New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5299381 =	39 (0.890)	3 (0.070)	3/326	NT	7.7%	coding (721/2076 nt)	recD	ATP‑dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease
	?	AE015451	5299407 =	35 (0.840)					coding (695/2076 nt)	recD	ATP‑dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease

CAACGGCAACGGGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATGC  >  AE015451/5299157‑5299608                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                    caacggcaacggGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTgcagca                                                                                                                                                                                                                          >  1:634273/1‑236 (MQ=255)          cggGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTgc                                                                                                                                                                                                                              <  1:695/223‑1 (MQ=255)           gggTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCcagcag                                                                                                                                                                                                                >  1:741362/1‑236 (MQ=255)             gTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGgc                                                                                                                                                                                                              <  1:728488/236‑1 (MQ=255)                           ggCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACggtggt                                                                                                                                                                                                 <  1:778142/235‑1 (MQ=255)                                  gTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGAAGGCGCTCGACTTGCTGACCAATGGATTAGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCTCCACggtg                                                                                                                                                                                                   >  1:436057/1‑226 (MQ=255)                                                   ggcTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAg                                                                                                                                                                                      >  2:570065/1‑222 (MQ=255)                                                                       aCGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCg                                                                                                                                                      <  2:786201/234‑1 (MQ=255)                                                                             cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCCCCACggtgg                                                                                                                                                                                                  >  2:440328/1‑184 (MQ=255)                                                                             cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGcc                                                                                                                                                                                        >  2:167810/1‑194 (MQ=255)                                                                             cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGt                                                                                                                                              >  1:478565/1‑236 (MQ=255)                                                                             cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGt                                                                                                                                              >  1:630457/1‑236 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTgcagca                                                                                                                                                                                                                          >  2:569455/1‑149 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAgg                                                                                                                                                                                                               >  1:88502/1‑160 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAgg                                                                                                                                                                                                               <  2:88501/160‑1 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCg                                                                                                                                                                                 >  2:703824/1‑190 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCa                                                                                                                                                                        >  2:481624/1‑199 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGc                                                                                                                                     >  1:317389/1‑234 (MQ=255)                                                                                        ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAAAGCCAGCAGGCGCACCACGGTGgtcgt                                                                                                                                                                                              >  2:631998/1‑177 (MQ=255)                                                                                          ggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGaaa                                                                                                                                                         >  1:689884/1‑212 (MQ=255)                                                                                                  ccACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCCGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGGcagc                                                                                                                                                                                                                  >  2:181866/1‑147 (MQ=255)                                                                                                               cgcTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTcc                                                                                                               <  2:741360/233‑1 (MQ=255)                                                                                                                            gcgcTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGgcg                                                                                               <  1:15998/236‑1 (MQ=255)                                                                                                                                 cGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGGGATGATGc                                                                                                                                                              >  1:661507/1‑168 (MQ=255)                                                                                                                                     ttGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGccc                                                                                       <  1:167812/235‑1 (MQ=255)                                                                                                                                                                cgcAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGgcgcg                                                                                             <  2:634271/202‑1 (MQ=255)                                                                                                                                                                cgcAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGCCGTCTTGCCAGTAcc                                                                                                                                                                                  >  2:17949/1‑117 (MQ=255)                                                                                                                                                                   acccgtgccggtttcagcatcatcactggcggccccggtactggcaagacgaccaccgtggtGCGCCTGCAGCACCGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACgg                                                                                                                                                <  1:371576‑M1/86‑1 (MQ=255)                                                                                                                                                                   aGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAgcc                                                                    >  1:11025/1‑222 (MQ=255)                                                                                                                                                                   aGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAgg                                                         >  1:747729/1‑235 (MQ=255)                                                                                                                                                                    gCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAg                                                                                                                                       <  1:11026/156‑1 (MQ=255)                                                                                                                                                                     cGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGt                                                        <  2:549638/234‑1 (MQ=255)                                                                                                                                                                     cGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTACCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCTAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAATGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTc                                                       >  1:764325/1‑235 (MQ=255)                                                                                                                                                                                gtcggtGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACggtggt                                                                                                                                                                                                 <  2:302885/86‑1 (MQ=255)                                                                                                                                                                                gtcggtGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACggtggt                                                                                                                                                                                                 >  1:302887/1‑86 (MQ=255)                                                                                                                                                                                  ggcatcatcactggcggccccggtactggcaagacgaccaccgtggtGCGcc                                                                                                                                                                                                                                 >  2:739900‑M1/48‑52 (MQ=255)                                                                                                                                                                                          cactggcggccccggtactggcaagacgaccaccgtggtGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGGACCGGggccgccc                                                                                                                                                                        <  1:438816‑M1/62‑2 (MQ=255)                                                                                                                                                                                                 gATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAg                                                                                                                            >  2:77886/1‑138 (MQ=255)                                                                                                                                                                                                          tGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGAc                                <  2:630455/221‑1 (MQ=255)                                                                                                                                                                                                                aagacgaccaccgtggtGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCCCGaa                                                                                  <  2:238121‑M1/148‑1 (MQ=255)                                                                                                                                                                                                                         cACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCg                                                                                                                                                                                 >  1:794282/1‑61 (MQ=255)                                                                                                                                                                                                                         cACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCg                                                                                                                                                                                 <  2:794280/61‑1 (MQ=255)                                                                                                                                                                                                                         cACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATgc  >  1:677180/1‑236 (MQ=255)                                                                                                                                                                                                                              ccGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCtt                                         >  2:598683/1‑192 (MQ=255)                                                                                                                                                                                                                              ccGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGa     >  1:534734/1‑228 (MQ=255)                                                                                                                                                                                                                                 GCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGGCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTcgagg   <  1:774134‑M1/227‑3 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                                    CAACGGCAACGGGTTGCCAGCATGATGGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATGC  >  AE015451/5299157‑5299608

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.