctgcggggctttcg                                                                                                                                                                                                                           <  2:544797‑M2/113‑15 (MQ=255)                                                                                                                             ccAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaagggtggaggccgaggtcggaatcgaacc                                                                                                                                                                                             <  2:275453‑M2/143‑45 (MQ=255)                                                                                                                               aaGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggattt                                                                                                                                                                              >  2:737223‑M2/1‑97 (MQ=255)                                                                                                                                  ccTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCAt                                                                                                                                                                <  1:585162/167‑1 (MQ=255)                                                                                                                                   cTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatccgatacaagaatcgccgcctcatgcctgccggaagcaataatcagttccaaaacgaagcgggatttacacgcctgta                                                                                           >  1:331741‑M2/1‑93 (MQ=255)                                                                                                                                   cTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTa                                                                                                                                                   <  1:798953/179‑1 (MQ=255)                                                                                                                                               gaAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgatgtcggaatcgaaccggcgtagacggatttgca                                                                                                                                                                           >  2:721101‑M2/1‑81 (MQ=255)                                                                                                                                                aaGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagac                                                                                                                                                                                    <  2:36291‑M2/133‑54 (MQ=255)                                                                                                                                                   ttttGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCt                                                                                                                >  2:725960/1‑198 (MQ=255)                                                                                                                                                                ctcAATTGGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAATGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGa                                                             >  1:210989/1‑236 (MQ=255)                                                                                                                                                                ctcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatccg                                                                                                                                                                      >  2:474728‑M2/1‑64 (MQ=255)                                                                                                                                                                ctcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatccg                                                                                                                                                                      <  1:474730‑M2/131‑68 (MQ=255)                                                                                                                                                                ctcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatcc                                                                                                                                                                       <  2:61916‑M2/130‑67 (MQ=255)                                                                                                                                                                ctcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACGACTTTGCTACTCGGCCTCAAAGGTTGGATCTAGCTGCTTgcg                                                                                                                  >  1:479505/1‑183 (MQ=255)                                                                                                                                                                ctcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCggct                                                                                                                               >  2:242888/1‑168 (MQ=255)                                                                                                                                                                ctcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGa                                                             >  1:132457/1‑236 (MQ=255)                                                                                                                                                                 tcAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGAt                                                            <  1:91100/236‑1 (MQ=255)                                                                                                                                                                   aaTTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGAt                                                            <  2:480082/234‑1 (MQ=255)                                                                                                                                                                          tttGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAA‑CTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTg                                                                                          <  1:622407/196‑1 (MQ=255)                                                                                                                                                                           ttGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCAt                                                   >  1:441824/1‑235 (MQ=255)                                                                                                                                                                            tGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaat                                                                                                                                                                         <  2:516052‑M2/116‑65 (MQ=255)                                                                                                                                                                            tGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaat                                                                                                                                                                         >  1:516054‑M2/1‑52 (MQ=255)                                                                                                                                                                                 cTTCGTTGTTTTCCTGCGCGCAAACACAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGc                                                                                                            <  2:729101/172‑1 (MQ=255)                                                                                                                                                                                   tCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCt                                            <  1:625694/234‑1 (MQ=255)                                                                                                                                                                                    cGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCt                                            <  1:597003/233‑1 (MQ=255)                                                                                                                                                                                      gtgtTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCgg                                                                                                                                              >  2:38108/1‑133 (MQ=255)                                                                                                                                                                                         ttttCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCTTCATTCt                                     <  1:124348/235‑1 (MQ=255)                                                                                                                                                                                                        aGAAAAACCCCGCAACCTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatccgatacaagaatcgccgcctcatgcctgccggaagcaataatcagttccaaaacgaagcgggatttacacgcctgtaacccgcattctacaagggtcgattaaaaagttttggaactgattttcgggccttttttgcccaccttc                       <  2:540087‑M2/234‑211 (MQ=255)                                                                                                                                                                                                          aacagccccGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGa                                                             <  2:262100/189‑1 (MQ=255)                                                                                                                                                                                                             gaCCCCGCAGCCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGACCCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTcc                                                                                                     <  2:236738/150‑1 (MQ=255)                                                                                                                                                                                                              aCCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCtt                                           <  1:232558/208‑1 (MQ=255)                                                                                                                                                                                                                     aaCCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCttttt                                                                                 <  2:281946/163‑1 (MQ=255)                                                                                                                                                                                                                     aaCCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCttttt                                                                                 >  1:281948/1‑163 (MQ=255)                                                                                                                                                                                                                       ccTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatc                                                                                                                                                                        <  2:236335‑M2/74‑66 (MQ=255)                                                                                                                                                                                                                       ccTCAATGGctgcggggctttcgaatggtggaggccgaggtcggaatcgaaccggcgtagacggatttgcaatc                                                                                                                                                                        >  1:236337‑M2/1‑9 (MQ=255)                                                                                                                                                                                                                        cgcAATGGCTGCGGGGCTGTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGAt                                                            <  2:93589/179‑1 (MQ=255)                                                                                                                                                                                                                          cAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCTTCATTCTTTTAACCTTGCAAcccc                    >  1:271096/1‑219 (MQ=255)                                                                                                                                                                                                                           aaTGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAA‑CCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCTTCATTCTTTTAACCTTGCAACCCCCTGAACGAAAAAAAAttt  <  2:257724/235‑1 (MQ=255)                                                                                                                                                                                                                           aaTGGCTGCGGGGCTGTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCTCTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCt                                            <  2:163690/194‑1 (MQ=255)                                                                                                                                                                                                                            aTGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCTTCATTCTTTTAACCTTGCAACCCCCTGAACGAAAAAAAAtt   <  1:511544/234‑1 (MQ=255)                                                                                                                                                                                                                               |                                                                                                                                                                                                                                        CAGTTCCGCGACATCCGACCGAAGGCGGCCTCGGAGATCAACGACCTGAGCGATGCAAGCGTTCTGCTGGGCCACTCAAAAGAAGGAATCACGGAGCGCGTTTACCGACGCGTCGGGGCCATCGCCAAGCCTTCCAAATGATGAAGTTTTGGGACTGGTCTCAATTAGTTTTGGGACTTCGGTGTTTTCCTGCGCGCAAAGAAAAACCCCGCAACCTCAATGGCTGCGGGGCTTTCGAATGGTGGAGGCCGAGGTCGGAATCGAACCGGCGTAGACGGATTTGCAATCCGGAGCATAACCACTTTGCTACTCGGCCTCAAAGGTCGGATCTAGCTGCTTGCGCTTTGCTATCTCCTTGAAACGCTGAACCTTTTTCAAAGTTTGCTGCGTTTCGATGGGCGCCATTATGTCTTCATTCTTTTAACCTTGCAACCCCCTGAACGAAAAAAAATTT  >  AE015451/4427276‑4427729

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.