New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	AE015451	5299381 =	39 (0.890)	3 (0.070)	3/326	NT	7.7%	coding (721/2076 nt)	recD	ATP‑dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease
	?	AE015451	5299407 =	35 (0.840)					coding (695/2076 nt)	recD	ATP‑dependent DNA helicase and dsDNA/ssDNA exonuclease, ssDNA endonuclease

GGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTA  >  AE015451/5299183‑5299618                                                                                                                                                                                                                                 |                                                                                                                                                                                                                    ggCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACggtggt                                                                                                                                                                                                           <  1:778142/235‑1 (MQ=255)        gTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGAAGGCGCTCGACTTGCTGACCAATGGATTAGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCTCCACggtg                                                                                                                                                                                                             >  1:436057/1‑226 (MQ=255)                         ggcTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAg                                                                                                                                                                                                >  2:570065/1‑222 (MQ=255)                                             aCGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCg                                                                                                                                                                <  2:786201/234‑1 (MQ=255)                                                   cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCCCCACggtgg                                                                                                                                                                                                            >  2:440328/1‑184 (MQ=255)                                                   cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGcc                                                                                                                                                                                                  >  2:167810/1‑194 (MQ=255)                                                   cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGt                                                                                                                                                        >  1:478565/1‑236 (MQ=255)                                                   cTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGt                                                                                                                                                        >  1:630457/1‑236 (MQ=255)                                                              ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCg                                                                                                                                                                                           >  2:703824/1‑190 (MQ=255)                                                              ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCa                                                                                                                                                                                  >  2:481624/1‑199 (MQ=255)                                                              ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGc                                                                                                                                               >  1:317389/1‑234 (MQ=255)                                                              ggggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAAAGCCAGCAGGCGCACCACGGTGgtcgt                                                                                                                                                                                                        >  2:631998/1‑177 (MQ=255)                                                                ggATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGaaa                                                                                                                                                                   >  1:689884/1‑212 (MQ=255)                                                                             ttcgggggcggcgcgccagctggccaggtggactggcagaagctcgcctgtgccttggccacccgtgccggtttcagcatcatcactggcggccccggtactggcaagacgaccaccgtggtgcgcctgctggcgttgctgcaggcgcACCACGGTGGTCGTCtt                                                                                                                                                                                                     <  2:238121‑M2/17‑1 (MQ=255)                                                                                     cgcTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTcc                                                                                                                         <  2:741360/233‑1 (MQ=255)                                                                                                  gcgcTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGgcg                                                                                                         <  1:15998/236‑1 (MQ=255)                                                                                                       cGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGGGATGATGc                                                                                                                                                                        >  1:661507/1‑168 (MQ=255)                                                                                                           ttGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGccc                                                                                                 <  1:167812/235‑1 (MQ=255)                                                                                                                                      cgcAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGgcgcg                                                                                                       <  2:634271/202‑1 (MQ=255)                                                                                                                                      cgcAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGCCGTCTTGCCAGTAcc                                                                                                                                                                                            >  2:17949/1‑117 (MQ=255)                                                                                                                                         acccgtgccggtttcagcatcatcactggcggccccggtactggcaagacgaccaccgtggtGCGCCTGCAGCACCGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACgg                                                                                                                                                          <  1:371576‑M1/86‑1 (MQ=255)                                                                                                                                         aGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAgcc                                                                              >  1:11025/1‑222 (MQ=255)                                                                                                                                         aGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAgg                                                                   >  1:747729/1‑235 (MQ=255)                                                                                                                                          gCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAg                                                                                                                                                 <  1:11026/156‑1 (MQ=255)                                                                                                                                           ccgtgccggtttcagcatcatcactggcggccccggtactggcaagacgaccaccgtggtgcgcctgctggcggtgctgcaggcgcACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGt                                                                                                                                                        <  1:371576‑M2/62‑1 (MQ=255)                                                                                                                                           cGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGt                                                                  <  2:549638/234‑1 (MQ=255)                                                                                                                                           cGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTACCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCTAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAATGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTc                                                                 >  1:764325/1‑235 (MQ=255)                                                                                                                                                      gtcggtGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACggtggt                                                                                                                                                                                                           >  1:302887/1‑86 (MQ=255)                                                                                                                                                      gtcggtGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACggtggt                                                                                                                                                                                                           <  2:302885/86‑1 (MQ=255)                                                                                                                                                                cactggcggccccggtactggcaagacgaccaccgtggtGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGGACCGGggccgccc                                                                                                                                                                                  <  1:438816‑M1/62‑2 (MQ=255)                                                                                                                                                                   gggcggccccggtcctggcaagacgaccaccgtggtgcgcctgctggcgttgctgcaggcgcACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGtg                                                                                                                                                                               <  1:438816‑M2/39‑1 (MQ=255)                                                                                                                                                                       gATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAg                                                                                                                                      >  2:77886/1‑138 (MQ=255)                                                                                                                                                                                tGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGAc                                          <  2:630455/221‑1 (MQ=255)                                                                                                                                                                                      aagacgaccaccgtggtGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCCCGaa                                                                                            <  2:238121‑M1/148‑1 (MQ=255)                                                                                                                                                                                               cACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCg                                                                                                                                                                                           >  1:794282/1‑61 (MQ=255)                                                                                                                                                                                               cACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCg                                                                                                                                                                                           <  2:794280/61‑1 (MQ=255)                                                                                                                                                                                               cACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATgc            >  1:677180/1‑236 (MQ=255)                                                                                                                                                                                                    ccGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCtt                                                   >  2:598683/1‑192 (MQ=255)                                                                                                                                                                                                    ccGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGa               >  1:534734/1‑228 (MQ=255)                                                                                                                                                                                                       GCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGGCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTcgagg             <  1:774134‑M1/227‑3 (MQ=255)                                                                                                                                                                                                         GCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCCGCCGCTCTgg                                                                       <  2:127989‑M1/167‑1 (MQ=255)                                                                                                                                                                                                         GCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTa  <  1:474963‑M1/236‑1 (MQ=255)                                                                                                                                                                                                                gcaACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATg             >  2:272169/1‑218 (MQ=255)                                                                                                                                                                                                                   aCGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCCCCAGACGCTCTGGCAGGTCCGCAGGCGGTGc                                                     >  1:626112/1‑175 (MQ=255)                                                                                                                                                                                                                            ggcgcACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATgcc                                                                                                                                                                       >  2:739900‑M2/6‑51 (MQ=255)                                                                                                                                                                                                                                 |                                                                                                                                                                                                                    GGCGAAAGTGCCGCGAGCCCGGGCGGCTGCCGAGCAGGCGATGCACGGTGCTGACTTCAGTGGGGATTTGCCCACGTACTTCGGCGCTGACTTGCAGGCGCTCGACTTGCTGACCAATGGATTCGGTCAGGCGCGCAGCGGCTTTGCCGGTCGGTGCAGCCAGGCGGATGCGCAGTGGCCTGCCCTGCTCCACTGCCGGCGCCTGCAGCAACGCCAGCAGGCGCACCACGGTGGTCGTCTTGCCAGTACCGGGGCCGCCAGTGATGATGCTGAAACCGGCACGGGTGGCCAAGGCACAGGCGAGCTTCTGCCAGTCCACCTGGCCAGCTGGCGCGCCGCCCTCGAACAGTTGCGCCAGACGCTCTGGCAGGTCCGCAGGCGGTGCTTCGGCCTGACTCAGGCGCTGGCGCAGGGCCTGGTCGATGCGCCGCTCGTA  >  AE015451/5299183‑5299618

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.